RNA–Protein interactions for RNA: ENST00000495756.5

ATG3-208, Transcript of autophagy related 3, humanhuman

TSL 1 (best)

Gene ATG3, Length 1,455 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-208ENST00000495756 RIOX2Q8IUF8 465 aa22.44■■□□□ 1.18
ATG3-208ENST00000495756 C8orf76Q96K31 380 aa22.44■■□□□ 1.18
ATG3-208ENST00000495756 MOV10L1Q9BXT6 1211 aaKnown RBP22.44■■□□□ 1.18
ATG3-208ENST00000495756 CWC22Q9HCG8 908 aaKnown RBP22.44■■□□□ 1.18
ATG3-208ENST00000495756 GJB4Q9NTQ9 266 aa22.44■■□□□ 1.18
ATG3-208ENST00000495756 RNF186Q9NXI6 227 aa22.44■■□□□ 1.18
ATG3-208ENST00000495756 XBP1P17861 261 aa22.43■■□□□ 1.18
ATG3-208ENST00000495756 FOSBP53539 338 aa22.43■■□□□ 1.18
ATG3-208ENST00000495756 C17orf99Q6UX52 265 aa22.43■■□□□ 1.18
ATG3-208ENST00000495756 FAM177A1Q8N128 213 aaPredicted RBP22.43■■□□□ 1.18
ATG3-208ENST00000495756 CCDC12Q8WUD4 166 aaPredicted RBP22.43■■□□□ 1.18
ATG3-208ENST00000495756 CFHR5Q9BXR6 569 aa22.43■■□□□ 1.18
ATG3-208ENST00000495756 HOMER2Q9NSB8 354 aa22.43■■□□□ 1.18
ATG3-208ENST00000495756 MRPL11Q9Y3B7 192 aaKnown RBP22.43■■□□□ 1.18
ATG3-208ENST00000495756 TRPA1O75762 1119 aa22.42■■□□□ 1.18
ATG3-208ENST00000495756 PDCP20941 246 aa22.42■■□□□ 1.18
ATG3-208ENST00000495756 TKFCQ3LXA3 575 aa22.42■■□□□ 1.18
ATG3-208ENST00000495756 LARP1BQ659C4 914 aaKnown RBP22.42■■□□□ 1.18
ATG3-208ENST00000495756 CCDC148Q8NFR7 591 aa22.42■■□□□ 1.18
ATG3-208ENST00000495756 TRERF1Q96PN7 1200 aa22.42■■□□□ 1.18
ATG3-208ENST00000495756 R3HDMLQ9H3Y0 253 aa22.42■■□□□ 1.18
ATG3-208ENST00000495756 RNF146Q9NTX7 359 aa22.42■■□□□ 1.18
ATG3-208ENST00000495756 SLC25A27O95847 323 aa22.41■■□□□ 1.18
ATG3-208ENST00000495756 CCNA1P78396 465 aa22.41■■□□□ 1.18
ATG3-208ENST00000495756 TRIM29Q14134 588 aa22.41■■□□□ 1.18
ATG3-208ENST00000495756 FBXO18Q8NFZ0 1043 aa22.41■■□□□ 1.18
ATG3-208ENST00000495756 CLEC4DQ8WXI8 215 aa22.41■■□□□ 1.18
ATG3-208ENST00000495756 SMCO2A6NFE2 343 aa22.41■■□□□ 1.18
ATG3-208ENST00000495756 OPLAHO14841 1288 aa22.41■■□□□ 1.18
ATG3-208ENST00000495756 TBC1D8O95759 1140 aa22.41■■□□□ 1.18
ATG3-208ENST00000495756 COPB2P35606 906 aa22.41■■□□□ 1.18
ATG3-208ENST00000495756 MAP2K1Q02750 393 aaPredicted RBP22.41■■□□□ 1.18
ATG3-208ENST00000495756 MUM1L1Q5H9M0 696 aa22.41■■□□□ 1.18
ATG3-208ENST00000495756 KRT40Q6A162 431 aa22.41■■□□□ 1.18
ATG3-208ENST00000495756 SHCBP1Q8NEM2 672 aa22.41■■□□□ 1.18
ATG3-208ENST00000495756 PHF20Q9BVI0 1012 aa22.41■■□□□ 1.18
ATG3-208ENST00000495756 ZMYND12Q9H0C1 365 aa22.41■■□□□ 1.18
ATG3-208ENST00000495756 KCNJ14Q9UNX9 436 aa22.41■■□□□ 1.18
ATG3-208ENST00000495756 ESYT2A0FGR8 921 aa22.4■■□□□ 1.18
ATG3-208ENST00000495756 ERCC3P19447 782 aa22.4■■□□□ 1.18
ATG3-208ENST00000495756 SYT1P21579 422 aa22.4■■□□□ 1.18
ATG3-208ENST00000495756 NLRP5P59047 1200 aa22.4■■□□□ 1.18
ATG3-208ENST00000495756 GUCY1B3Q02153 619 aa22.4■■□□□ 1.18
ATG3-208ENST00000495756 NCAPG2Q86XI2 1143 aa22.4■■□□□ 1.18
ATG3-208ENST00000495756 CHST13Q8NET6 341 aa22.4■■□□□ 1.18
ATG3-208ENST00000495756 PORCNQ9H237 461 aa22.4■■□□□ 1.18
ATG3-208ENST00000495756 MROH8Q9H579 483 aa22.4■■□□□ 1.18
ATG3-208ENST00000495756 PSTPIP2Q9H939 334 aa22.4■■□□□ 1.18
ATG3-208ENST00000495756 NFIBO00712 420 aa22.39■■□□□ 1.17
ATG3-208ENST00000495756 RGS22Q8NE09 1264 aa22.39■■□□□ 1.17
ATG3-208ENST00000495756 ACAD9Q9H845 621 aa22.39■■□□□ 1.17
ATG3-208ENST00000495756 C6orf50Q9HD87 102 aa22.39■■□□□ 1.17
ATG3-208ENST00000495756 SAGE1Q9NXZ1 904 aa22.39■■□□□ 1.17
ATG3-208ENST00000495756 FBXO40Q9UH90 709 aa22.39■■□□□ 1.17
ATG3-208ENST00000495756 H3BQV1 296 aa22.38■■□□□ 1.17
ATG3-208ENST00000495756 CALML3P27482 149 aa22.38■■□□□ 1.17
ATG3-208ENST00000495756 GNA11P29992 359 aa22.38■■□□□ 1.17
ATG3-208ENST00000495756 ADCY7P51828 1080 aa22.38■■□□□ 1.17
ATG3-208ENST00000495756 IFFO2Q5TF58 517 aa22.38■■□□□ 1.17
ATG3-208ENST00000495756 GALNT17Q6IS24 598 aa22.38■■□□□ 1.17
ATG3-208ENST00000495756 CUL5Q93034 780 aa22.38■■□□□ 1.17
ATG3-208ENST00000495756 EFCC1Q9HA90 598 aa22.38■■□□□ 1.17
ATG3-208ENST00000495756 RIC8AQ9NPQ8 531 aa22.38■■□□□ 1.17
ATG3-208ENST00000495756 MMP1P03956 469 aa22.37■■□□□ 1.17
ATG3-208ENST00000495756 MRPL12P52815 198 aaKnown RBP22.37■■□□□ 1.17
ATG3-208ENST00000495756 NPY5RQ15761 445 aa22.37■■□□□ 1.17
ATG3-208ENST00000495756 MCF2L2Q86YR7 1114 aa22.37■■□□□ 1.17
ATG3-208ENST00000495756 GLT8D2Q9H1C3 349 aa22.37■■□□□ 1.17
ATG3-208ENST00000495756 PCDHA4Q9UN74 947 aa22.37■■□□□ 1.17
ATG3-208ENST00000495756 WDR78Q5VTH9 848 aa22.36■■□□□ 1.17
ATG3-208ENST00000495756 TEX2Q8IWB9 1127 aa22.36■■□□□ 1.17
ATG3-208ENST00000495756 CCAR1Q8IX12 1150 aaKnown RBP22.36■■□□□ 1.17
ATG3-208ENST00000495756 DAGLBQ8NCG7 672 aa22.36■■□□□ 1.17
ATG3-208ENST00000495756 TBC1D5Q92609 795 aa22.36■■□□□ 1.17
ATG3-208ENST00000495756 RBBP6Q7Z6E9 1792 aaKnown RBP22.36■■□□□ 1.17
ATG3-208ENST00000495756 VPS37CA5D8V6 355 aaPredicted RBP22.35■■□□□ 1.17
ATG3-208ENST00000495756 ADAMTS3O15072 1205 aa22.35■■□□□ 1.17
ATG3-208ENST00000495756 STX6O43752 255 aa22.35■■□□□ 1.17
ATG3-208ENST00000495756 CFBP00751 764 aa22.35■■□□□ 1.17
ATG3-208ENST00000495756 PDIA4P13667 645 aaKnown RBP22.35■■□□□ 1.17
ATG3-208ENST00000495756 MAPK4P31152 587 aa22.35■■□□□ 1.17
ATG3-208ENST00000495756 DDIT3P35638 169 aa22.35■■□□□ 1.17
ATG3-208ENST00000495756 GHRHRQ02643 423 aa22.35■■□□□ 1.17
ATG3-208ENST00000495756 SAFBQ15424 915 aaKnown RBP eCLIP22.35■■□□□ 1.17
ATG3-208ENST00000495756 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.35■■□□□ 1.17
ATG3-208ENST00000495756 BLIDQ8IZY5 108 aa22.35■■□□□ 1.17
ATG3-208ENST00000495756 BICD2Q8TD16 824 aa22.35■■□□□ 1.17
ATG3-208ENST00000495756 BEGAINQ9BUH8 593 aa22.35■■□□□ 1.17
ATG3-208ENST00000495756 MAF1Q9H063 256 aa22.35■■□□□ 1.17
ATG3-208ENST00000495756 GCOM1H8Y6P7 765 aaPredicted RBP22.34■■□□□ 1.17
ATG3-208ENST00000495756 PIK3CDO00329 1044 aa22.34■■□□□ 1.17
ATG3-208ENST00000495756 MEIS2O14770 477 aa22.34■■□□□ 1.17
ATG3-208ENST00000495756 POLR2MP0CAP2 368 aa22.34■■□□□ 1.17
ATG3-208ENST00000495756 HSD17B4P51659 736 aa22.34■■□□□ 1.17
ATG3-208ENST00000495756 USP17L6PQ6QN14 398 aa22.34■■□□□ 1.17
ATG3-208ENST00000495756 NSMFQ6X4W1 530 aa22.34■■□□□ 1.17
ATG3-208ENST00000495756 RNF207Q6ZRF8 634 aa22.34■■□□□ 1.17
ATG3-208ENST00000495756 A1CFQ9NQ94 594 aaKnown RBP22.34■■□□□ 1.17
ATG3-208ENST00000495756 WBP1LQ9NX94 342 aa22.34■■□□□ 1.17
ATG3-208ENST00000495756 MTMR6Q9Y217 621 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms