RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 PNMA6FA0A0J9YX94 578 aa11.69□□□□□ -0.54
HDAC3-214ENST00000495485 FAM196BA6NMK8 535 aa11.69□□□□□ -0.54
HDAC3-214ENST00000495485 LAD1O00515 517 aa11.69□□□□□ -0.54
HDAC3-214ENST00000495485 EEF2P13639 858 aaKnown RBP11.69□□□□□ -0.54
HDAC3-214ENST00000495485 SLC1A4P43007 532 aa11.69□□□□□ -0.54
HDAC3-214ENST00000495485 CCDC173Q0VFZ6 552 aa11.69□□□□□ -0.54
HDAC3-214ENST00000495485 NR5A1Q13285 461 aa11.69□□□□□ -0.54
HDAC3-214ENST00000495485 ORC2Q13416 577 aaPredicted RBP11.69□□□□□ -0.54
HDAC3-214ENST00000495485 PTPAQ15257 358 aa11.69□□□□□ -0.54
HDAC3-214ENST00000495485 CCL15Q16663 113 aa11.69□□□□□ -0.54
HDAC3-214ENST00000495485 TTC38Q5R3I4 469 aa11.69□□□□□ -0.54
HDAC3-214ENST00000495485 RBM43Q6ZSC3 357 aaKnown RBP11.69□□□□□ -0.54
HDAC3-214ENST00000495485 TEX2Q8IWB9 1127 aa11.69□□□□□ -0.54
HDAC3-214ENST00000495485 ELOA2Q8IYF1 753 aaPredicted RBP11.69□□□□□ -0.54
HDAC3-214ENST00000495485 GMCL1P1Q8NEA9 526 aa11.69□□□□□ -0.54
HDAC3-214ENST00000495485 C12orf42Q96LP6 360 aa11.69□□□□□ -0.54
HDAC3-214ENST00000495485 NAP1L4Q99733 375 aaKnown RBP11.69□□□□□ -0.54
HDAC3-214ENST00000495485 NAT10Q9H0A0 1025 aaKnown RBP11.69□□□□□ -0.54
HDAC3-214ENST00000495485 KIAA1683Q9H0B3 1180 aa11.69□□□□□ -0.54
HDAC3-214ENST00000495485 ZMYND12Q9H0C1 365 aa11.69□□□□□ -0.54
HDAC3-214ENST00000495485 TMOD4Q9NZQ9 345 aa11.69□□□□□ -0.54
HDAC3-214ENST00000495485 SRPRBQ9Y5M8 271 aaKnown RBP11.69□□□□□ -0.54
HDAC3-214ENST00000495485 hCG_1642624A0A1W2PR95 340 aa11.68□□□□□ -0.54
HDAC3-214ENST00000495485 SMCO2A6NFE2 343 aa11.68□□□□□ -0.54
HDAC3-214ENST00000495485 STXBP3O00186 592 aa11.68□□□□□ -0.54
HDAC3-214ENST00000495485 ZNF202O95125 648 aa11.68□□□□□ -0.54
HDAC3-214ENST00000495485 GDF11O95390 407 aa11.68□□□□□ -0.54
HDAC3-214ENST00000495485 GOLGA8HP0CJ92 632 aa11.68□□□□□ -0.54
HDAC3-214ENST00000495485 PTPREP23469 700 aa11.68□□□□□ -0.54
HDAC3-214ENST00000495485 MARCKSP29966 332 aaPredicted RBP11.68□□□□□ -0.54
HDAC3-214ENST00000495485 GJA5P36382 358 aa11.68□□□□□ -0.54
HDAC3-214ENST00000495485 SYKP43405 635 aa11.68□□□□□ -0.54
HDAC3-214ENST00000495485 SPP2Q13103 211 aa11.68□□□□□ -0.54
HDAC3-214ENST00000495485 GRM1Q13255 1194 aa11.68□□□□□ -0.54
HDAC3-214ENST00000495485 NONOQ15233 471 aaKnown RBP eCLIP11.68□□□□□ -0.54
HDAC3-214ENST00000495485 CAMK4Q16566 473 aa11.68□□□□□ -0.54
HDAC3-214ENST00000495485 ARL6IP4Q66PJ3 421 aaKnown RBP11.68□□□□□ -0.54
HDAC3-214ENST00000495485 SLFN13Q68D06 897 aa11.68□□□□□ -0.54
HDAC3-214ENST00000495485 IFNL1Q8IU54 200 aa11.68□□□□□ -0.54
HDAC3-214ENST00000495485 LRRC47Q8N1G4 583 aaKnown RBP11.68□□□□□ -0.54
HDAC3-214ENST00000495485 ENGASEQ8NFI3 743 aa11.68□□□□□ -0.54
HDAC3-214ENST00000495485 PIBF1Q8WXW3 757 aa11.68□□□□□ -0.54
HDAC3-214ENST00000495485 TRIM44Q96DX7 344 aaPredicted RBP11.68□□□□□ -0.54
HDAC3-214ENST00000495485 GMCL1Q96IK5 515 aa11.68□□□□□ -0.54
HDAC3-214ENST00000495485 FTOQ9C0B1 505 aaKnown RBP eCLIP11.68□□□□□ -0.54
HDAC3-214ENST00000495485 VAT1LQ9HCJ6 419 aa11.68□□□□□ -0.54
HDAC3-214ENST00000495485 USP25Q9UHP3 1055 aa11.68□□□□□ -0.54
HDAC3-214ENST00000495485 FAM237AA0A1B0GTK4 181 aa11.67□□□□□ -0.54
HDAC3-214ENST00000495485 A0A1B0GVL5 298 aa11.67□□□□□ -0.54
HDAC3-214ENST00000495485 ZBTB5O15062 677 aa11.67□□□□□ -0.54
HDAC3-214ENST00000495485 RAD21O60216 631 aa11.67□□□□□ -0.54
HDAC3-214ENST00000495485 AOC2O75106 756 aa11.67□□□□□ -0.54
HDAC3-214ENST00000495485 ATP2B1P20020 1258 aa11.67□□□□□ -0.54
HDAC3-214ENST00000495485 HOXA7P31268 230 aaPredicted RBP11.67□□□□□ -0.54
HDAC3-214ENST00000495485 TXLNAP40222 546 aa11.67□□□□□ -0.54
HDAC3-214ENST00000495485 MRPL12P52815 198 aaKnown RBP11.67□□□□□ -0.54
HDAC3-214ENST00000495485 SEPT2Q15019 361 aa11.67□□□□□ -0.54
HDAC3-214ENST00000495485 ARHGEF6Q15052 776 aa11.67□□□□□ -0.54
HDAC3-214ENST00000495485 STX1AQ16623 288 aa11.67□□□□□ -0.54
HDAC3-214ENST00000495485 AXDND1Q5T1B0 1012 aaPredicted RBP11.67□□□□□ -0.54
HDAC3-214ENST00000495485 RESP18Q5W5W9 173 aa11.67□□□□□ -0.54
HDAC3-214ENST00000495485 WWC2Q6AWC2 1192 aa11.67□□□□□ -0.54
HDAC3-214ENST00000495485 PIK3AP1Q6ZUJ8 805 aa11.67□□□□□ -0.54
HDAC3-214ENST00000495485 HOMER1Q86YM7 354 aa11.67□□□□□ -0.54
HDAC3-214ENST00000495485 FMR1NBQ8N0W7 255 aaPredicted RBP11.67□□□□□ -0.54
HDAC3-214ENST00000495485 OXER1Q8TDS5 423 aa11.67□□□□□ -0.54
HDAC3-214ENST00000495485 PARK7Q99497 189 aaKnown RBP11.67□□□□□ -0.54
HDAC3-214ENST00000495485 FEZ1Q99689 392 aa11.67□□□□□ -0.54
HDAC3-214ENST00000495485 RBSNQ9H1K0 784 aa11.67□□□□□ -0.54
HDAC3-214ENST00000495485 ZFYVE28Q9HCC9 887 aa11.67□□□□□ -0.54
HDAC3-214ENST00000495485 GPCPD1Q9NPB8 672 aa11.67□□□□□ -0.54
HDAC3-214ENST00000495485 ANO10Q9NW15 660 aa11.67□□□□□ -0.54
HDAC3-214ENST00000495485 AGTPBP1Q9UPW5 1226 aa11.67□□□□□ -0.54
HDAC3-214ENST00000495485 TMX2Q9Y320 296 aa11.67□□□□□ -0.54
HDAC3-214ENST00000495485 FRMPD2Q68DX3 1309 aaPredicted RBP11.66□□□□□ -0.54
HDAC3-214ENST00000495485 CYTH3O43739 400 aa11.66□□□□□ -0.54
HDAC3-214ENST00000495485 PFKFB1P16118 471 aa11.66□□□□□ -0.54
HDAC3-214ENST00000495485 CTCFP49711 727 aaPredicted RBP11.66□□□□□ -0.54
HDAC3-214ENST00000495485 TOB1P50616 345 aaPredicted RBP11.66□□□□□ -0.54
HDAC3-214ENST00000495485 ADCY7P51828 1080 aa11.66□□□□□ -0.54
HDAC3-214ENST00000495485 TYRO3Q06418 890 aa11.66□□□□□ -0.54
HDAC3-214ENST00000495485 IKQ13123 557 aaPredicted RBP11.66□□□□□ -0.54
HDAC3-214ENST00000495485 SNW1Q13573 536 aaKnown RBP11.66□□□□□ -0.54
HDAC3-214ENST00000495485 RRP1BQ14684 758 aaKnown RBP11.66□□□□□ -0.54
HDAC3-214ENST00000495485 ADGRF4Q8IZF3 695 aa11.66□□□□□ -0.54
HDAC3-214ENST00000495485 CHURC1Q8WUH1 139 aa11.66□□□□□ -0.54
HDAC3-214ENST00000495485 BRI3BPQ8WY22 251 aa11.66□□□□□ -0.54
HDAC3-214ENST00000495485 GPKOWQ92917 476 aaPredicted RBP eCLIP11.66□□□□□ -0.54
HDAC3-214ENST00000495485 TNFRSF25Q93038 417 aa11.66□□□□□ -0.54
HDAC3-214ENST00000495485 PIGSQ96S52 555 aa11.66□□□□□ -0.54
HDAC3-214ENST00000495485 UBA5Q9GZZ9 404 aa11.66□□□□□ -0.54
HDAC3-214ENST00000495485 PCDHB6Q9Y5E3 794 aa11.66□□□□□ -0.54
HDAC3-214ENST00000495485 BAZ2BQ9UIF8 2168 aaKnown RBP11.65□□□□□ -0.54
HDAC3-214ENST00000495485 MYPNQ86TC9 1320 aa11.65□□□□□ -0.54
HDAC3-214ENST00000495485 F5H6K3 240 aa11.65□□□□□ -0.54
HDAC3-214ENST00000495485 BMP3P12645 472 aa11.65□□□□□ -0.54
HDAC3-214ENST00000495485 OSBPP22059 807 aa11.65□□□□□ -0.54
HDAC3-214ENST00000495485 LONP1P36776 959 aaKnown RBP11.65□□□□□ -0.54
HDAC3-214ENST00000495485 GCLCP48506 637 aaPredicted RBP11.65□□□□□ -0.54
HDAC3-214ENST00000495485 NDUFA8P51970 172 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms