RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 ADD3Q9UEY8 706 aaKnown RBP19.91■□□□□ 0.78
TRAPPC3-207ENST00000497251 GNEQ9Y223 722 aaKnown RBP19.91■□□□□ 0.78
TRAPPC3-207ENST00000497251 MCM3APO60318 1980 aa19.91■□□□□ 0.78
TRAPPC3-207ENST00000497251 CTAGE5O15320 804 aa19.9■□□□□ 0.78
TRAPPC3-207ENST00000497251 ADCY6O43306 1168 aa19.9■□□□□ 0.78
TRAPPC3-207ENST00000497251 CD4P01730 458 aa19.9■□□□□ 0.78
TRAPPC3-207ENST00000497251 ICAM1P05362 532 aa19.9■□□□□ 0.78
TRAPPC3-207ENST00000497251 ALAS1P13196 640 aa19.9■□□□□ 0.78
TRAPPC3-207ENST00000497251 DNAJB2P25686 324 aa19.9■□□□□ 0.78
TRAPPC3-207ENST00000497251 RASIP1Q5U651 963 aa19.9■□□□□ 0.78
TRAPPC3-207ENST00000497251 BTNL9Q6UXG8 535 aa19.9■□□□□ 0.78
TRAPPC3-207ENST00000497251 NOL8Q76FK4 1167 aaKnown RBP19.9■□□□□ 0.78
TRAPPC3-207ENST00000497251 MORC4Q8TE76 937 aa19.9■□□□□ 0.78
TRAPPC3-207ENST00000497251 SYMPKQ92797 1274 aaKnown RBP19.9■□□□□ 0.78
TRAPPC3-207ENST00000497251 MAF1Q9H063 256 aa19.9■□□□□ 0.78
TRAPPC3-207ENST00000497251 IL17RBQ9NRM6 502 aa19.9■□□□□ 0.78
TRAPPC3-207ENST00000497251 CYP39A1Q9NYL5 469 aa19.9■□□□□ 0.78
TRAPPC3-207ENST00000497251 PRR12Q9ULL5 1215 aa19.9■□□□□ 0.78
TRAPPC3-207ENST00000497251 SOWAHBA6NEL2 793 aa19.89■□□□□ 0.77
TRAPPC3-207ENST00000497251 RANBP6O60518 1105 aaKnown RBP19.89■□□□□ 0.77
TRAPPC3-207ENST00000497251 AAMPQ13685 434 aa19.89■□□□□ 0.77
TRAPPC3-207ENST00000497251 FSCN1Q16658 493 aaKnown RBP19.89■□□□□ 0.77
TRAPPC3-207ENST00000497251 TLK2Q86UE8 772 aa19.89■□□□□ 0.77
TRAPPC3-207ENST00000497251 MYLIPQ8WY64 445 aa19.89■□□□□ 0.77
TRAPPC3-207ENST00000497251 TTC14Q96N46 770 aa19.89■□□□□ 0.77
TRAPPC3-207ENST00000497251 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.89■□□□□ 0.771e-7■■■■■ 27.7
TRAPPC3-207ENST00000497251 SALL3Q9BXA9 1300 aa19.89■□□□□ 0.77
TRAPPC3-207ENST00000497251 ZMYM6O95789 1325 aa19.88■□□□□ 0.77
TRAPPC3-207ENST00000497251 TOP1P11387 765 aaKnown RBP19.88■□□□□ 0.77
TRAPPC3-207ENST00000497251 TMEM240Q5SV17 173 aa19.88■□□□□ 0.77
TRAPPC3-207ENST00000497251 KCTD1Q719H9 257 aa19.88■□□□□ 0.77
TRAPPC3-207ENST00000497251 TIFAQ96CG3 184 aa19.88■□□□□ 0.77
TRAPPC3-207ENST00000497251 MPHOSPH6Q99547 160 aaKnown RBP19.88■□□□□ 0.77
TRAPPC3-207ENST00000497251 ZNF576Q9H609 170 aa19.88■□□□□ 0.77
TRAPPC3-207ENST00000497251 CCPG1Q9ULG6 757 aa19.88■□□□□ 0.77
TRAPPC3-207ENST00000497251 FOXP2O15409 715 aa19.87■□□□□ 0.77
TRAPPC3-207ENST00000497251 ITGA7Q13683 1181 aa19.87■□□□□ 0.77
TRAPPC3-207ENST00000497251 MCMDC2Q4G0Z9 681 aa19.87■□□□□ 0.77
TRAPPC3-207ENST00000497251 OTUD7AQ8TE49 926 aaPredicted RBP19.87■□□□□ 0.77
TRAPPC3-207ENST00000497251 RANBP17Q9H2T7 1088 aaKnown RBP19.87■□□□□ 0.77
TRAPPC3-207ENST00000497251 IL23AQ9NPF7 189 aa19.87■□□□□ 0.77
TRAPPC3-207ENST00000497251 B4DLN1 442 aa19.86■□□□□ 0.77
TRAPPC3-207ENST00000497251 CSF2RAP15509 400 aa19.86■□□□□ 0.77
TRAPPC3-207ENST00000497251 MRPL12P52815 198 aaKnown RBP19.86■□□□□ 0.77
TRAPPC3-207ENST00000497251 CTDSPL2Q05D32 466 aa19.86■□□□□ 0.77
TRAPPC3-207ENST00000497251 HDAC1Q13547 482 aaPredicted RBP19.86■□□□□ 0.77
TRAPPC3-207ENST00000497251 RAB30Q15771 203 aa19.86■□□□□ 0.77
TRAPPC3-207ENST00000497251 ANKRD45Q5TZF3 282 aa19.86■□□□□ 0.77
TRAPPC3-207ENST00000497251 TAPT1Q6NXT6 567 aa19.86■□□□□ 0.77
TRAPPC3-207ENST00000497251 CXCL17Q6UXB2 119 aa19.86■□□□□ 0.77
TRAPPC3-207ENST00000497251 C16orf59Q7L2K0 433 aa19.86■□□□□ 0.77
TRAPPC3-207ENST00000497251 RPUSD2Q8IZ73 545 aaKnown RBP19.86■□□□□ 0.77
TRAPPC3-207ENST00000497251 HERVK_113Q902F9 699 aa19.86■□□□□ 0.77
TRAPPC3-207ENST00000497251 CDH23Q9H251 3354 aa19.86■□□□□ 0.77
TRAPPC3-207ENST00000497251 NCOR1O75376 2440 aa19.86■□□□□ 0.77
TRAPPC3-207ENST00000497251 DYNC1LI2O43237 492 aaPredicted RBP19.85■□□□□ 0.77
TRAPPC3-207ENST00000497251 FGAP02671 866 aa19.85■□□□□ 0.77
TRAPPC3-207ENST00000497251 SUPT20HL2P0C7V6 817 aa19.85■□□□□ 0.77
TRAPPC3-207ENST00000497251 SMPD1P17405 629 aa19.85■□□□□ 0.77
TRAPPC3-207ENST00000497251 PDE1AP54750 535 aa19.85■□□□□ 0.77
TRAPPC3-207ENST00000497251 MFAP1P55081 439 aaKnown RBP19.85■□□□□ 0.77
TRAPPC3-207ENST00000497251 CCDC96Q2M329 555 aa19.85■□□□□ 0.77
TRAPPC3-207ENST00000497251 DUSP28Q4G0W2 176 aa19.85■□□□□ 0.77
TRAPPC3-207ENST00000497251 NSMFQ6X4W1 530 aa19.85■□□□□ 0.77
TRAPPC3-207ENST00000497251 HIPK3Q9H422 1215 aa19.85■□□□□ 0.77
TRAPPC3-207ENST00000497251 POLR3EQ9NVU0 708 aa19.85■□□□□ 0.77
TRAPPC3-207ENST00000497251 PRUNE2Q8WUY3 3088 aa19.85■□□□□ 0.77
TRAPPC3-207ENST00000497251 ASTN1O14525 1302 aa19.84■□□□□ 0.77
TRAPPC3-207ENST00000497251 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.84■□□□□ 0.77
TRAPPC3-207ENST00000497251 FGBP02675 491 aa19.84■□□□□ 0.77
TRAPPC3-207ENST00000497251 BEX3Q00994 111 aa19.84■□□□□ 0.77
TRAPPC3-207ENST00000497251 GRIN2CQ14957 1233 aa19.84■□□□□ 0.77
TRAPPC3-207ENST00000497251 BRDTQ58F21 947 aaPredicted RBP19.84■□□□□ 0.77
TRAPPC3-207ENST00000497251 MUM1L1Q5H9M0 696 aa19.84■□□□□ 0.77
TRAPPC3-207ENST00000497251 SYDE2Q5VT97 1194 aa19.84■□□□□ 0.77
TRAPPC3-207ENST00000497251 ZNF365Q70YC5 407 aa19.84■□□□□ 0.77
TRAPPC3-207ENST00000497251 RNF41Q9H4P4 317 aaPredicted RBP19.84■□□□□ 0.77
TRAPPC3-207ENST00000497251 MSRAQ9UJ68 235 aa19.84■□□□□ 0.77
TRAPPC3-207ENST00000497251 RBM47A0AV96 593 aaKnown RBP19.83■□□□□ 0.77
TRAPPC3-207ENST00000497251 NKRFO15226 690 aaKnown RBP eCLIP19.83■□□□□ 0.77
TRAPPC3-207ENST00000497251 NMT2O60551 498 aa19.83■□□□□ 0.77
TRAPPC3-207ENST00000497251 KPNA6O60684 536 aa19.83■□□□□ 0.77
TRAPPC3-207ENST00000497251 PFKMP08237 780 aa19.83■□□□□ 0.77
TRAPPC3-207ENST00000497251 CPT1AP50416 773 aa19.83■□□□□ 0.77
TRAPPC3-207ENST00000497251 IRX5P78411 483 aaPredicted RBP19.83■□□□□ 0.77
TRAPPC3-207ENST00000497251 CCDC178Q5BJE1 867 aa19.83■□□□□ 0.77
TRAPPC3-207ENST00000497251 AKNAD1Q5T1N1 836 aa19.83■□□□□ 0.77
TRAPPC3-207ENST00000497251 KIAA1211Q6ZU35 1233 aa19.83■□□□□ 0.77
TRAPPC3-207ENST00000497251 DNERQ8NFT8 737 aa19.83■□□□□ 0.77
TRAPPC3-207ENST00000497251 YTHDC1Q96MU7 727 aaKnown RBP19.83■□□□□ 0.77
TRAPPC3-207ENST00000497251 GAS2L1Q99501 681 aaPredicted RBP19.83■□□□□ 0.77
TRAPPC3-207ENST00000497251 TOMM22Q9NS69 142 aa19.83■□□□□ 0.77
TRAPPC3-207ENST00000497251 VCANP13611 3396 aa19.83■□□□□ 0.76
TRAPPC3-207ENST00000497251 WDR19Q8NEZ3 1342 aa19.82■□□□□ 0.76
TRAPPC3-207ENST00000497251 RRP1P56182 461 aaKnown RBP19.82■□□□□ 0.76
TRAPPC3-207ENST00000497251 BAATQ14032 418 aaPredicted RBP19.82■□□□□ 0.76
TRAPPC3-207ENST00000497251 VPS53Q5VIR6 699 aa19.82■□□□□ 0.76
TRAPPC3-207ENST00000497251 RGS22Q8NE09 1264 aa19.82■□□□□ 0.76
TRAPPC3-207ENST00000497251 TMEM47Q9BQJ4 181 aa19.82■□□□□ 0.76
TRAPPC3-207ENST00000497251 PBX4Q9BYU1 374 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms