RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 XBP1P17861 261 aa25.09■■□□□ 1.61
C9orf3-222ENST00000496567 WWC2Q6AWC2 1192 aa25.09■■□□□ 1.61
C9orf3-222ENST00000496567 NCAPG2Q86XI2 1143 aa25.09■■□□□ 1.61
C9orf3-222ENST00000496567 CHST13Q8NET6 341 aa25.09■■□□□ 1.61
C9orf3-222ENST00000496567 CCDC12Q8WUD4 166 aaPredicted RBP25.09■■□□□ 1.61
C9orf3-222ENST00000496567 GPKOWQ92917 476 aaPredicted RBP eCLIP25.09■■□□□ 1.61
C9orf3-222ENST00000496567 TRERF1Q96PN7 1200 aa25.09■■□□□ 1.61
C9orf3-222ENST00000496567 MROH8Q9H579 483 aa25.09■■□□□ 1.61
C9orf3-222ENST00000496567 RIPK3Q9Y572 518 aa25.09■■□□□ 1.61
C9orf3-222ENST00000496567 ERCC3P19447 782 aa25.08■■□□□ 1.61
C9orf3-222ENST00000496567 NOM1Q5C9Z4 860 aaKnown RBP25.08■■□□□ 1.61
C9orf3-222ENST00000496567 PPP1R18Q6NYC8 613 aa25.08■■□□□ 1.61
C9orf3-222ENST00000496567 ALG1Q9BT22 464 aa25.08■■□□□ 1.61
C9orf3-222ENST00000496567 SH3GLB2Q9NR46 395 aa25.08■■□□□ 1.61
C9orf3-222ENST00000496567 RNF146Q9NTX7 359 aa25.08■■□□□ 1.61
C9orf3-222ENST00000496567 CEP350Q5VT06 3117 aa25.08■■□□□ 1.61
C9orf3-222ENST00000496567 GJB2P29033 226 aa25.07■■□□□ 1.6
C9orf3-222ENST00000496567 MAPK4P31152 587 aa25.07■■□□□ 1.6
C9orf3-222ENST00000496567 NAPAP54920 295 aa25.07■■□□□ 1.6
C9orf3-222ENST00000496567 FAM177A1Q8N128 213 aaPredicted RBP25.07■■□□□ 1.6
C9orf3-222ENST00000496567 ACAD9Q9H845 621 aa25.07■■□□□ 1.6
C9orf3-222ENST00000496567 HOMER2Q9NSB8 354 aa25.07■■□□□ 1.6
C9orf3-222ENST00000496567 STXBP3O00186 592 aa25.06■■□□□ 1.6
C9orf3-222ENST00000496567 SP3Q02447 781 aa25.06■■□□□ 1.6
C9orf3-222ENST00000496567 CCDC148Q8NFR7 591 aa25.06■■□□□ 1.6
C9orf3-222ENST00000496567 PORCNQ9H237 461 aa25.06■■□□□ 1.6
C9orf3-222ENST00000496567 CWC22Q9HCG8 908 aaKnown RBP25.06■■□□□ 1.6
C9orf3-222ENST00000496567 GPR25O00155 361 aa25.05■■□□□ 1.6
C9orf3-222ENST00000496567 MCF2L2Q86YR7 1114 aa25.05■■□□□ 1.6
C9orf3-222ENST00000496567 MAF1Q9H063 256 aa25.05■■□□□ 1.6
C9orf3-222ENST00000496567 EFCC1Q9HA90 598 aa25.05■■□□□ 1.6
C9orf3-222ENST00000496567 TAL1P17542 331 aaPredicted RBP25.05■■□□□ 1.6
C9orf3-222ENST00000496567 WDR78Q5VTH9 848 aa25.05■■□□□ 1.6
C9orf3-222ENST00000496567 AIFM3Q96NN9 605 aa25.05■■□□□ 1.6
C9orf3-222ENST00000496567 FOXD4L1Q9NU39 408 aa25.05■■□□□ 1.6
C9orf3-222ENST00000496567 VPS54Q9P1Q0 977 aa25.05■■□□□ 1.6
C9orf3-222ENST00000496567 TRIM29Q14134 588 aa25.04■■□□□ 1.6
C9orf3-222ENST00000496567 KIF22Q14807 665 aa25.04■■□□□ 1.6
C9orf3-222ENST00000496567 MUM1L1Q5H9M0 696 aa25.04■■□□□ 1.6
C9orf3-222ENST00000496567 CLEC4DQ8WXI8 215 aa25.04■■□□□ 1.6
C9orf3-222ENST00000496567 GLT8D2Q9H1C3 349 aa25.04■■□□□ 1.6
C9orf3-222ENST00000496567 DAXXQ9UER7 740 aaPredicted RBP25.04■■□□□ 1.6
C9orf3-222ENST00000496567 SMCHD1A6NHR9 2005 aa25.03■■□□□ 1.6
C9orf3-222ENST00000496567 LACTBP83111 547 aaPredicted RBP25.03■■□□□ 1.6
C9orf3-222ENST00000496567 TYW1BQ6NUM6 668 aa25.03■■□□□ 1.6
C9orf3-222ENST00000496567 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.03■■□□□ 1.6
C9orf3-222ENST00000496567 SAMD3Q8N6K7 520 aa25.03■■□□□ 1.6
C9orf3-222ENST00000496567 RGS22Q8NE09 1264 aa25.03■■□□□ 1.6
C9orf3-222ENST00000496567 IVNS1ABPQ9Y6Y0 642 aa25.03■■□□□ 1.6
C9orf3-222ENST00000496567 PCNTO95613 3336 aa25.02■■□□□ 1.6
C9orf3-222ENST00000496567 ESYT2A0FGR8 921 aa25.02■■□□□ 1.6
C9orf3-222ENST00000496567 STRNO43815 780 aa25.02■■□□□ 1.6
C9orf3-222ENST00000496567 TEX2Q8IWB9 1127 aa25.02■■□□□ 1.6
C9orf3-222ENST00000496567 C8orf76Q96K31 380 aa25.02■■□□□ 1.6
C9orf3-222ENST00000496567 C6orf50Q9HD87 102 aa25.02■■□□□ 1.6
C9orf3-222ENST00000496567 SMCO2A6NFE2 343 aa25.01■■□□□ 1.59
C9orf3-222ENST00000496567 NFIBO00712 420 aa25.01■■□□□ 1.59
C9orf3-222ENST00000496567 FKTNO75072 461 aa25.01■■□□□ 1.59
C9orf3-222ENST00000496567 FCER1AP12319 257 aa25.01■■□□□ 1.59
C9orf3-222ENST00000496567 GNA11P29992 359 aa25.01■■□□□ 1.59
C9orf3-222ENST00000496567 NLRP5P59047 1200 aa25.01■■□□□ 1.59
C9orf3-222ENST00000496567 GPR142Q7Z601 462 aa25.01■■□□□ 1.59
C9orf3-222ENST00000496567 PLEKHH3Q7Z736 793 aa25.01■■□□□ 1.59
C9orf3-222ENST00000496567 SPRYD3Q8NCJ5 442 aa25.01■■□□□ 1.59
C9orf3-222ENST00000496567 CUL5Q93034 780 aa25.01■■□□□ 1.59
C9orf3-222ENST00000496567 ZMYND12Q9H0C1 365 aa25.01■■□□□ 1.59
C9orf3-222ENST00000496567 PSTPIP2Q9H939 334 aa25.01■■□□□ 1.59
C9orf3-222ENST00000496567 MAP3K20Q9NYL2 800 aaKnown RBP25.01■■□□□ 1.59
C9orf3-222ENST00000496567 PDCP20941 246 aa25.01■■□□□ 1.59
C9orf3-222ENST00000496567 CALML3P27482 149 aa25.01■■□□□ 1.59
C9orf3-222ENST00000496567 ADCY7P51828 1080 aa25.01■■□□□ 1.59
C9orf3-222ENST00000496567 MRPL12P52815 198 aaKnown RBP25.01■■□□□ 1.59
C9orf3-222ENST00000496567 FCGRTP55899 365 aa25.01■■□□□ 1.59
C9orf3-222ENST00000496567 KCTD2Q14681 263 aa25.01■■□□□ 1.59
C9orf3-222ENST00000496567 GALNT17Q6IS24 598 aa25.01■■□□□ 1.59
C9orf3-222ENST00000496567 NSMFQ6X4W1 530 aa25.01■■□□□ 1.59
C9orf3-222ENST00000496567 ABRAQ8N0Z2 381 aa25.01■■□□□ 1.59
C9orf3-222ENST00000496567 ANKRD35Q8N283 1001 aa25.01■■□□□ 1.59
C9orf3-222ENST00000496567 MMP19Q99542 508 aa25.01■■□□□ 1.59
C9orf3-222ENST00000496567 RIC8AQ9NPQ8 531 aa25.01■■□□□ 1.59
C9orf3-222ENST00000496567 TSKSQ9UJT2 592 aa25.01■■□□□ 1.59
C9orf3-222ENST00000496567 PFASO15067 1338 aa25.01■■□□□ 1.59
C9orf3-222ENST00000496567 OPLAHO14841 1288 aa25■■□□□ 1.59
C9orf3-222ENST00000496567 CFBP00751 764 aa25■■□□□ 1.59
C9orf3-222ENST00000496567 BICD2Q8TD16 824 aa25■■□□□ 1.59
C9orf3-222ENST00000496567 ERO1AQ96HE7 468 aa25■■□□□ 1.59
C9orf3-222ENST00000496567 GCOM1H8Y6P7 765 aaPredicted RBP24.99■■□□□ 1.59
C9orf3-222ENST00000496567 TNPO2O14787 897 aaKnown RBP24.99■■□□□ 1.59
C9orf3-222ENST00000496567 POLR2MP0CAP2 368 aa24.99■■□□□ 1.59
C9orf3-222ENST00000496567 PSMC4P43686 418 aa24.99■■□□□ 1.59
C9orf3-222ENST00000496567 GHRHRQ02643 423 aa24.99■■□□□ 1.59
C9orf3-222ENST00000496567 ARHGEF6Q15052 776 aa24.99■■□□□ 1.59
C9orf3-222ENST00000496567 LARP1BQ659C4 914 aaKnown RBP24.99■■□□□ 1.59
C9orf3-222ENST00000496567 RNF207Q6ZRF8 634 aa24.99■■□□□ 1.59
C9orf3-222ENST00000496567 ZNF296Q8WUU4 475 aaPredicted RBP24.99■■□□□ 1.59
C9orf3-222ENST00000496567 PHF20Q9BVI0 1012 aa24.99■■□□□ 1.59
C9orf3-222ENST00000496567 A1CFQ9NQ94 594 aaKnown RBP24.99■■□□□ 1.59
C9orf3-222ENST00000496567 PTPREP23469 700 aa24.98■■□□□ 1.59
C9orf3-222ENST00000496567 KRT40Q6A162 431 aa24.98■■□□□ 1.59
C9orf3-222ENST00000496567 FBXO18Q8NFZ0 1043 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms