RNA–Protein interactions for RNA: ENST00000495693.1

EPHA4-213, Transcript of EPH receptor A4, humanhuman

TSL 3

Gene EPHA4, Length 588 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-213ENST00000495693 USP17L21D6R901 530 aa9.88□□□□□ -0.83
EPHA4-213ENST00000495693 MYO1BO43795 1136 aa9.88□□□□□ -0.83
EPHA4-213ENST00000495693 VSIG8P0DPA2 414 aa9.88□□□□□ -0.83
EPHA4-213ENST00000495693 NPR1P16066 1061 aa9.88□□□□□ -0.83
EPHA4-213ENST00000495693 CALML3P27482 149 aa9.88□□□□□ -0.83
EPHA4-213ENST00000495693 SCNN1DP51172 638 aa9.88□□□□□ -0.83
EPHA4-213ENST00000495693 GUCY1B3Q02153 619 aa9.88□□□□□ -0.83
EPHA4-213ENST00000495693 TXNRD1Q16881 649 aa9.88□□□□□ -0.83
EPHA4-213ENST00000495693 KANK3Q6NY19 840 aa9.88□□□□□ -0.83
EPHA4-213ENST00000495693 USP17L2Q6R6M4 530 aa9.88□□□□□ -0.83
EPHA4-213ENST00000495693 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.88□□□□□ -0.83
EPHA4-213ENST00000495693 USP17L1Q7RTZ2 530 aa9.88□□□□□ -0.83
EPHA4-213ENST00000495693 NOSTRINQ8IVI9 506 aa9.88□□□□□ -0.83
EPHA4-213ENST00000495693 CRACR2BQ8N4Y2 399 aaPredicted RBP9.88□□□□□ -0.83
EPHA4-213ENST00000495693 NUP133Q8WUM0 1156 aa9.88□□□□□ -0.83
EPHA4-213ENST00000495693 SDF4Q9BRK5 362 aa9.88□□□□□ -0.83
EPHA4-213ENST00000495693 KAT14Q9H8E8 782 aa9.88□□□□□ -0.83
EPHA4-213ENST00000495693 ETNK1Q9HBU6 452 aa9.88□□□□□ -0.83
EPHA4-213ENST00000495693 CD209Q9NNX6 404 aa9.88□□□□□ -0.83
EPHA4-213ENST00000495693 RAB6BQ9NRW1 208 aa9.88□□□□□ -0.83
EPHA4-213ENST00000495693 LRRC4BQ9NT99 713 aa9.88□□□□□ -0.83
EPHA4-213ENST00000495693 FAM13BQ9NYF5 915 aa9.88□□□□□ -0.83
EPHA4-213ENST00000495693 TFCP2L1Q9NZI6 479 aa9.88□□□□□ -0.83
EPHA4-213ENST00000495693 PCDHA7Q9UN72 937 aa9.88□□□□□ -0.83
EPHA4-213ENST00000495693 ZKSCAN5Q9Y2L8 839 aa9.88□□□□□ -0.83
EPHA4-213ENST00000495693 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.88□□□□□ -0.83
EPHA4-213ENST00000495693 FAM205AQ6ZU69 1335 aa9.87□□□□□ -0.83
EPHA4-213ENST00000495693 BECN2A8MW95 431 aa9.87□□□□□ -0.83
EPHA4-213ENST00000495693 POLRMTO00411 1230 aaKnown RBP9.87□□□□□ -0.83
EPHA4-213ENST00000495693 PPFIA3O75145 1194 aa9.87□□□□□ -0.83
EPHA4-213ENST00000495693 PRDX5P30044 214 aa9.87□□□□□ -0.83
EPHA4-213ENST00000495693 CDC27P30260 824 aa9.87□□□□□ -0.83
EPHA4-213ENST00000495693 KRT2P35908 639 aa9.87□□□□□ -0.83
EPHA4-213ENST00000495693 TRAPPC10P48553 1259 aa9.87□□□□□ -0.83
EPHA4-213ENST00000495693 ZNF165P49910 485 aa9.87□□□□□ -0.83
EPHA4-213ENST00000495693 CENPCQ03188 943 aa9.87□□□□□ -0.83
EPHA4-213ENST00000495693 CEBPZQ03701 1054 aaKnown RBP9.87□□□□□ -0.83
EPHA4-213ENST00000495693 GALNT17Q6IS24 598 aa9.87□□□□□ -0.83
EPHA4-213ENST00000495693 PTF1AQ7RTS3 328 aa9.87□□□□□ -0.83
EPHA4-213ENST00000495693 ADGRA1Q86SQ6 560 aa9.87□□□□□ -0.83
EPHA4-213ENST00000495693 TRIM50Q86XT4 487 aa9.87□□□□□ -0.83
EPHA4-213ENST00000495693 ZNF444Q8N0Y2 327 aaPredicted RBP9.87□□□□□ -0.83
EPHA4-213ENST00000495693 ENAHQ8N8S7 591 aaPredicted RBP9.87□□□□□ -0.83
EPHA4-213ENST00000495693 CCDC148Q8NFR7 591 aa9.87□□□□□ -0.83
EPHA4-213ENST00000495693 ANKS1AQ92625 1134 aa9.87□□□□□ -0.83
EPHA4-213ENST00000495693 BPIFA3Q9BQP9 254 aa9.87□□□□□ -0.83
EPHA4-213ENST00000495693 FHDC1Q9C0D6 1143 aaPredicted RBP9.87□□□□□ -0.83
EPHA4-213ENST00000495693 MKNK2Q9HBH9 465 aa9.87□□□□□ -0.83
EPHA4-213ENST00000495693 SH3GLB2Q9NR46 395 aa9.87□□□□□ -0.83
EPHA4-213ENST00000495693 MCM9Q9NXL9 1143 aa9.87□□□□□ -0.83
EPHA4-213ENST00000495693 MRVI1Q9Y6F6 885 aa9.87□□□□□ -0.83
EPHA4-213ENST00000495693 NRXN2Q9P2S2 1712 aa9.87□□□□□ -0.83
EPHA4-213ENST00000495693 FAM237AA0A1B0GTK4 181 aa9.86□□□□□ -0.83
EPHA4-213ENST00000495693 SMTNL1A8MU46 457 aa9.86□□□□□ -0.83
EPHA4-213ENST00000495693 hCG_1984214I3L0E3 225 aa9.86□□□□□ -0.83
EPHA4-213ENST00000495693 NRDCO43847 1150 aa9.86□□□□□ -0.83
EPHA4-213ENST00000495693 ZNF500O60304 480 aaPredicted RBP9.86□□□□□ -0.83
EPHA4-213ENST00000495693 TRIM37O94972 964 aa9.86□□□□□ -0.83
EPHA4-213ENST00000495693 INHAP05111 366 aa9.86□□□□□ -0.83
EPHA4-213ENST00000495693 POLR3DP05423 398 aaPredicted RBP9.86□□□□□ -0.83
EPHA4-213ENST00000495693 ANO6Q4KMQ2 910 aa9.86□□□□□ -0.83
EPHA4-213ENST00000495693 C12orf60Q5U649 245 aa9.86□□□□□ -0.83
EPHA4-213ENST00000495693 DIS3L2Q8IYB7 885 aaKnown RBP9.86□□□□□ -0.83
EPHA4-213ENST00000495693 FMR1NBQ8N0W7 255 aaPredicted RBP9.86□□□□□ -0.83
EPHA4-213ENST00000495693 ZNF713Q8N859 430 aaPredicted RBP9.86□□□□□ -0.83
EPHA4-213ENST00000495693 ENGASEQ8NFI3 743 aa9.86□□□□□ -0.83
EPHA4-213ENST00000495693 CCDC12Q8WUD4 166 aaPredicted RBP9.86□□□□□ -0.83
EPHA4-213ENST00000495693 PHKBQ93100 1093 aa9.86□□□□□ -0.83
EPHA4-213ENST00000495693 ATP6V0A2Q9Y487 856 aa9.86□□□□□ -0.83
EPHA4-213ENST00000495693 PARP3Q9Y6F1 533 aa9.86□□□□□ -0.83
EPHA4-213ENST00000495693 COL4A1P02462 1669 aa9.86□□□□□ -0.83
EPHA4-213ENST00000495693 MYO3BQ8WXR4 1341 aa9.85□□□□□ -0.83
EPHA4-213ENST00000495693 C10orf71Q711Q0 1435 aa9.85□□□□□ -0.83
EPHA4-213ENST00000495693 GPR75-ASB3A0A0A6YYF3 556 aa9.85□□□□□ -0.83
EPHA4-213ENST00000495693 NEMFO60524 1076 aa9.85□□□□□ -0.83
EPHA4-213ENST00000495693 ADCY5O95622 1261 aa9.85□□□□□ -0.83
EPHA4-213ENST00000495693 TSPY3P0CV98 308 aa9.85□□□□□ -0.83
EPHA4-213ENST00000495693 TSPY8P0CW00 308 aa9.85□□□□□ -0.83
EPHA4-213ENST00000495693 SMARCA1P28370 1054 aa9.85□□□□□ -0.83
EPHA4-213ENST00000495693 CDC25BP30305 580 aa9.85□□□□□ -0.83
EPHA4-213ENST00000495693 SYKP43405 635 aa9.85□□□□□ -0.83
EPHA4-213ENST00000495693 GDF10P55107 478 aa9.85□□□□□ -0.83
EPHA4-213ENST00000495693 FKBP1AP62942 108 aaKnown RBP9.85□□□□□ -0.83
EPHA4-213ENST00000495693 DYNLL1P63167 89 aaKnown RBP9.85□□□□□ -0.83
EPHA4-213ENST00000495693 GTF2IP78347 998 aa9.85□□□□□ -0.83
EPHA4-213ENST00000495693 GPSM2P81274 684 aa9.85□□□□□ -0.83
EPHA4-213ENST00000495693 TROAPQ12815 778 aa9.85□□□□□ -0.83
EPHA4-213ENST00000495693 SNW1Q13573 536 aaKnown RBP9.85□□□□□ -0.83
EPHA4-213ENST00000495693 CAMK4Q16566 473 aa9.85□□□□□ -0.83
EPHA4-213ENST00000495693 CT47A1Q5JQC4 288 aaPredicted RBP9.85□□□□□ -0.83
EPHA4-213ENST00000495693 FAM182BQ5T319 152 aa9.85□□□□□ -0.83
EPHA4-213ENST00000495693 SARM1Q6SZW1 724 aa9.85□□□□□ -0.83
EPHA4-213ENST00000495693 TMTC3Q6ZXV5 915 aa9.85□□□□□ -0.83
EPHA4-213ENST00000495693 NBPF11Q86T75 865 aa9.85□□□□□ -0.83
EPHA4-213ENST00000495693 CCDC155Q8N6L0 562 aa9.85□□□□□ -0.83
EPHA4-213ENST00000495693 TBC1D16Q8TBP0 767 aa9.85□□□□□ -0.83
EPHA4-213ENST00000495693 IRF7Q92985 503 aa9.85□□□□□ -0.83
EPHA4-213ENST00000495693 FERMT2Q96AC1 680 aa9.85□□□□□ -0.83
EPHA4-213ENST00000495693 MASTLQ96GX5 879 aa9.85□□□□□ -0.83
EPHA4-213ENST00000495693 PPP1R12CQ9BZL4 782 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms