RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 SEMA3EO15041 775 aa10.99□□□□□ -0.65
GARNL3-219ENST00000495172 SLC4A3P48751 1232 aa10.99□□□□□ -0.65
GARNL3-219ENST00000495172 TIMM10P62072 90 aa10.99□□□□□ -0.65
GARNL3-219ENST00000495172 HYAL1Q12794 435 aa10.99□□□□□ -0.65
GARNL3-219ENST00000495172 ABCB5Q2M3G0 1257 aa10.99□□□□□ -0.65
GARNL3-219ENST00000495172 DCLK2Q8N568 766 aa10.99□□□□□ -0.65
GARNL3-219ENST00000495172 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.99□□□□□ -0.65
GARNL3-219ENST00000495172 CRBNQ96SW2 442 aa10.99□□□□□ -0.65
GARNL3-219ENST00000495172 DHX36Q9H2U1 1008 aaKnown RBP10.99□□□□□ -0.65
GARNL3-219ENST00000495172 SMOC2Q9H3U7 446 aa10.99□□□□□ -0.65
GARNL3-219ENST00000495172 RAI14Q9P0K7 980 aa10.99□□□□□ -0.65
GARNL3-219ENST00000495172 DIS3Q9Y2L1 958 aaKnown RBP10.99□□□□□ -0.65
GARNL3-219ENST00000495172 TNKSO95271 1327 aa10.99□□□□□ -0.65
GARNL3-219ENST00000495172 OTOGLQ3ZCN5 2332 aa10.98□□□□□ -0.65
GARNL3-219ENST00000495172 MYO5AQ9Y4I1 1855 aaKnown RBP10.98□□□□□ -0.65
GARNL3-219ENST00000495172 E9PSI1 815 aa10.98□□□□□ -0.65
GARNL3-219ENST00000495172 GJB5O95377 273 aa10.98□□□□□ -0.65
GARNL3-219ENST00000495172 DYNLL1P63167 89 aaKnown RBP10.98□□□□□ -0.65
GARNL3-219ENST00000495172 FSCN1Q16658 493 aaKnown RBP10.98□□□□□ -0.65
GARNL3-219ENST00000495172 RSPO4Q2I0M5 234 aaPredicted RBP10.98□□□□□ -0.65
GARNL3-219ENST00000495172 EPC2Q52LR7 807 aa10.98□□□□□ -0.65
GARNL3-219ENST00000495172 SPTY2D1Q68D10 685 aaPredicted RBP10.98□□□□□ -0.65
GARNL3-219ENST00000495172 KCNG4Q8TDN1 519 aa10.98□□□□□ -0.65
GARNL3-219ENST00000495172 RAD9AQ99638 391 aa10.98□□□□□ -0.65
GARNL3-219ENST00000495172 SRCIN1Q9C0H9 1055 aa10.98□□□□□ -0.65
GARNL3-219ENST00000495172 KATNBL1Q9H079 304 aa10.98□□□□□ -0.65
GARNL3-219ENST00000495172 GINM1Q9NU53 330 aa10.98□□□□□ -0.65
GARNL3-219ENST00000495172 RIPK3Q9Y572 518 aa10.98□□□□□ -0.65
GARNL3-219ENST00000495172 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.98□□□□□ -0.65
GARNL3-219ENST00000495172 LOC730098B7Z3J9 87 aa10.97□□□□□ -0.65
GARNL3-219ENST00000495172 DYNC1LI2O43237 492 aaPredicted RBP10.97□□□□□ -0.65
GARNL3-219ENST00000495172 SMAD4Q13485 552 aaKnown RBP10.97□□□□□ -0.65
GARNL3-219ENST00000495172 GPM6BQ13491 265 aa10.97□□□□□ -0.65
GARNL3-219ENST00000495172 CCDC27Q2M243 656 aa10.97□□□□□ -0.65
GARNL3-219ENST00000495172 CTC1Q2NKJ3 1217 aa10.97□□□□□ -0.65
GARNL3-219ENST00000495172 CERKLQ49MI3 558 aaPredicted RBP10.97□□□□□ -0.65
GARNL3-219ENST00000495172 TIGD5Q53EQ6 642 aa10.97□□□□□ -0.65
GARNL3-219ENST00000495172 TATDN1Q6P1N9 297 aa10.97□□□□□ -0.65
GARNL3-219ENST00000495172 TLK2Q86UE8 772 aa10.97□□□□□ -0.65
GARNL3-219ENST00000495172 RPGRIP1Q96KN7 1286 aa10.97□□□□□ -0.65
GARNL3-219ENST00000495172 CHMP4AQ9BY43 222 aa10.97□□□□□ -0.65
GARNL3-219ENST00000495172 NSUN3Q9H649 340 aaKnown RBP10.97□□□□□ -0.65
GARNL3-219ENST00000495172 INCENPQ9NQS7 918 aa10.97□□□□□ -0.65
GARNL3-219ENST00000495172 DLL3Q9NYJ7 618 aa10.97□□□□□ -0.65
GARNL3-219ENST00000495172 HMG20BQ9P0W2 317 aa10.97□□□□□ -0.65
GARNL3-219ENST00000495172 PCDHGC5Q9Y5F6 944 aa10.97□□□□□ -0.65
GARNL3-219ENST00000495172 NLRC5Q86WI3 1866 aa10.97□□□□□ -0.65
GARNL3-219ENST00000495172 CACNA1FO60840 1977 aa10.96□□□□□ -0.65
GARNL3-219ENST00000495172 ALDH1L1O75891 902 aa10.96□□□□□ -0.65
GARNL3-219ENST00000495172 SP100P23497 879 aaPredicted RBP10.96□□□□□ -0.65
GARNL3-219ENST00000495172 SHMT1P34896 483 aa10.96□□□□□ -0.65
GARNL3-219ENST00000495172 TNFAIP2Q03169 654 aa10.96□□□□□ -0.65
GARNL3-219ENST00000495172 WDR43Q15061 677 aaKnown RBP eCLIP10.96□□□□□ -0.65
GARNL3-219ENST00000495172 MAMDC4Q6UXC1 1216 aa10.96□□□□□ -0.65
GARNL3-219ENST00000495172 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.96□□□□□ -0.65
GARNL3-219ENST00000495172 ARMCX2Q7L311 632 aa10.96□□□□□ -0.65
GARNL3-219ENST00000495172 RIOX2Q8IUF8 465 aa10.96□□□□□ -0.65
GARNL3-219ENST00000495172 MB21D1Q8N884 522 aa10.96□□□□□ -0.65
GARNL3-219ENST00000495172 CHAMP1Q96JM3 812 aa10.96□□□□□ -0.65
GARNL3-219ENST00000495172 RIPOR3Q96MK2 946 aa10.96□□□□□ -0.65
GARNL3-219ENST00000495172 PDGFCQ9NRA1 345 aa10.96□□□□□ -0.65
GARNL3-219ENST00000495172 SH2B1Q9NRF2 756 aaPredicted RBP10.96□□□□□ -0.65
GARNL3-219ENST00000495172 CD207Q9UJ71 328 aa10.96□□□□□ -0.65
GARNL3-219ENST00000495172 PA2G4Q9UQ80 394 aaKnown RBP10.96□□□□□ -0.65
GARNL3-219ENST00000495172 NBEAQ8NFP9 2946 aa10.95□□□□□ -0.66
GARNL3-219ENST00000495172 SLC25A27O95847 323 aa10.95□□□□□ -0.66
GARNL3-219ENST00000495172 LDHCP07864 332 aa10.95□□□□□ -0.66
GARNL3-219ENST00000495172 SMPD1P17405 629 aa10.95□□□□□ -0.66
GARNL3-219ENST00000495172 STAT3P40763 770 aa10.95□□□□□ -0.66
GARNL3-219ENST00000495172 GSTO1P78417 241 aa10.95□□□□□ -0.66
GARNL3-219ENST00000495172 COL9A3Q14050 684 aaPredicted RBP10.95□□□□□ -0.66
GARNL3-219ENST00000495172 PTPROQ16827 1216 aa10.95□□□□□ -0.66
GARNL3-219ENST00000495172 FAM47CQ5HY64 1035 aa10.95□□□□□ -0.66
GARNL3-219ENST00000495172 CCDC144CPQ8IYA2 1237 aa10.95□□□□□ -0.66
GARNL3-219ENST00000495172 DDX11Q96FC9 970 aa10.95□□□□□ -0.66
GARNL3-219ENST00000495172 ASH1LQ9NR48 2969 aaKnown RBP10.95□□□□□ -0.66
GARNL3-219ENST00000495172 CEP126Q9P2H0 1117 aa10.95□□□□□ -0.66
GARNL3-219ENST00000495172 ZNF214Q9UL59 606 aaPredicted RBP10.95□□□□□ -0.66
GARNL3-219ENST00000495172 GNEQ9Y223 722 aaKnown RBP10.95□□□□□ -0.66
GARNL3-219ENST00000495172 DNAJC25-GNG10A0A024R161 153 aa10.94□□□□□ -0.66
GARNL3-219ENST00000495172 MPHOSPH10O00566 681 aaKnown RBP10.94□□□□□ -0.66
GARNL3-219ENST00000495172 BAIAP3O94812 1187 aa10.94□□□□□ -0.66
GARNL3-219ENST00000495172 HLA-DOAP06340 250 aa10.94□□□□□ -0.66
GARNL3-219ENST00000495172 RRP1P56182 461 aaKnown RBP10.94□□□□□ -0.66
GARNL3-219ENST00000495172 NKX3-2P78367 333 aa10.94□□□□□ -0.66
GARNL3-219ENST00000495172 CNTN2Q02246 1040 aa10.94□□□□□ -0.66
GARNL3-219ENST00000495172 CALD1Q05682 793 aaKnown RBP10.94□□□□□ -0.66
GARNL3-219ENST00000495172 SIAH1Q8IUQ4 282 aa10.94□□□□□ -0.66
GARNL3-219ENST00000495172 REPS2Q8NFH8 660 aa10.94□□□□□ -0.66
GARNL3-219ENST00000495172 ABHD16BQ9H3Z7 469 aa10.94□□□□□ -0.66
GARNL3-219ENST00000495172 R4GN57 208 aa10.94□□□□□ -0.66
GARNL3-219ENST00000495172 MYO10Q9HD67 2058 aa10.93□□□□□ -0.66
GARNL3-219ENST00000495172 H3BNC9 293 aa10.93□□□□□ -0.66
GARNL3-219ENST00000495172 VAMP4O75379 141 aa10.93□□□□□ -0.66
GARNL3-219ENST00000495172 CABYRO75952 493 aa10.93□□□□□ -0.66
GARNL3-219ENST00000495172 RFC2P35250 354 aa10.93□□□□□ -0.66
GARNL3-219ENST00000495172 PLCD1P51178 756 aa10.93□□□□□ -0.66
GARNL3-219ENST00000495172 CHMP4BP1P59074 171 aa10.93□□□□□ -0.66
GARNL3-219ENST00000495172 CBX2Q14781 532 aaPredicted RBP10.93□□□□□ -0.66
GARNL3-219ENST00000495172 MCTP2Q6DN12 878 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms