RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 ADAMTS6Q9UKP5 1117 aa3.62□□□□□ -1.83
SNRNP48-202ENST00000496946 PPM1HQ9ULR3 514 aa3.62□□□□□ -1.83
SNRNP48-202ENST00000496946 ZNF652Q9Y2D9 606 aa3.62□□□□□ -1.83
SNRNP48-202ENST00000496946 IKBKGQ9Y6K9 419 aa3.62□□□□□ -1.83
SNRNP48-202ENST00000496946 KINO60870 393 aaKnown RBP3.62□□□□□ -1.83
SNRNP48-202ENST00000496946 DNAJC6O75061 913 aa3.62□□□□□ -1.83
SNRNP48-202ENST00000496946 LRRN2O75325 713 aa3.62□□□□□ -1.83
SNRNP48-202ENST00000496946 TRIM37O94972 964 aa3.62□□□□□ -1.83
SNRNP48-202ENST00000496946 FOSP01100 380 aaPredicted RBP3.62□□□□□ -1.83
SNRNP48-202ENST00000496946 PGRP06401 933 aa3.62□□□□□ -1.83
SNRNP48-202ENST00000496946 VCAM1P19320 739 aa3.62□□□□□ -1.83
SNRNP48-202ENST00000496946 RRM1P23921 792 aa3.62□□□□□ -1.83
SNRNP48-202ENST00000496946 HSD3B2P26439 372 aa3.62□□□□□ -1.83
SNRNP48-202ENST00000496946 SESN3P58005 492 aa3.62□□□□□ -1.83
SNRNP48-202ENST00000496946 IRX1P78414 480 aaPredicted RBP3.62□□□□□ -1.83
SNRNP48-202ENST00000496946 TRAF1Q13077 416 aa3.62□□□□□ -1.83
SNRNP48-202ENST00000496946 TMED1Q13445 227 aa3.62□□□□□ -1.83
SNRNP48-202ENST00000496946 BRD3Q15059 726 aa3.62□□□□□ -1.83
SNRNP48-202ENST00000496946 LONRF1Q17RB8 773 aa3.62□□□□□ -1.83
SNRNP48-202ENST00000496946 FILIP1LQ4L180 1135 aa3.62□□□□□ -1.83
SNRNP48-202ENST00000496946 SYCP2LQ5T4T6 812 aa3.62□□□□□ -1.83
SNRNP48-202ENST00000496946 CDC37L1Q7L3B6 337 aa3.62□□□□□ -1.83
SNRNP48-202ENST00000496946 KRT77Q7Z794 578 aa3.62□□□□□ -1.83
SNRNP48-202ENST00000496946 CDH24Q86UP0 819 aa3.62□□□□□ -1.83
SNRNP48-202ENST00000496946 NDUFAF2Q8N183 169 aa3.62□□□□□ -1.83
SNRNP48-202ENST00000496946 RNF214Q8ND24 703 aa3.62□□□□□ -1.83
SNRNP48-202ENST00000496946 SMARCC1Q92922 1105 aaPredicted RBP3.62□□□□□ -1.83
SNRNP48-202ENST00000496946 TNPO1Q92973 898 aaKnown RBP3.62□□□□□ -1.83
SNRNP48-202ENST00000496946 ACSF2Q96CM8 615 aaPredicted RBP3.62□□□□□ -1.83
SNRNP48-202ENST00000496946 BRINP2Q9C0B6 783 aa3.62□□□□□ -1.83
SNRNP48-202ENST00000496946 DEF6Q9H4E7 631 aa3.62□□□□□ -1.83
SNRNP48-202ENST00000496946 VEZTQ9HBM0 779 aa3.62□□□□□ -1.83
SNRNP48-202ENST00000496946 ETAA1Q9NY74 926 aa3.62□□□□□ -1.83
SNRNP48-202ENST00000496946 RABL2AQ9UBK7 228 aaPredicted RBP3.62□□□□□ -1.83
SNRNP48-202ENST00000496946 ITM2BQ9Y287 266 aa3.62□□□□□ -1.83
SNRNP48-202ENST00000496946 BTBD11A6QL63 1104 aa3.61□□□□□ -1.83
SNRNP48-202ENST00000496946 ZNF131P52739 623 aa3.61□□□□□ -1.83
SNRNP48-202ENST00000496946 ERVK-24P63145 666 aa3.61□□□□□ -1.83
SNRNP48-202ENST00000496946 POU5F1BQ06416 359 aa3.61□□□□□ -1.83
SNRNP48-202ENST00000496946 SEZ6Q53EL9 994 aa3.61□□□□□ -1.83
SNRNP48-202ENST00000496946 WWC2Q6AWC2 1192 aa3.61□□□□□ -1.83
SNRNP48-202ENST00000496946 ZNF746Q6NUN9 644 aaPredicted RBP3.61□□□□□ -1.83
SNRNP48-202ENST00000496946 PPP4R4Q6NUP7 873 aa3.61□□□□□ -1.83
SNRNP48-202ENST00000496946 PAOXQ6QHF9 649 aa3.61□□□□□ -1.83
SNRNP48-202ENST00000496946 SVIPQ8NHG7 77 aa3.61□□□□□ -1.83
SNRNP48-202ENST00000496946 DDX54Q8TDD1 881 aaKnown RBP3.61□□□□□ -1.83
SNRNP48-202ENST00000496946 IWS1Q96ST2 819 aa3.61□□□□□ -1.83
SNRNP48-202ENST00000496946 PIM2Q9P1W9 311 aa3.61□□□□□ -1.83
SNRNP48-202ENST00000496946 TJP2Q9UDY2 1190 aa3.61□□□□□ -1.83
SNRNP48-202ENST00000496946 ACAD8Q9UKU7 415 aa3.61□□□□□ -1.83
SNRNP48-202ENST00000496946 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.61□□□□□ -1.83
SNRNP48-202ENST00000496946 NINLQ9Y2I6 1382 aa3.61□□□□□ -1.83
SNRNP48-202ENST00000496946 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.61□□□□□ -1.83
SNRNP48-202ENST00000496946 CHURC1-FNTBB4DL54 471 aa3.61□□□□□ -1.83
SNRNP48-202ENST00000496946 OFD1O75665 1012 aa3.61□□□□□ -1.83
SNRNP48-202ENST00000496946 INHBEP58166 350 aa3.61□□□□□ -1.83
SNRNP48-202ENST00000496946 GABPB1Q06547 395 aaPredicted RBP3.61□□□□□ -1.83
SNRNP48-202ENST00000496946 TRIM29Q14134 588 aa3.61□□□□□ -1.83
SNRNP48-202ENST00000496946 MAPRE1Q15691 268 aaKnown RBP3.61□□□□□ -1.83
SNRNP48-202ENST00000496946 FXNQ16595 210 aa3.61□□□□□ -1.83
SNRNP48-202ENST00000496946 LCE3BQ5TA77 95 aa3.61□□□□□ -1.83
SNRNP48-202ENST00000496946 IQCEQ6IPM2 695 aa3.61□□□□□ -1.83
SNRNP48-202ENST00000496946 RUFY4Q6ZNE9 571 aa3.61□□□□□ -1.83
SNRNP48-202ENST00000496946 WAPLQ7Z5K2 1190 aa3.61□□□□□ -1.83
SNRNP48-202ENST00000496946 CLASRPQ8N2M8 674 aaKnown RBP3.61□□□□□ -1.83
SNRNP48-202ENST00000496946 ZNF296Q8WUU4 475 aaPredicted RBP3.61□□□□□ -1.83
SNRNP48-202ENST00000496946 VMP1Q96GC9 406 aa3.61□□□□□ -1.83
SNRNP48-202ENST00000496946 TMEM74Q96NL1 305 aa3.61□□□□□ -1.83
SNRNP48-202ENST00000496946 OSBPL2Q9H1P3 480 aa3.61□□□□□ -1.83
SNRNP48-202ENST00000496946 ATXN3LQ9H3M9 355 aa3.61□□□□□ -1.83
SNRNP48-202ENST00000496946 GSX1Q9H4S2 264 aaPredicted RBP3.61□□□□□ -1.83
SNRNP48-202ENST00000496946 CCSER2Q9H7U1 834 aa3.61□□□□□ -1.83
SNRNP48-202ENST00000496946 PLAGL2Q9UPG8 496 aa3.61□□□□□ -1.83
SNRNP48-202ENST00000496946 OAS3Q9Y6K5 1087 aaKnown RBP3.61□□□□□ -1.83
SNRNP48-202ENST00000496946 PLIN1O60240 522 aa3.6□□□□□ -1.83
SNRNP48-202ENST00000496946 PDGFRBP09619 1106 aa3.6□□□□□ -1.83
SNRNP48-202ENST00000496946 RPL17P18621 184 aaKnown RBP3.6□□□□□ -1.83
SNRNP48-202ENST00000496946 MCM4P33991 863 aa3.6□□□□□ -1.83
SNRNP48-202ENST00000496946 EIF4A3P38919 411 aaKnown RBP3.6□□□□□ -1.83
SNRNP48-202ENST00000496946 GALK1P51570 392 aa3.6□□□□□ -1.83
SNRNP48-202ENST00000496946 MECOMQ03112 1051 aa3.6□□□□□ -1.83
SNRNP48-202ENST00000496946 SNW1Q13573 536 aaKnown RBP3.6□□□□□ -1.83
SNRNP48-202ENST00000496946 SNAP47Q5SQN1 464 aa3.6□□□□□ -1.83
SNRNP48-202ENST00000496946 C10orf62Q5T681 223 aaPredicted RBP3.6□□□□□ -1.83
SNRNP48-202ENST00000496946 WFDC3Q8IUB2 231 aa3.6□□□□□ -1.83
SNRNP48-202ENST00000496946 RELL1Q8IUW5 271 aa3.6□□□□□ -1.83
SNRNP48-202ENST00000496946 KIAA1958Q8N8K9 716 aa3.6□□□□□ -1.83
SNRNP48-202ENST00000496946 NEK9Q8TD19 979 aa3.6□□□□□ -1.83
SNRNP48-202ENST00000496946 CENPTQ96BT3 561 aa3.6□□□□□ -1.83
SNRNP48-202ENST00000496946 RUNDC1Q96C34 613 aa3.6□□□□□ -1.83
SNRNP48-202ENST00000496946 CDHR1Q96JP9 859 aa3.6□□□□□ -1.83
SNRNP48-202ENST00000496946 GBP4Q96PP9 640 aa3.6□□□□□ -1.83
SNRNP48-202ENST00000496946 IER2Q9BTL4 223 aa3.6□□□□□ -1.83
SNRNP48-202ENST00000496946 TRIM6Q9C030 488 aaPredicted RBP3.6□□□□□ -1.83
SNRNP48-202ENST00000496946 AS3MTQ9HBK9 375 aa3.6□□□□□ -1.83
SNRNP48-202ENST00000496946 ZFP64Q9NPA5 681 aa3.6□□□□□ -1.83
SNRNP48-202ENST00000496946 CCDC39Q9UFE4 941 aa3.6□□□□□ -1.83
SNRNP48-202ENST00000496946 MAFFQ9ULX9 164 aa3.6□□□□□ -1.83
SNRNP48-202ENST00000496946 CYP8B1Q9UNU6 501 aa3.6□□□□□ -1.83
SNRNP48-202ENST00000496946 LEMD3Q9Y2U8 911 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms