RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 NLRC3Q7RTR2 1065 aa6.08□□□□□ -1.44
CLK1-214ENST00000496205 SAPCD2Q86UD0 394 aa6.08□□□□□ -1.44
CLK1-214ENST00000496205 EAF1Q96JC9 268 aaPredicted RBP6.08□□□□□ -1.44
CLK1-214ENST00000496205 MKRN2Q9H000 416 aaKnown RBP6.08□□□□□ -1.44
CLK1-214ENST00000496205 EHMT1Q9H9B1 1298 aa6.08□□□□□ -1.44
CLK1-214ENST00000496205 MRS2Q9HD23 443 aa6.08□□□□□ -1.44
CLK1-214ENST00000496205 KCNQ5Q9NR82 932 aa6.08□□□□□ -1.44
CLK1-214ENST00000496205 USP40Q9NVE5 1235 aa6.08□□□□□ -1.44
CLK1-214ENST00000496205 PCDHB12Q9Y5F1 795 aa6.08□□□□□ -1.44
CLK1-214ENST00000496205 PMF1-BGLAPU3KQ54 211 aa6.08□□□□□ -1.44
CLK1-214ENST00000496205 SCAMP3O14828 347 aaKnown RBP6.07□□□□□ -1.44
CLK1-214ENST00000496205 TNFRSF1AP19438 455 aa6.07□□□□□ -1.44
CLK1-214ENST00000496205 CLCQ05315 142 aa6.07□□□□□ -1.44
CLK1-214ENST00000496205 AUHQ13825 339 aaKnown RBP6.07□□□□□ -1.44
CLK1-214ENST00000496205 ZNF827Q17R98 1081 aa6.07□□□□□ -1.44
CLK1-214ENST00000496205 PAQR3Q6TCH7 311 aa6.07□□□□□ -1.44
CLK1-214ENST00000496205 TMEM87AQ8NBN3 555 aa6.07□□□□□ -1.44
CLK1-214ENST00000496205 DDX1Q92499 740 aaKnown RBP6.07□□□□□ -1.44
CLK1-214ENST00000496205 SLC6A18Q96N87 628 aa6.07□□□□□ -1.44
CLK1-214ENST00000496205 SLC12A9Q9BXP2 914 aa6.07□□□□□ -1.44
CLK1-214ENST00000496205 ROBO2Q9HCK4 1378 aa6.06□□□□□ -1.44
CLK1-214ENST00000496205 SH3D21A4FU49 640 aa6.06□□□□□ -1.44
CLK1-214ENST00000496205 CYBBP04839 570 aa6.06□□□□□ -1.44
CLK1-214ENST00000496205 GSTM1P09488 218 aa6.06□□□□□ -1.44
CLK1-214ENST00000496205 CCNFP41002 786 aa6.06□□□□□ -1.44
CLK1-214ENST00000496205 MC3RP41968 323 aa6.06□□□□□ -1.44
CLK1-214ENST00000496205 ADAM17P78536 824 aa6.06□□□□□ -1.44
CLK1-214ENST00000496205 PRR5P85299 388 aa6.06□□□□□ -1.44
CLK1-214ENST00000496205 ERMP1Q7Z2K6 904 aa6.06□□□□□ -1.44
CLK1-214ENST00000496205 KRTAP9-8Q9BYQ0 159 aa6.06□□□□□ -1.44
CLK1-214ENST00000496205 A0A1W2PQ27 194 aa6.05□□□□□ -1.44
CLK1-214ENST00000496205 A0A1W2PQ64 194 aa6.05□□□□□ -1.44
CLK1-214ENST00000496205 A0A1W2PQC6 194 aa6.05□□□□□ -1.44
CLK1-214ENST00000496205 A0A1W2PQD8 194 aa6.05□□□□□ -1.44
CLK1-214ENST00000496205 SHOXO15266 292 aa6.05□□□□□ -1.44
CLK1-214ENST00000496205 SRGAP3O43295 1099 aa6.05□□□□□ -1.44
CLK1-214ENST00000496205 NOBOXO60393 691 aa6.05□□□□□ -1.44
CLK1-214ENST00000496205 NME1P15531 152 aaKnown RBP6.05□□□□□ -1.44
CLK1-214ENST00000496205 CNR2P34972 360 aa6.05□□□□□ -1.44
CLK1-214ENST00000496205 EIF4A3P38919 411 aaKnown RBP6.05□□□□□ -1.44
CLK1-214ENST00000496205 ZXDAP98168 799 aa6.05□□□□□ -1.44
CLK1-214ENST00000496205 PALD1Q9ULE6 856 aa6.05□□□□□ -1.44
CLK1-214ENST00000496205 F8W031 263 aaPredicted RBP6.04□□□□□ -1.44
CLK1-214ENST00000496205 ITGB3P05106 788 aa6.04□□□□□ -1.44
CLK1-214ENST00000496205 GSNP06396 782 aa6.04□□□□□ -1.44
CLK1-214ENST00000496205 HLA-DQA1Q5Y7H0 255 aa6.04□□□□□ -1.44
CLK1-214ENST00000496205 BICRALQ6AI39 1079 aa6.04□□□□□ -1.44
CLK1-214ENST00000496205 GK5Q6ZS86 529 aa6.04□□□□□ -1.44
CLK1-214ENST00000496205 NT5DC4Q86YG4 428 aa6.04□□□□□ -1.44
CLK1-214ENST00000496205 ZNF296Q8WUU4 475 aaPredicted RBP6.04□□□□□ -1.44
CLK1-214ENST00000496205 RBM15Q96T37 977 aaKnown RBP eCLIP6.04□□□□□ -1.44
CLK1-214ENST00000496205 SLC9A7Q96T83 725 aa6.04□□□□□ -1.44
CLK1-214ENST00000496205 SUPT16HQ9Y5B9 1047 aaKnown RBP6.04□□□□□ -1.44
CLK1-214ENST00000496205 C9IYK1 514 aa6.03□□□□□ -1.44
CLK1-214ENST00000496205 TNFRSF10CO14798 259 aa6.03□□□□□ -1.44
CLK1-214ENST00000496205 MATN3O15232 486 aa6.03□□□□□ -1.44
CLK1-214ENST00000496205 ASGR2P07307 311 aa6.03□□□□□ -1.44
CLK1-214ENST00000496205 TACR1P25103 407 aa6.03□□□□□ -1.44
CLK1-214ENST00000496205 ERCC5P28715 1186 aaPredicted RBP6.03□□□□□ -1.44
CLK1-214ENST00000496205 ZNF76P36508 570 aa6.03□□□□□ -1.44
CLK1-214ENST00000496205 SEZ6Q53EL9 994 aa6.03□□□□□ -1.44
CLK1-214ENST00000496205 JAMLQ86YT9 394 aa6.03□□□□□ -1.44
CLK1-214ENST00000496205 CARFQ8N187 725 aa6.03□□□□□ -1.44
CLK1-214ENST00000496205 NAT16Q8N8M0 369 aa6.03□□□□□ -1.44
CLK1-214ENST00000496205 KRTAP3-1Q9BYR8 98 aa6.03□□□□□ -1.44
CLK1-214ENST00000496205 LNPKQ9C0E8 428 aa6.03□□□□□ -1.44
CLK1-214ENST00000496205 BCAS3Q9H6U6 928 aa6.03□□□□□ -1.44
CLK1-214ENST00000496205 PDLIM7Q9NR12 457 aa6.03□□□□□ -1.44
CLK1-214ENST00000496205 SMPD4Q9NXE4 827 aa6.03□□□□□ -1.44
CLK1-214ENST00000496205 PRR13Q9NZ81 148 aa6.03□□□□□ -1.44
CLK1-214ENST00000496205 H0Y8X5 98 aa6.02□□□□□ -1.45
CLK1-214ENST00000496205 FGF10O15520 208 aaPredicted RBP6.02□□□□□ -1.45
CLK1-214ENST00000496205 ZNF394Q53GI3 561 aa6.02□□□□□ -1.45
CLK1-214ENST00000496205 C7orf61Q8IZ16 206 aa6.02□□□□□ -1.45
CLK1-214ENST00000496205 DSCC1Q9BVC3 393 aa6.02□□□□□ -1.45
CLK1-214ENST00000496205 RNF38Q9H0F5 515 aa6.02□□□□□ -1.45
CLK1-214ENST00000496205 UBP1Q9NZI7 540 aa6.02□□□□□ -1.45
CLK1-214ENST00000496205 FAN1Q9Y2M0 1017 aa6.02□□□□□ -1.45
CLK1-214ENST00000496205 A0A1W2PQJ5 194 aa6.01□□□□□ -1.45
CLK1-214ENST00000496205 FAM86C2PA6NEL3 165 aa6.01□□□□□ -1.45
CLK1-214ENST00000496205 NCAM1P13591 858 aa6.01□□□□□ -1.45
CLK1-214ENST00000496205 RACK1P63244 317 aaKnown RBP6.01□□□□□ -1.45
CLK1-214ENST00000496205 RNF34Q969K3 372 aa6.01□□□□□ -1.45
CLK1-214ENST00000496205 NOX5Q96PH1 765 aa6.01□□□□□ -1.45
CLK1-214ENST00000496205 SRRTQ9BXP5 876 aaKnown RBP6.01□□□□□ -1.45
CLK1-214ENST00000496205 RXFP1Q9HBX9 757 aa6.01□□□□□ -1.45
CLK1-214ENST00000496205 METTL5Q9NRN9 209 aaKnown RBP6.01□□□□□ -1.45
CLK1-214ENST00000496205 SPATA6Q9NWH7 488 aaPredicted RBP6.01□□□□□ -1.45
CLK1-214ENST00000496205 ADAMTS1Q9UHI8 967 aa6.01□□□□□ -1.45
CLK1-214ENST00000496205 PCDHGB7Q9Y5F8 929 aa6.01□□□□□ -1.45
CLK1-214ENST00000496205 MEIS3P2A8K0S8 358 aa6□□□□□ -1.45
CLK1-214ENST00000496205 SUV39H1O43463 412 aa6□□□□□ -1.45
CLK1-214ENST00000496205 ACRP10323 421 aa6□□□□□ -1.45
CLK1-214ENST00000496205 B3GNT8Q7Z7M8 397 aa6□□□□□ -1.45
CLK1-214ENST00000496205 REXO1Q8N1G1 1221 aaKnown RBP6□□□□□ -1.45
CLK1-214ENST00000496205 SLC16A11Q8NCK7 471 aa6□□□□□ -1.45
CLK1-214ENST00000496205 C8orf37Q96NL8 207 aa6□□□□□ -1.45
CLK1-214ENST00000496205 TINF2Q9BSI4 451 aa6□□□□□ -1.45
CLK1-214ENST00000496205 SUCOQ9UBS9 1254 aaKnown RBP6□□□□□ -1.45
CLK1-214ENST00000496205 PMLP29590 882 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms