RNA–Protein interactions for RNA: ENST00000496527.1

CHRD-217, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 588 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-217ENST00000496527 CALM3P0DP25 149 aa26.43■■□□□ 1.82
CHRD-217ENST00000496527 PSMA5P28066 241 aa26.43■■□□□ 1.82
CHRD-217ENST00000496527 QRICH1Q2TAL8 776 aa26.43■■□□□ 1.82
CHRD-217ENST00000496527 SYNE3Q6ZMZ3 975 aa26.43■■□□□ 1.82
CHRD-217ENST00000496527 ZNF467Q7Z7K2 595 aaPredicted RBP26.43■■□□□ 1.82
CHRD-217ENST00000496527 SGMS1Q86VZ5 419 aa26.43■■□□□ 1.82
CHRD-217ENST00000496527 NFIBO00712 420 aa26.42■■□□□ 1.82
CHRD-217ENST00000496527 CYBAP13498 195 aa26.42■■□□□ 1.82
CHRD-217ENST00000496527 FGD1P98174 961 aa26.42■■□□□ 1.82
CHRD-217ENST00000496527 BLOC1S2Q6QNY1 142 aa26.42■■□□□ 1.82
CHRD-217ENST00000496527 FBXO11Q86XK2 927 aa26.42■■□□□ 1.82
CHRD-217ENST00000496527 CRISPLD2Q9H0B8 497 aa26.42■■□□□ 1.82
CHRD-217ENST00000496527 RIOX1Q9H6W3 641 aa26.42■■□□□ 1.82
CHRD-217ENST00000496527 CYP39A1Q9NYL5 469 aa26.42■■□□□ 1.82
CHRD-217ENST00000496527 PLXNA1Q9UIW2 1896 aa26.41■■□□□ 1.82
CHRD-217ENST00000496527 EIF5BO60841 1220 aaKnown RBP26.41■■□□□ 1.82
CHRD-217ENST00000496527 CNTN2Q02246 1040 aa26.41■■□□□ 1.82
CHRD-217ENST00000496527 PRAMEF19Q5SWL8 479 aa26.41■■□□□ 1.82
CHRD-217ENST00000496527 FAM133AQ8N9E0 248 aa26.41■■□□□ 1.82
CHRD-217ENST00000496527 TRPV1Q8NER1 839 aa26.41■■□□□ 1.82
CHRD-217ENST00000496527 CLEC4DQ8WXI8 215 aa26.41■■□□□ 1.82
CHRD-217ENST00000496527 NRBP1Q9UHY1 535 aa26.41■■□□□ 1.82
CHRD-217ENST00000496527 ABCB11O95342 1321 aa26.4■■□□□ 1.82
CHRD-217ENST00000496527 PTPDC1A2A3K4 754 aa26.4■■□□□ 1.82
CHRD-217ENST00000496527 ZBTB5O15062 677 aa26.4■■□□□ 1.82
CHRD-217ENST00000496527 CPA1P15085 419 aa26.4■■□□□ 1.82
CHRD-217ENST00000496527 GNAQP50148 359 aa26.4■■□□□ 1.82
CHRD-217ENST00000496527 BAATQ14032 418 aaPredicted RBP26.4■■□□□ 1.82
CHRD-217ENST00000496527 MAMDC4Q6UXC1 1216 aa26.4■■□□□ 1.82
CHRD-217ENST00000496527 MTMR8Q96EF0 704 aa26.4■■□□□ 1.82
CHRD-217ENST00000496527 LZTS2Q9BRK4 669 aa26.4■■□□□ 1.82
CHRD-217ENST00000496527 AMNQ9BXJ7 453 aa26.4■■□□□ 1.82
CHRD-217ENST00000496527 CNPY2Q9Y2B0 182 aa26.4■■□□□ 1.82
CHRD-217ENST00000496527 SYNGAP1Q96PV0 1343 aa26.39■■□□□ 1.82
CHRD-217ENST00000496527 SMCHD1A6NHR9 2005 aa26.39■■□□□ 1.82
CHRD-217ENST00000496527 MSCO60682 206 aa26.39■■□□□ 1.82
CHRD-217ENST00000496527 RXRAP19793 462 aa26.39■■□□□ 1.82
CHRD-217ENST00000496527 RNF207Q6ZRF8 634 aa26.39■■□□□ 1.82
CHRD-217ENST00000496527 HOMER1Q86YM7 354 aa26.39■■□□□ 1.82
CHRD-217ENST00000496527 RAB11FIP4Q86YS3 637 aa26.39■■□□□ 1.82
CHRD-217ENST00000496527 FGD4Q96M96 766 aa26.39■■□□□ 1.82
CHRD-217ENST00000496527 DDX20Q9UHI6 824 aaKnown RBP26.39■■□□□ 1.82
CHRD-217ENST00000496527 CASTP20810 708 aaKnown RBP26.38■■□□□ 1.81
CHRD-217ENST00000496527 SLC35G1Q2M3R5 365 aa26.38■■□□□ 1.81
CHRD-217ENST00000496527 MICU3Q86XE3 530 aa26.38■■□□□ 1.81
CHRD-217ENST00000496527 CCDC144CPQ8IYA2 1237 aa26.38■■□□□ 1.81
CHRD-217ENST00000496527 FANCBQ8NB91 859 aa26.38■■□□□ 1.81
CHRD-217ENST00000496527 PIGSQ96S52 555 aa26.38■■□□□ 1.81
CHRD-217ENST00000496527 MRPL11Q9Y3B7 192 aaKnown RBP26.38■■□□□ 1.81
CHRD-217ENST00000496527 SOWAHBA6NEL2 793 aa26.37■■□□□ 1.81
CHRD-217ENST00000496527 SEPT4O43236 478 aa26.37■■□□□ 1.81
CHRD-217ENST00000496527 CYTH3O43739 400 aa26.37■■□□□ 1.81
CHRD-217ENST00000496527 RPS6KB1P23443 525 aa26.37■■□□□ 1.81
CHRD-217ENST00000496527 SMARCA1P28370 1054 aa26.37■■□□□ 1.81
CHRD-217ENST00000496527 TRAF1Q13077 416 aa26.37■■□□□ 1.81
CHRD-217ENST00000496527 LHX8Q68G74 356 aa26.37■■□□□ 1.81
CHRD-217ENST00000496527 APOA5Q6Q788 366 aa26.37■■□□□ 1.81
CHRD-217ENST00000496527 Q6ZUG5 572 aa26.37■■□□□ 1.81
CHRD-217ENST00000496527 RGS22Q8NE09 1264 aa26.37■■□□□ 1.81
CHRD-217ENST00000496527 SPZ1Q9BXG8 430 aa26.37■■□□□ 1.81
CHRD-217ENST00000496527 OGDHLQ9ULD0 1010 aa26.37■■□□□ 1.81
CHRD-217ENST00000496527 ASB14A6NK59 587 aa26.36■■□□□ 1.81
CHRD-217ENST00000496527 FARP2O94887 1054 aaPredicted RBP26.36■■□□□ 1.81
CHRD-217ENST00000496527 SNAI1O95863 264 aaPredicted RBP26.36■■□□□ 1.81
CHRD-217ENST00000496527 CALML3P27482 149 aa26.36■■□□□ 1.81
CHRD-217ENST00000496527 ARMCX2Q7L311 632 aa26.36■■□□□ 1.81
CHRD-217ENST00000496527 MCF2L2Q86YR7 1114 aa26.36■■□□□ 1.81
CHRD-217ENST00000496527 CDKN2AIPQ9NXV6 580 aaPredicted RBP26.36■■□□□ 1.81
CHRD-217ENST00000496527 ADD3Q9UEY8 706 aaKnown RBP26.36■■□□□ 1.81
CHRD-217ENST00000496527 BRPF3Q9ULD4 1205 aa26.36■■□□□ 1.81
CHRD-217ENST00000496527 PNMA6FA0A0J9YX94 578 aa26.35■■□□□ 1.81
CHRD-217ENST00000496527 ZBTB43O43298 467 aa26.35■■□□□ 1.81
CHRD-217ENST00000496527 PLEKHA8P1O95397 391 aa26.35■■□□□ 1.81
CHRD-217ENST00000496527 RPS6P62753 249 aaKnown RBP26.35■■□□□ 1.81
CHRD-217ENST00000496527 SLC30A10Q6XR72 485 aa26.35■■□□□ 1.81
CHRD-217ENST00000496527 ANKLE1Q8NAG6 615 aa26.35■■□□□ 1.81
CHRD-217ENST00000496527 PIBF1Q8WXW3 757 aa26.35■■□□□ 1.81
CHRD-217ENST00000496527 RRP36Q96EU6 259 aaKnown RBP26.35■■□□□ 1.81
CHRD-217ENST00000496527 MAF1Q9H063 256 aa26.35■■□□□ 1.81
CHRD-217ENST00000496527 NAP1L2Q9ULW6 460 aaPredicted RBP26.35■■□□□ 1.81
CHRD-217ENST00000496527 PCDHA1Q9Y5I3 950 aa26.35■■□□□ 1.81
CHRD-217ENST00000496527 KLF18A0A0U1RQI7 1052 aa26.34■■□□□ 1.81
CHRD-217ENST00000496527 PPP1R11O60927 126 aaPredicted RBP26.34■■□□□ 1.81
CHRD-217ENST00000496527 ZNF865P0CJ78 1059 aaPredicted RBP26.34■■□□□ 1.81
CHRD-217ENST00000496527 RUFY3Q7L099 469 aa26.34■■□□□ 1.81
CHRD-217ENST00000496527 PURBQ96QR8 312 aaKnown RBP26.34■■□□□ 1.81
CHRD-217ENST00000496527 ABHD16BQ9H3Z7 469 aa26.34■■□□□ 1.81
CHRD-217ENST00000496527 RBM28Q9NW13 759 aaKnown RBP26.34■■□□□ 1.81
CHRD-217ENST00000496527 ZHX1Q9UKY1 873 aaPredicted RBP26.34■■□□□ 1.81
CHRD-217ENST00000496527 SRBD1Q8N5C6 995 aaKnown RBP26.33■■□□□ 1.81
CHRD-217ENST00000496527 BRF1Q92994 677 aa26.33■■□□□ 1.81
CHRD-217ENST00000496527 TM6SF1Q9BZW5 370 aa26.33■■□□□ 1.81
CHRD-217ENST00000496527 ZSWIM6Q9HCJ5 1215 aa26.33■■□□□ 1.81
CHRD-217ENST00000496527 SEC63Q9UGP8 760 aaKnown RBP26.33■■□□□ 1.81
CHRD-217ENST00000496527 CYP46A1Q9Y6A2 500 aa26.33■■□□□ 1.81
CHRD-217ENST00000496527 MYH6P13533 1939 aa26.33■■□□□ 1.81
CHRD-217ENST00000496527 BAZ2BQ9UIF8 2168 aaKnown RBP26.33■■□□□ 1.81
CHRD-217ENST00000496527 BRCA2P51587 3418 aa26.32■■□□□ 1.8
CHRD-217ENST00000496527 AKR1A1P14550 325 aa26.32■■□□□ 1.8
CHRD-217ENST00000496527 APOBRQ0VD83 1088 aa26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms