RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 ENPP3O14638 875 aa4.91□□□□□ -1.62
EXOSC3-208ENST00000496910 CYP26A1O43174 497 aa4.91□□□□□ -1.62
EXOSC3-208ENST00000496910 PRNPP04156 253 aa4.91□□□□□ -1.62
EXOSC3-208ENST00000496910 ANKRD39Q53RE8 183 aa4.91□□□□□ -1.62
EXOSC3-208ENST00000496910 C6orf15Q6UXA7 325 aaPredicted RBP4.91□□□□□ -1.62
EXOSC3-208ENST00000496910 SMC5Q8IY18 1101 aa4.91□□□□□ -1.62
EXOSC3-208ENST00000496910 EVI5LQ96CN4 794 aa4.91□□□□□ -1.62
EXOSC3-208ENST00000496910 GPR62Q9BZJ7 368 aa4.91□□□□□ -1.62
EXOSC3-208ENST00000496910 KLHL25Q9H0H3 589 aa4.91□□□□□ -1.62
EXOSC3-208ENST00000496910 LRRC4CQ9HCJ2 640 aa4.91□□□□□ -1.62
EXOSC3-208ENST00000496910 DDX56Q9NY93 547 aaKnown RBP4.91□□□□□ -1.62
EXOSC3-208ENST00000496910 TRPC5Q9UL62 973 aaPredicted RBP4.91□□□□□ -1.62
EXOSC3-208ENST00000496910 MYOM1P52179 1685 aa4.9□□□□□ -1.62
EXOSC3-208ENST00000496910 RICTORQ6R327 1708 aa4.9□□□□□ -1.62
EXOSC3-208ENST00000496910 WASH4PA8MWX3 477 aa4.9□□□□□ -1.63
EXOSC3-208ENST00000496910 U2SURPO15042 1029 aaKnown RBP4.9□□□□□ -1.63
EXOSC3-208ENST00000496910 FOXN1O15353 648 aa4.9□□□□□ -1.63
EXOSC3-208ENST00000496910 ADAMTS4O75173 837 aa4.9□□□□□ -1.63
EXOSC3-208ENST00000496910 GJB6O95452 261 aa4.9□□□□□ -1.63
EXOSC3-208ENST00000496910 CBX7O95931 251 aa4.9□□□□□ -1.63
EXOSC3-208ENST00000496910 CAPNS1P04632 268 aa4.9□□□□□ -1.63
EXOSC3-208ENST00000496910 RNF4P78317 190 aa4.9□□□□□ -1.63
EXOSC3-208ENST00000496910 AUHQ13825 339 aaKnown RBP4.9□□□□□ -1.63
EXOSC3-208ENST00000496910 RASA3Q14644 834 aa4.9□□□□□ -1.63
EXOSC3-208ENST00000496910 PPP2R5EQ16537 467 aa4.9□□□□□ -1.63
EXOSC3-208ENST00000496910 GAB4Q2WGN9 574 aa4.9□□□□□ -1.63
EXOSC3-208ENST00000496910 DCAF15Q66K64 600 aa4.9□□□□□ -1.63
EXOSC3-208ENST00000496910 TMC3Q7Z5M5 1100 aa4.9□□□□□ -1.63
EXOSC3-208ENST00000496910 APBB1IPQ7Z5R6 666 aaPredicted RBP4.9□□□□□ -1.63
EXOSC3-208ENST00000496910 DTX1Q86Y01 620 aa4.9□□□□□ -1.63
EXOSC3-208ENST00000496910 FAM178BQ8IXR5 827 aa4.9□□□□□ -1.63
EXOSC3-208ENST00000496910 PIWIL2Q8TC59 973 aaKnown RBP4.9□□□□□ -1.63
EXOSC3-208ENST00000496910 NETO1Q8TDF5 533 aa4.9□□□□□ -1.63
EXOSC3-208ENST00000496910 SMARCC1Q92922 1105 aaPredicted RBP4.9□□□□□ -1.63
EXOSC3-208ENST00000496910 MRFAP1L1Q96HT8 127 aa4.9□□□□□ -1.63
EXOSC3-208ENST00000496910 DHRS1Q96LJ7 313 aa4.9□□□□□ -1.63
EXOSC3-208ENST00000496910 RNPC3Q96LT9 517 aaKnown RBP4.9□□□□□ -1.63
EXOSC3-208ENST00000496910 PRDM14Q9GZV8 571 aa4.9□□□□□ -1.63
EXOSC3-208ENST00000496910 ADAMTS12P58397 1594 aa4.9□□□□□ -1.63
EXOSC3-208ENST00000496910 DNAJC6O75061 913 aa4.89□□□□□ -1.63
EXOSC3-208ENST00000496910 ITIH2P19823 946 aa4.89□□□□□ -1.63
EXOSC3-208ENST00000496910 CYP7A1P22680 504 aa4.89□□□□□ -1.63
EXOSC3-208ENST00000496910 CLCN7P51798 805 aa4.89□□□□□ -1.63
EXOSC3-208ENST00000496910 AMPD3Q01432 767 aa4.89□□□□□ -1.63
EXOSC3-208ENST00000496910 SLC7A5Q01650 507 aa4.89□□□□□ -1.63
EXOSC3-208ENST00000496910 NFE2L2Q16236 605 aa4.89□□□□□ -1.63
EXOSC3-208ENST00000496910 IFI16Q16666 785 aaKnown RBP4.89□□□□□ -1.63
EXOSC3-208ENST00000496910 LARP1BQ659C4 914 aaKnown RBP4.89□□□□□ -1.63
EXOSC3-208ENST00000496910 VHLLQ6RSH7 139 aa4.89□□□□□ -1.63
EXOSC3-208ENST00000496910 CKAP2LQ8IYA6 745 aa4.89□□□□□ -1.63
EXOSC3-208ENST00000496910 C7orf61Q8IZ16 206 aa4.89□□□□□ -1.63
EXOSC3-208ENST00000496910 HAUS7Q99871 368 aa4.89□□□□□ -1.63
EXOSC3-208ENST00000496910 HDAC8Q9BY41 377 aa4.89□□□□□ -1.63
EXOSC3-208ENST00000496910 ZNF451Q9Y4E5 1061 aa4.89□□□□□ -1.63
EXOSC3-208ENST00000496910 WIZO95785 1651 aa4.89□□□□□ -1.63
EXOSC3-208ENST00000496910 ADAMTS7Q9UKP4 1686 aa4.89□□□□□ -1.63
EXOSC3-208ENST00000496910 ZFYVE16Q7Z3T8 1539 aa4.88□□□□□ -1.63
EXOSC3-208ENST00000496910 DLC1Q96QB1 1528 aa4.88□□□□□ -1.63
EXOSC3-208ENST00000496910 CEP170BQ9Y4F5 1589 aaPredicted RBP4.88□□□□□ -1.63
EXOSC3-208ENST00000496910 TOMM70O94826 608 aa4.88□□□□□ -1.63
EXOSC3-208ENST00000496910 S100BP04271 92 aaPredicted RBP4.88□□□□□ -1.63
EXOSC3-208ENST00000496910 EPHX1P07099 455 aa4.88□□□□□ -1.63
EXOSC3-208ENST00000496910 CTSKP43235 329 aa4.88□□□□□ -1.63
EXOSC3-208ENST00000496910 NCAPHQ15003 741 aa4.88□□□□□ -1.63
EXOSC3-208ENST00000496910 FXNQ16595 210 aa4.88□□□□□ -1.63
EXOSC3-208ENST00000496910 BBS9Q3SYG4 887 aa4.88□□□□□ -1.63
EXOSC3-208ENST00000496910 GNPTABQ3T906 1256 aa4.88□□□□□ -1.63
EXOSC3-208ENST00000496910 PLEKHG4Q58EX7 1191 aa4.88□□□□□ -1.63
EXOSC3-208ENST00000496910 KIAA1211LQ6NV74 962 aa4.88□□□□□ -1.63
EXOSC3-208ENST00000496910 TEX2Q8IWB9 1127 aa4.88□□□□□ -1.63
EXOSC3-208ENST00000496910 CCDC146Q8IYE0 955 aa4.88□□□□□ -1.63
EXOSC3-208ENST00000496910 HSPA12BQ96MM6 686 aa4.88□□□□□ -1.63
EXOSC3-208ENST00000496910 MKRN2Q9H000 416 aaKnown RBP4.88□□□□□ -1.63
EXOSC3-208ENST00000496910 SPC25Q9HBM1 224 aa4.88□□□□□ -1.63
EXOSC3-208ENST00000496910 GP6Q9HCN6 339 aa4.88□□□□□ -1.63
EXOSC3-208ENST00000496910 FAM86C1Q9NVL1 165 aa4.88□□□□□ -1.63
EXOSC3-208ENST00000496910 PRR13Q9NZ81 148 aa4.88□□□□□ -1.63
EXOSC3-208ENST00000496910 APEX2Q9UBZ4 518 aa4.88□□□□□ -1.63
EXOSC3-208ENST00000496910 MINPP1Q9UNW1 487 aa4.88□□□□□ -1.63
EXOSC3-208ENST00000496910 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.88□□□□□ -1.63
EXOSC3-208ENST00000496910 DIP2AQ14689 1571 aa4.87□□□□□ -1.63
EXOSC3-208ENST00000496910 FAM221BA6H8Z2 402 aa4.87□□□□□ -1.63
EXOSC3-208ENST00000496910 GNAT3A8MTJ3 354 aa4.87□□□□□ -1.63
EXOSC3-208ENST00000496910 SIGLEC6O43699 453 aa4.87□□□□□ -1.63
EXOSC3-208ENST00000496910 COBLO75128 1261 aa4.87□□□□□ -1.63
EXOSC3-208ENST00000496910 PPFIA4O75335 1185 aa4.87□□□□□ -1.63
EXOSC3-208ENST00000496910 PRAMEF1O95521 474 aa4.87□□□□□ -1.63
EXOSC3-208ENST00000496910 TP53P04637 393 aaPredicted RBP4.87□□□□□ -1.63
EXOSC3-208ENST00000496910 CD247P20963 164 aa4.87□□□□□ -1.63
EXOSC3-208ENST00000496910 CD96P40200 585 aa4.87□□□□□ -1.63
EXOSC3-208ENST00000496910 TBX4P57082 545 aa4.87□□□□□ -1.63
EXOSC3-208ENST00000496910 ZNF445P59923 1031 aa4.87□□□□□ -1.63
EXOSC3-208ENST00000496910 NMIQ13287 307 aaPredicted RBP4.87□□□□□ -1.63
EXOSC3-208ENST00000496910 SLC10A6Q3KNW5 377 aa4.87□□□□□ -1.63
EXOSC3-208ENST00000496910 HSP90AB4PQ58FF6 505 aa4.87□□□□□ -1.63
EXOSC3-208ENST00000496910 INTS5Q6P9B9 1019 aaKnown RBP4.87□□□□□ -1.63
EXOSC3-208ENST00000496910 SPRED2Q7Z698 418 aa4.87□□□□□ -1.63
EXOSC3-208ENST00000496910 THAP5Q7Z6K1 395 aa4.87□□□□□ -1.63
EXOSC3-208ENST00000496910 FMNL3Q8IVF7 1028 aa4.87□□□□□ -1.63
EXOSC3-208ENST00000496910 CCDC144CPQ8IYA2 1237 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms