RNA–Protein interactions for RNA: ENST00000496633.1

CDHR3-214, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 949 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-214ENST00000496633 SLC4A3P48751 1232 aa8.84□□□□□ -0.99
CDHR3-214ENST00000496633 RCAN1P53805 252 aa8.84□□□□□ -0.99
CDHR3-214ENST00000496633 SEC23AQ15436 765 aa8.84□□□□□ -0.99
CDHR3-214ENST00000496633 PRPF38BQ5VTL8 546 aaKnown RBP8.84□□□□□ -0.99
CDHR3-214ENST00000496633 CCDC174Q6PII3 467 aa8.84□□□□□ -0.99
CDHR3-214ENST00000496633 RNF180Q86T96 592 aa8.84□□□□□ -0.99
CDHR3-214ENST00000496633 FBXO11Q86XK2 927 aa8.84□□□□□ -0.99
CDHR3-214ENST00000496633 NPLOC4Q8TAT6 608 aa8.84□□□□□ -0.99
CDHR3-214ENST00000496633 NEK1Q96PY6 1258 aa8.84□□□□□ -0.99
CDHR3-214ENST00000496633 AMNQ9BXJ7 453 aa8.84□□□□□ -0.99
CDHR3-214ENST00000496633 SEZ6LQ9BYH1 1024 aa8.84□□□□□ -0.99
CDHR3-214ENST00000496633 IL25Q9H293 177 aa8.84□□□□□ -0.99
CDHR3-214ENST00000496633 GPCPD1Q9NPB8 672 aa8.84□□□□□ -0.99
CDHR3-214ENST00000496633 FAM184BQ9ULE4 1060 aa8.84□□□□□ -0.99
CDHR3-214ENST00000496633 SLC12A7Q9Y666 1083 aa8.84□□□□□ -0.99
CDHR3-214ENST00000496633 TACC3Q9Y6A5 838 aa8.84□□□□□ -0.99
CDHR3-214ENST00000496633 ZNFX1Q9P2E3 1918 aaKnown RBP8.84□□□□□ -1
CDHR3-214ENST00000496633 ZNF536O15090 1300 aa8.83□□□□□ -1
CDHR3-214ENST00000496633 FRMPD2Q68DX3 1309 aaPredicted RBP8.83□□□□□ -1
CDHR3-214ENST00000496633 CCDC196A0A1B0GTZ2 297 aa8.83□□□□□ -1
CDHR3-214ENST00000496633 KBTBD13C9JR72 458 aa8.83□□□□□ -1
CDHR3-214ENST00000496633 DNM1LO00429 736 aa8.83□□□□□ -1
CDHR3-214ENST00000496633 PRC1O43663 620 aa8.83□□□□□ -1
CDHR3-214ENST00000496633 PEX10O60683 326 aa8.83□□□□□ -1
CDHR3-214ENST00000496633 CYBAP13498 195 aa8.83□□□□□ -1
CDHR3-214ENST00000496633 CYP2C19P33261 490 aa8.83□□□□□ -1
CDHR3-214ENST00000496633 FGD1P98174 961 aa8.83□□□□□ -1
CDHR3-214ENST00000496633 GRM4Q14833 912 aa8.83□□□□□ -1
CDHR3-214ENST00000496633 CCL14Q16627 93 aa8.83□□□□□ -1
CDHR3-214ENST00000496633 NFXL1Q6ZNB6 911 aa8.83□□□□□ -1
CDHR3-214ENST00000496633 RNF207Q6ZRF8 634 aa8.83□□□□□ -1
CDHR3-214ENST00000496633 CYB5R4Q7L1T6 521 aa8.83□□□□□ -1
CDHR3-214ENST00000496633 DHX32Q7L7V1 743 aaKnown RBP8.83□□□□□ -1
CDHR3-214ENST00000496633 SGMS1Q86VZ5 419 aa8.83□□□□□ -1
CDHR3-214ENST00000496633 MB21D2Q8IYB1 491 aaPredicted RBP8.83□□□□□ -1
CDHR3-214ENST00000496633 ADGRF4Q8IZF3 695 aa8.83□□□□□ -1
CDHR3-214ENST00000496633 AGBL1Q96MI9 1066 aa8.83□□□□□ -1
CDHR3-214ENST00000496633 A1CFQ9NQ94 594 aaKnown RBP8.83□□□□□ -1
CDHR3-214ENST00000496633 HOMER2Q9NSB8 354 aa8.83□□□□□ -1
CDHR3-214ENST00000496633 RBM28Q9NW13 759 aaKnown RBP8.83□□□□□ -1
CDHR3-214ENST00000496633 CYP39A1Q9NYL5 469 aa8.83□□□□□ -1
CDHR3-214ENST00000496633 SEC63Q9UGP8 760 aaKnown RBP8.83□□□□□ -1
CDHR3-214ENST00000496633 RIPK3Q9Y572 518 aa8.83□□□□□ -1
CDHR3-214ENST00000496633 PDE4DIPQ5VU43 2346 aa8.83□□□□□ -1
CDHR3-214ENST00000496633 PLXNA1Q9UIW2 1896 aa8.83□□□□□ -1
CDHR3-214ENST00000496633 PALM3A6NDB9 673 aaPredicted RBP8.82□□□□□ -1
CDHR3-214ENST00000496633 ZBTB5O15062 677 aa8.82□□□□□ -1
CDHR3-214ENST00000496633 ZEB2O60315 1214 aa8.82□□□□□ -1
CDHR3-214ENST00000496633 DUSP11O75319 330 aaKnown RBP8.82□□□□□ -1
CDHR3-214ENST00000496633 PGK2P07205 417 aa8.82□□□□□ -1
CDHR3-214ENST00000496633 SLC16A2P36021 539 aa8.82□□□□□ -1
CDHR3-214ENST00000496633 TROAPQ12815 778 aa8.82□□□□□ -1
CDHR3-214ENST00000496633 CDC37Q16543 378 aaPredicted RBP8.82□□□□□ -1
CDHR3-214ENST00000496633 BRDTQ58F21 947 aaPredicted RBP8.82□□□□□ -1
CDHR3-214ENST00000496633 TTBK2Q6IQ55 1244 aa8.82□□□□□ -1
CDHR3-214ENST00000496633 NSMFQ6X4W1 530 aa8.82□□□□□ -1
CDHR3-214ENST00000496633 UBE2Q1Q7Z7E8 422 aa8.82□□□□□ -1
CDHR3-214ENST00000496633 FAM133AQ8N9E0 248 aa8.82□□□□□ -1
CDHR3-214ENST00000496633 PCSK9Q8NBP7 692 aaKnown RBP8.82□□□□□ -1
CDHR3-214ENST00000496633 IL27Q8NEV9 243 aa8.82□□□□□ -1
CDHR3-214ENST00000496633 IGDCC4Q8TDY8 1250 aa8.82□□□□□ -1
CDHR3-214ENST00000496633 DPF3Q92784 378 aa8.82□□□□□ -1
CDHR3-214ENST00000496633 IWS1Q96ST2 819 aa8.82□□□□□ -1
CDHR3-214ENST00000496633 TSEN34Q9BSV6 310 aaKnown RBP8.82□□□□□ -1
CDHR3-214ENST00000496633 C11orf49Q9H6J7 331 aa8.82□□□□□ -1
CDHR3-214ENST00000496633 RIOX1Q9H6W3 641 aa8.82□□□□□ -1
CDHR3-214ENST00000496633 VTA1Q9NP79 307 aa8.82□□□□□ -1
CDHR3-214ENST00000496633 RBM27Q9P2N5 1060 aaKnown RBP8.82□□□□□ -1
CDHR3-214ENST00000496633 Q9Y3F1 56 aa8.82□□□□□ -1
CDHR3-214ENST00000496633 PNMA6FA0A0J9YX94 578 aa8.81□□□□□ -1
CDHR3-214ENST00000496633 PTPDC1A2A3K4 754 aa8.81□□□□□ -1
CDHR3-214ENST00000496633 MOXD2PA6NHM9 499 aa8.81□□□□□ -1
CDHR3-214ENST00000496633 NKRFO15226 690 aaKnown RBP eCLIP8.81□□□□□ -1
CDHR3-214ENST00000496633 EVI5O60447 810 aa8.81□□□□□ -1
CDHR3-214ENST00000496633 CCND3P30281 292 aaPredicted RBP8.81□□□□□ -1
CDHR3-214ENST00000496633 HSPA4P34932 840 aa8.81□□□□□ -1
CDHR3-214ENST00000496633 ACVR2BQ13705 512 aa8.81□□□□□ -1
CDHR3-214ENST00000496633 LHX8Q68G74 356 aa8.81□□□□□ -1
CDHR3-214ENST00000496633 IQSEC1Q6DN90 963 aa8.81□□□□□ -1
CDHR3-214ENST00000496633 BLOC1S2Q6QNY1 142 aa8.81□□□□□ -1
CDHR3-214ENST00000496633 ARMCX2Q7L311 632 aa8.81□□□□□ -1
CDHR3-214ENST00000496633 ZNF654Q8IZM8 581 aa8.81□□□□□ -1
CDHR3-214ENST00000496633 FBXL16Q8N461 479 aa8.81□□□□□ -1
CDHR3-214ENST00000496633 NSUN6Q8TEA1 469 aaKnown RBP8.81□□□□□ -1
CDHR3-214ENST00000496633 NUP133Q8WUM0 1156 aa8.81□□□□□ -1
CDHR3-214ENST00000496633 SHISA4Q96DD7 197 aa8.81□□□□□ -1
CDHR3-214ENST00000496633 RRP36Q96EU6 259 aaKnown RBP8.81□□□□□ -1
CDHR3-214ENST00000496633 SPZ1Q9BXG8 430 aa8.81□□□□□ -1
CDHR3-214ENST00000496633 GLT8D2Q9H1C3 349 aa8.81□□□□□ -1
CDHR3-214ENST00000496633 LY9Q9HBG7 655 aa8.81□□□□□ -1
CDHR3-214ENST00000496633 XPNPEP3Q9NQH7 507 aa8.81□□□□□ -1
CDHR3-214ENST00000496633 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.81□□□□□ -1
CDHR3-214ENST00000496633 FLRT1Q9NZU1 646 aa8.81□□□□□ -1
CDHR3-214ENST00000496633 MAD2L2Q9UI95 211 aa8.81□□□□□ -1
CDHR3-214ENST00000496633 hCG_1984214I3L0E3 225 aa8.8□□□□□ -1
CDHR3-214ENST00000496633 SH2B2O14492 632 aaPredicted RBP8.8□□□□□ -1
CDHR3-214ENST00000496633 STAM2O75886 525 aa8.8□□□□□ -1
CDHR3-214ENST00000496633 GOLGA8HP0CJ92 632 aa8.8□□□□□ -1
CDHR3-214ENST00000496633 RPS6P62753 249 aaKnown RBP8.8□□□□□ -1
CDHR3-214ENST00000496633 GHRHRQ02643 423 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms