RNA–Protein interactions for RNA: ENST00000497069.2

PMF1-205, Transcript of polyamine modulated factor 1, humanhuman

TSL 3

Gene PMF1, Length 837 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-205ENST00000497069 MRPL11Q9Y3B7 192 aaKnown RBP18.31■□□□□ 0.52
PMF1-205ENST00000497069 TRIM17Q9Y577 477 aa18.31■□□□□ 0.52
PMF1-205ENST00000497069 PCDHA1Q9Y5I3 950 aa18.31■□□□□ 0.52
PMF1-205ENST00000497069 PTPREP23469 700 aa18.3■□□□□ 0.52
PMF1-205ENST00000497069 CTGFP29279 349 aa18.3■□□□□ 0.52
PMF1-205ENST00000497069 FUT2Q10981 343 aa18.3■□□□□ 0.52
PMF1-205ENST00000497069 NTRK3Q16288 839 aa18.3■□□□□ 0.52
PMF1-205ENST00000497069 HEATR3Q7Z4Q2 680 aa18.3■□□□□ 0.52
PMF1-205ENST00000497069 SOCS4Q8WXH5 440 aa18.3■□□□□ 0.52
PMF1-205ENST00000497069 DDX11Q96FC9 970 aa18.3■□□□□ 0.52
PMF1-205ENST00000497069 NUDT12Q9BQG2 462 aa18.3■□□□□ 0.52
PMF1-205ENST00000497069 RNF26Q9BY78 433 aaPredicted RBP18.3■□□□□ 0.52
PMF1-205ENST00000497069 COL11A1P12107 1806 aaPredicted RBP18.3■□□□□ 0.52
PMF1-205ENST00000497069 SLC15A5A6NIM6 579 aa18.29■□□□□ 0.52
PMF1-205ENST00000497069 PRPF3O43395 683 aaKnown RBP18.29■□□□□ 0.52
PMF1-205ENST00000497069 PPP1R11O60927 126 aaPredicted RBP18.29■□□□□ 0.52
PMF1-205ENST00000497069 PPFIA3O75145 1194 aa18.29■□□□□ 0.52
PMF1-205ENST00000497069 TAL1P17542 331 aaPredicted RBP18.29■□□□□ 0.52
PMF1-205ENST00000497069 CTU1Q7Z7A3 348 aaKnown RBP18.29■□□□□ 0.52
PMF1-205ENST00000497069 MCF2L2Q86YR7 1114 aa18.29■□□□□ 0.52
PMF1-205ENST00000497069 CCDC83Q8IWF9 413 aa18.29■□□□□ 0.52
PMF1-205ENST00000497069 ABRAQ8N0Z2 381 aa18.29■□□□□ 0.52
PMF1-205ENST00000497069 hCG_1984214I3L0E3 225 aa18.28■□□□□ 0.52
PMF1-205ENST00000497069 CD2BP2O95400 341 aaKnown RBP18.28■□□□□ 0.52
PMF1-205ENST00000497069 PRMT2P55345 433 aa18.28■□□□□ 0.52
PMF1-205ENST00000497069 MUM1L1Q5H9M0 696 aa18.28■□□□□ 0.52
PMF1-205ENST00000497069 NSMFQ6X4W1 530 aa18.28■□□□□ 0.52
PMF1-205ENST00000497069 OTOP1Q7RTM1 612 aa18.28■□□□□ 0.52
PMF1-205ENST00000497069 ZNF713Q8N859 430 aaPredicted RBP18.28■□□□□ 0.52
PMF1-205ENST00000497069 SLC5A4Q9NY91 659 aa18.28■□□□□ 0.52
PMF1-205ENST00000497069 SRRDQ9UH36 339 aa18.28■□□□□ 0.52
PMF1-205ENST00000497069 PFASO15067 1338 aa18.27■□□□□ 0.52
PMF1-205ENST00000497069 NFIBO00712 420 aa18.27■□□□□ 0.52
PMF1-205ENST00000497069 DEXIO95424 95 aa18.27■□□□□ 0.52
PMF1-205ENST00000497069 SCG2P13521 617 aa18.27■□□□□ 0.52
PMF1-205ENST00000497069 ADORA2AP29274 412 aa18.27■□□□□ 0.52
PMF1-205ENST00000497069 PRKCZQ05513 592 aa18.27■□□□□ 0.52
PMF1-205ENST00000497069 MAP2K5Q13163 448 aa18.27■□□□□ 0.52
PMF1-205ENST00000497069 GRB14Q14449 540 aa18.27■□□□□ 0.52
PMF1-205ENST00000497069 PFKFB3Q16875 520 aaPredicted RBP18.27■□□□□ 0.52
PMF1-205ENST00000497069 DPP9Q86TI2 863 aa18.27■□□□□ 0.52
PMF1-205ENST00000497069 TMX3Q96JJ7 454 aa18.27■□□□□ 0.52
PMF1-205ENST00000497069 PTPDC1A2A3K4 754 aa18.26■□□□□ 0.51
PMF1-205ENST00000497069 RGS2P41220 211 aa18.26■□□□□ 0.51
PMF1-205ENST00000497069 FLT3LGP49771 235 aa18.26■□□□□ 0.51
PMF1-205ENST00000497069 NAPAP54920 295 aa18.26■□□□□ 0.51
PMF1-205ENST00000497069 CAP1Q01518 475 aa18.26■□□□□ 0.51
PMF1-205ENST00000497069 MORN1Q5T089 497 aa18.26■□□□□ 0.51
PMF1-205ENST00000497069 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.26■□□□□ 0.51
PMF1-205ENST00000497069 RAET1EQ8TD07 263 aa18.26■□□□□ 0.51
PMF1-205ENST00000497069 CLEC4DQ8WXI8 215 aa18.26■□□□□ 0.51
PMF1-205ENST00000497069 WASF1Q92558 559 aa18.26■□□□□ 0.51
PMF1-205ENST00000497069 GPKOWQ92917 476 aaPredicted RBP eCLIP18.26■□□□□ 0.51
PMF1-205ENST00000497069 MAF1Q9H063 256 aa18.26■□□□□ 0.51
PMF1-205ENST00000497069 A1CFQ9NQ94 594 aaKnown RBP18.26■□□□□ 0.51
PMF1-205ENST00000497069 STK36Q9NRP7 1315 aa18.25■□□□□ 0.51
PMF1-205ENST00000497069 POTEB2H3BUK9 544 aa18.25■□□□□ 0.51
PMF1-205ENST00000497069 CFBP00751 764 aa18.25■□□□□ 0.51
PMF1-205ENST00000497069 CYP2B6P20813 491 aa18.25■□□□□ 0.51
PMF1-205ENST00000497069 WWC2Q6AWC2 1192 aa18.25■□□□□ 0.51
PMF1-205ENST00000497069 PPP1R18Q6NYC8 613 aa18.25■□□□□ 0.51
PMF1-205ENST00000497069 RNF207Q6ZRF8 634 aa18.25■□□□□ 0.51
PMF1-205ENST00000497069 HSCBQ8IWL3 235 aa18.25■□□□□ 0.51
PMF1-205ENST00000497069 RGS22Q8NE09 1264 aa18.25■□□□□ 0.51
PMF1-205ENST00000497069 NSUN7Q8NE18 718 aaKnown RBP18.25■□□□□ 0.51
PMF1-205ENST00000497069 CCDC12Q8WUD4 166 aaPredicted RBP18.25■□□□□ 0.51
PMF1-205ENST00000497069 LLPHQ9BRT6 129 aaKnown RBP18.25■□□□□ 0.51
PMF1-205ENST00000497069 BARHL2Q9NY43 387 aa18.25■□□□□ 0.51
PMF1-205ENST00000497069 CYP39A1Q9NYL5 469 aa18.25■□□□□ 0.51
PMF1-205ENST00000497069 ORC3Q9UBD5 711 aaPredicted RBP18.25■□□□□ 0.51
PMF1-205ENST00000497069 GJD2Q9UKL4 321 aa18.25■□□□□ 0.51
PMF1-205ENST00000497069 GABRQQ9UN88 632 aa18.25■□□□□ 0.51
PMF1-205ENST00000497069 CTDNEP1O95476 244 aa18.24■□□□□ 0.51
PMF1-205ENST00000497069 PGK2P07205 417 aa18.24■□□□□ 0.51
PMF1-205ENST00000497069 CALML3P27482 149 aa18.24■□□□□ 0.51
PMF1-205ENST00000497069 PKN1Q16512 942 aa18.24■□□□□ 0.51
PMF1-205ENST00000497069 PKN2Q16513 984 aaKnown RBP18.24■□□□□ 0.51
PMF1-205ENST00000497069 CUL5Q93034 780 aa18.24■□□□□ 0.51
PMF1-205ENST00000497069 GCOM1H8Y6P7 765 aaPredicted RBP18.23■□□□□ 0.51
PMF1-205ENST00000497069 K7ELQ4 463 aaPredicted RBP18.23■□□□□ 0.51
PMF1-205ENST00000497069 STXBP3O00186 592 aa18.23■□□□□ 0.51
PMF1-205ENST00000497069 POLR2MP0CAP2 368 aa18.23■□□□□ 0.51
PMF1-205ENST00000497069 XBP1P17861 261 aa18.23■□□□□ 0.51
PMF1-205ENST00000497069 ST3GAL1Q11201 340 aa18.23■□□□□ 0.51
PMF1-205ENST00000497069 IRF5Q13568 498 aa18.23■□□□□ 0.51
PMF1-205ENST00000497069 BAATQ14032 418 aaPredicted RBP18.23■□□□□ 0.51
PMF1-205ENST00000497069 SAMD3Q8N6K7 520 aa18.23■□□□□ 0.51
PMF1-205ENST00000497069 CCDC148Q8NFR7 591 aa18.23■□□□□ 0.51
PMF1-205ENST00000497069 USP6NLQ92738 828 aa18.23■□□□□ 0.51
PMF1-205ENST00000497069 SNX21Q969T3 373 aa18.23■□□□□ 0.51
PMF1-205ENST00000497069 APBA2Q99767 749 aa18.23■□□□□ 0.51
PMF1-205ENST00000497069 MAP3K20Q9NYL2 800 aaKnown RBP18.23■□□□□ 0.51
PMF1-205ENST00000497069 PTPN22Q9Y2R2 807 aa18.23■□□□□ 0.51
PMF1-205ENST00000497069 ZSWIM8A7E2V4 1837 aa18.23■□□□□ 0.51
PMF1-205ENST00000497069 MGAMO43451 1857 aa18.22■□□□□ 0.51
PMF1-205ENST00000497069 JAK2O60674 1132 aa18.22■□□□□ 0.51
PMF1-205ENST00000497069 HOXC6P09630 235 aa18.22■□□□□ 0.51
PMF1-205ENST00000497069 XRCC5P13010 732 aaKnown RBP18.22■□□□□ 0.51
PMF1-205ENST00000497069 RPS6P62753 249 aaKnown RBP18.22■□□□□ 0.51
PMF1-205ENST00000497069 HMGN5P82970 282 aaKnown RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms