RNA–Protein interactions for RNA: ENST00000495666.5

RFTN1-211, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 4

Gene RFTN1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-211ENST00000495666 ASGR1P07306 291 aa12.6□□□□□ -0.39
RFTN1-211ENST00000495666 ITGB8P26012 769 aa12.6□□□□□ -0.39
RFTN1-211ENST00000495666 OAZ1P54368 228 aa12.6□□□□□ -0.39
RFTN1-211ENST00000495666 MFAP1P55081 439 aaKnown RBP12.6□□□□□ -0.39
RFTN1-211ENST00000495666 TNFAIP2Q03169 654 aa12.6□□□□□ -0.39
RFTN1-211ENST00000495666 GNASQ5JWF2 1037 aa12.6□□□□□ -0.39
RFTN1-211ENST00000495666 PPP4R3BQ5MIZ7 849 aa12.6□□□□□ -0.39
RFTN1-211ENST00000495666 AKNAD1Q5T1N1 836 aa12.6□□□□□ -0.39
RFTN1-211ENST00000495666 SLC30A10Q6XR72 485 aa12.6□□□□□ -0.39
RFTN1-211ENST00000495666 SLC17A8Q8NDX2 589 aa12.6□□□□□ -0.39
RFTN1-211ENST00000495666 UBA5Q9GZZ9 404 aa12.6□□□□□ -0.39
RFTN1-211ENST00000495666 ABHD16BQ9H3Z7 469 aa12.6□□□□□ -0.39
RFTN1-211ENST00000495666 PDGFCQ9NRA1 345 aa12.6□□□□□ -0.39
RFTN1-211ENST00000495666 NRBP1Q9UHY1 535 aa12.6□□□□□ -0.39
RFTN1-211ENST00000495666 LAMA2P24043 3122 aaKnown RBP12.6□□□□□ -0.39
RFTN1-211ENST00000495666 PDHBP11177 359 aa12.59□□□□□ -0.39
RFTN1-211ENST00000495666 CACNB1Q02641 598 aaPredicted RBP12.59□□□□□ -0.39
RFTN1-211ENST00000495666 BAATQ14032 418 aaPredicted RBP12.59□□□□□ -0.39
RFTN1-211ENST00000495666 ALX1Q15699 326 aa12.59□□□□□ -0.39
RFTN1-211ENST00000495666 LRIT3Q3SXY7 679 aa12.59□□□□□ -0.39
RFTN1-211ENST00000495666 MAMDC4Q6UXC1 1216 aa12.59□□□□□ -0.39
RFTN1-211ENST00000495666 TLK2Q86UE8 772 aa12.59□□□□□ -0.39
RFTN1-211ENST00000495666 FAM133AQ8N9E0 248 aa12.59□□□□□ -0.39
RFTN1-211ENST00000495666 NUP133Q8WUM0 1156 aa12.59□□□□□ -0.39
RFTN1-211ENST00000495666 ESR2Q92731 530 aa12.59□□□□□ -0.39
RFTN1-211ENST00000495666 RNPC3Q96LT9 517 aaKnown RBP12.59□□□□□ -0.39
RFTN1-211ENST00000495666 GLT1D1Q96MS3 346 aa12.59□□□□□ -0.39
RFTN1-211ENST00000495666 CYP39A1Q9NYL5 469 aa12.59□□□□□ -0.39
RFTN1-211ENST00000495666 SYNPO2Q9UMS6 1093 aa12.59□□□□□ -0.39
RFTN1-211ENST00000495666 ASTN1O14525 1302 aa12.59□□□□□ -0.39
RFTN1-211ENST00000495666 COL6A3P12111 3177 aa12.58□□□□□ -0.4
RFTN1-211ENST00000495666 DCDC2CA8MYV0 355 aa12.58□□□□□ -0.4
RFTN1-211ENST00000495666 DYNC1LI2O43237 492 aaPredicted RBP12.58□□□□□ -0.4
RFTN1-211ENST00000495666 DUSP11O75319 330 aaKnown RBP12.58□□□□□ -0.4
RFTN1-211ENST00000495666 ICAM1P05362 532 aa12.58□□□□□ -0.4
RFTN1-211ENST00000495666 EPHB4P54760 987 aa12.58□□□□□ -0.4
RFTN1-211ENST00000495666 PSMC6P62333 389 aa12.58□□□□□ -0.4
RFTN1-211ENST00000495666 SNX17Q15036 470 aa12.58□□□□□ -0.4
RFTN1-211ENST00000495666 CXCL17Q6UXB2 119 aa12.58□□□□□ -0.4
RFTN1-211ENST00000495666 KIAA1211Q6ZU35 1233 aa12.58□□□□□ -0.4
RFTN1-211ENST00000495666 AP5M1Q9H0R1 490 aa12.58□□□□□ -0.4
RFTN1-211ENST00000495666 RANBP17Q9H2T7 1088 aaKnown RBP12.58□□□□□ -0.4
RFTN1-211ENST00000495666 RNF41Q9H4P4 317 aaPredicted RBP12.58□□□□□ -0.4
RFTN1-211ENST00000495666 VAT1LQ9HCJ6 419 aa12.58□□□□□ -0.4
RFTN1-211ENST00000495666 ASB14A6NK59 587 aa12.57□□□□□ -0.4
RFTN1-211ENST00000495666 FDX1P10109 184 aa12.57□□□□□ -0.4
RFTN1-211ENST00000495666 PDE4AP27815 886 aa12.57□□□□□ -0.4
RFTN1-211ENST00000495666 FPGSQ05932 587 aa12.57□□□□□ -0.4
RFTN1-211ENST00000495666 ZNF543Q08ER8 600 aa12.57□□□□□ -0.4
RFTN1-211ENST00000495666 FAAP100Q0VG06 881 aa12.57□□□□□ -0.4
RFTN1-211ENST00000495666 TKFCQ3LXA3 575 aa12.57□□□□□ -0.4
RFTN1-211ENST00000495666 ZNF467Q7Z7K2 595 aaPredicted RBP12.57□□□□□ -0.4
RFTN1-211ENST00000495666 MSL3Q8N5Y2 521 aaKnown RBP12.57□□□□□ -0.4
RFTN1-211ENST00000495666 IL25Q9H293 177 aa12.57□□□□□ -0.4
RFTN1-211ENST00000495666 KAT14Q9H8E8 782 aa12.57□□□□□ -0.4
RFTN1-211ENST00000495666 A0A0U1RQG5 324 aaPredicted RBP12.56□□□□□ -0.4
RFTN1-211ENST00000495666 MOXD2PA6NHM9 499 aa12.56□□□□□ -0.4
RFTN1-211ENST00000495666 MYL3P08590 195 aa12.56□□□□□ -0.4
RFTN1-211ENST00000495666 ACRP10323 421 aa12.56□□□□□ -0.4
RFTN1-211ENST00000495666 SMPD1P17405 629 aa12.56□□□□□ -0.4
RFTN1-211ENST00000495666 ALDH5A1P51649 535 aaPredicted RBP12.56□□□□□ -0.4
RFTN1-211ENST00000495666 IMMTQ16891 758 aaKnown RBP12.56□□□□□ -0.4
RFTN1-211ENST00000495666 ZNF697Q5TEC3 545 aa12.56□□□□□ -0.4
RFTN1-211ENST00000495666 IQCA1Q86XH1 822 aa12.56□□□□□ -0.4
RFTN1-211ENST00000495666 PCSK9Q8NBP7 692 aaKnown RBP12.56□□□□□ -0.4
RFTN1-211ENST00000495666 PNMA1Q8ND90 353 aa12.56□□□□□ -0.4
RFTN1-211ENST00000495666 KLHDC9Q8NEP7 349 aa12.56□□□□□ -0.4
RFTN1-211ENST00000495666 KATNBL1Q9H079 304 aa12.56□□□□□ -0.4
RFTN1-211ENST00000495666 MTMR10Q9NXD2 777 aa12.56□□□□□ -0.4
RFTN1-211ENST00000495666 TNKSO95271 1327 aa12.56□□□□□ -0.4
RFTN1-211ENST00000495666 ZMYM6O95789 1325 aa12.56□□□□□ -0.4
RFTN1-211ENST00000495666 SORBS3O60504 671 aa12.55□□□□□ -0.4
RFTN1-211ENST00000495666 GSPT1P15170 499 aaKnown RBP12.55□□□□□ -0.4
RFTN1-211ENST00000495666 GJA9P57773 515 aa12.55□□□□□ -0.4
RFTN1-211ENST00000495666 PDE4DQ08499 809 aa12.55□□□□□ -0.4
RFTN1-211ENST00000495666 CDC37Q16543 378 aaPredicted RBP12.55□□□□□ -0.4
RFTN1-211ENST00000495666 FSCN1Q16658 493 aaKnown RBP12.55□□□□□ -0.4
RFTN1-211ENST00000495666 FAM47CQ5HY64 1035 aa12.55□□□□□ -0.4
RFTN1-211ENST00000495666 RNF207Q6ZRF8 634 aa12.55□□□□□ -0.4
RFTN1-211ENST00000495666 PIBF1Q8WXW3 757 aa12.55□□□□□ -0.4
RFTN1-211ENST00000495666 ZSCAN10Q96SZ4 725 aaPredicted RBP12.55□□□□□ -0.4
RFTN1-211ENST00000495666 UBAC1Q9BSL1 405 aa12.55□□□□□ -0.4
RFTN1-211ENST00000495666 TSEN34Q9BSV6 310 aaKnown RBP12.55□□□□□ -0.4
RFTN1-211ENST00000495666 RBAK-RBAKDNI3L0D1 243 aa12.54□□□□□ -0.4
RFTN1-211ENST00000495666 HIP1O00291 1037 aa12.54□□□□□ -0.4
RFTN1-211ENST00000495666 TLR3O15455 904 aaKnown RBP12.54□□□□□ -0.4
RFTN1-211ENST00000495666 PLA2G6O60733 806 aa12.54□□□□□ -0.4
RFTN1-211ENST00000495666 FGRP09769 529 aa12.54□□□□□ -0.4
RFTN1-211ENST00000495666 CSF2RAP15509 400 aa12.54□□□□□ -0.4
RFTN1-211ENST00000495666 CYP2C18P33260 490 aa12.54□□□□□ -0.4
RFTN1-211ENST00000495666 CCL23P55773 120 aa12.54□□□□□ -0.4
RFTN1-211ENST00000495666 RPS6P62753 249 aaKnown RBP12.54□□□□□ -0.4
RFTN1-211ENST00000495666 AAMPQ13685 434 aa12.54□□□□□ -0.4
RFTN1-211ENST00000495666 TTC22Q5TAA0 569 aa12.54□□□□□ -0.4
RFTN1-211ENST00000495666 CCSAPQ6IQ19 270 aaPredicted RBP12.54□□□□□ -0.4
RFTN1-211ENST00000495666 CHST3Q7LGC8 479 aa12.54□□□□□ -0.4
RFTN1-211ENST00000495666 OR6J1Q8NGC5 347 aa12.54□□□□□ -0.4
RFTN1-211ENST00000495666 COPS5Q92905 334 aa12.54□□□□□ -0.4
RFTN1-211ENST00000495666 TRPV6Q9H1D0 765 aa12.54□□□□□ -0.4
RFTN1-211ENST00000495666 UPF3AQ9H1J1 476 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms