RNA–Protein interactions for RNA: ENST00000494938.2

SCAP-213, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-213ENST00000494938 ASTN1O14525 1302 aa16.75■□□□□ 0.27
SCAP-213ENST00000494938 SYNGAP1Q96PV0 1343 aa16.75■□□□□ 0.27
SCAP-213ENST00000494938 SEPT4O43236 478 aa16.75■□□□□ 0.27
SCAP-213ENST00000494938 LIFRP42702 1097 aa16.75■□□□□ 0.27
SCAP-213ENST00000494938 CDC37Q16543 378 aaPredicted RBP16.75■□□□□ 0.27
SCAP-213ENST00000494938 QRICH1Q2TAL8 776 aa16.75■□□□□ 0.27
SCAP-213ENST00000494938 DHX32Q7L7V1 743 aaKnown RBP16.75■□□□□ 0.27
SCAP-213ENST00000494938 PIAS4Q8N2W9 510 aaPredicted RBP16.75■□□□□ 0.27
SCAP-213ENST00000494938 PAWRQ96IZ0 340 aaKnown RBP16.75■□□□□ 0.27
SCAP-213ENST00000494938 MAP3K14Q99558 947 aa16.75■□□□□ 0.27
SCAP-213ENST00000494938 RIOX1Q9H6W3 641 aa16.75■□□□□ 0.27
SCAP-213ENST00000494938 COL11A1P12107 1806 aaPredicted RBP16.75■□□□□ 0.27
SCAP-213ENST00000494938 ZNF236Q9UL36 1845 aa16.75■□□□□ 0.27
SCAP-213ENST00000494938 PFASO15067 1338 aa16.74■□□□□ 0.27
SCAP-213ENST00000494938 CYTH3O43739 400 aa16.74■□□□□ 0.27
SCAP-213ENST00000494938 MSCO60682 206 aa16.74■□□□□ 0.27
SCAP-213ENST00000494938 ANO1Q5XXA6 986 aa16.74■□□□□ 0.27
SCAP-213ENST00000494938 NSMFQ6X4W1 530 aa16.74■□□□□ 0.27
SCAP-213ENST00000494938 ZNF654Q8IZM8 581 aa16.74■□□□□ 0.27
SCAP-213ENST00000494938 RGS22Q8NE09 1264 aa16.74■□□□□ 0.27
SCAP-213ENST00000494938 TBC1D5Q92609 795 aa16.74■□□□□ 0.27
SCAP-213ENST00000494938 MYL10Q9BUA6 226 aa16.74■□□□□ 0.27
SCAP-213ENST00000494938 USP26Q9BXU7 913 aa16.74■□□□□ 0.27
SCAP-213ENST00000494938 SNX14Q9Y5W7 946 aa16.74■□□□□ 0.27
SCAP-213ENST00000494938 PPP1R11O60927 126 aaPredicted RBP16.73■□□□□ 0.27
SCAP-213ENST00000494938 REC8O95072 547 aa16.73■□□□□ 0.27
SCAP-213ENST00000494938 KRT32Q14532 448 aa16.73■□□□□ 0.27
SCAP-213ENST00000494938 USH1GQ495M9 461 aa16.73■□□□□ 0.27
SCAP-213ENST00000494938 FBXO11Q86XK2 927 aa16.73■□□□□ 0.27
SCAP-213ENST00000494938 CCDC144CPQ8IYA2 1237 aa16.73■□□□□ 0.27
SCAP-213ENST00000494938 NUP133Q8WUM0 1156 aa16.73■□□□□ 0.27
SCAP-213ENST00000494938 KATNBL1Q9H079 304 aa16.73■□□□□ 0.27
SCAP-213ENST00000494938 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.73■□□□□ 0.27
SCAP-213ENST00000494938 DDX49Q9Y6V7 483 aaKnown RBP16.73■□□□□ 0.27
SCAP-213ENST00000494938 RBBP6Q7Z6E9 1792 aaKnown RBP16.72■□□□□ 0.27
SCAP-213ENST00000494938 EPB41L2O43491 1005 aaKnown RBP16.72■□□□□ 0.27
SCAP-213ENST00000494938 DHX16O60231 1041 aaKnown RBP16.72■□□□□ 0.27
SCAP-213ENST00000494938 DDAH1O94760 285 aa16.72■□□□□ 0.27
SCAP-213ENST00000494938 COL6A1P12109 1028 aa16.72■□□□□ 0.27
SCAP-213ENST00000494938 ACVR2BQ13705 512 aa16.72■□□□□ 0.27
SCAP-213ENST00000494938 NFXL1Q6ZNB6 911 aa16.72■□□□□ 0.27
SCAP-213ENST00000494938 ARMCX2Q7L311 632 aa16.72■□□□□ 0.27
SCAP-213ENST00000494938 NECAB2Q7Z6G3 386 aa16.72■□□□□ 0.27
SCAP-213ENST00000494938 SGMS1Q86VZ5 419 aa16.72■□□□□ 0.27
SCAP-213ENST00000494938 TCEANC2Q96MN5 208 aa16.72■□□□□ 0.27
SCAP-213ENST00000494938 CNPY2Q9Y2B0 182 aa16.72■□□□□ 0.27
SCAP-213ENST00000494938 ABCB11O95342 1321 aa16.71■□□□□ 0.27
SCAP-213ENST00000494938 PTPDC1A2A3K4 754 aa16.71■□□□□ 0.27
SCAP-213ENST00000494938 CCDC69A6NI79 296 aa16.71■□□□□ 0.27
SCAP-213ENST00000494938 ZBTB5O15062 677 aa16.71■□□□□ 0.27
SCAP-213ENST00000494938 CPA1P15085 419 aa16.71■□□□□ 0.27
SCAP-213ENST00000494938 RPS6P62753 249 aaKnown RBP16.71■□□□□ 0.27
SCAP-213ENST00000494938 SLC30A10Q6XR72 485 aa16.71■□□□□ 0.27
SCAP-213ENST00000494938 RNF207Q6ZRF8 634 aa16.71■□□□□ 0.27
SCAP-213ENST00000494938 MORC4Q8TE76 937 aa16.71■□□□□ 0.27
SCAP-213ENST00000494938 PIGSQ96S52 555 aa16.71■□□□□ 0.27
SCAP-213ENST00000494938 ABHD16BQ9H3Z7 469 aa16.71■□□□□ 0.27
SCAP-213ENST00000494938 BRPF3Q9ULD4 1205 aa16.71■□□□□ 0.27
SCAP-213ENST00000494938 ASB14A6NK59 587 aa16.7■□□□□ 0.26
SCAP-213ENST00000494938 OPLAHO14841 1288 aa16.7■□□□□ 0.26
SCAP-213ENST00000494938 HMGB1P09429 215 aaKnown RBP16.7■□□□□ 0.26
SCAP-213ENST00000494938 RXRAP19793 462 aa16.7■□□□□ 0.26
SCAP-213ENST00000494938 CALML3P27482 149 aa16.7■□□□□ 0.26
SCAP-213ENST00000494938 SMARCA1P28370 1054 aa16.7■□□□□ 0.26
SCAP-213ENST00000494938 SRBD1Q8N5C6 995 aaKnown RBP16.7■□□□□ 0.26
SCAP-213ENST00000494938 FANCBQ8NB91 859 aa16.7■□□□□ 0.26
SCAP-213ENST00000494938 JAKMIP1Q96N16 626 aaKnown RBP16.7■□□□□ 0.26
SCAP-213ENST00000494938 AMNQ9BXJ7 453 aa16.7■□□□□ 0.26
SCAP-213ENST00000494938 MAF1Q9H063 256 aa16.7■□□□□ 0.26
SCAP-213ENST00000494938 C11orf49Q9H6J7 331 aa16.7■□□□□ 0.26
SCAP-213ENST00000494938 FAM184BQ9ULE4 1060 aa16.7■□□□□ 0.26
SCAP-213ENST00000494938 MRPL11Q9Y3B7 192 aaKnown RBP16.7■□□□□ 0.26
SCAP-213ENST00000494938 SLC12A7Q9Y666 1083 aa16.7■□□□□ 0.26
SCAP-213ENST00000494938 PNMA6FA0A0J9YX94 578 aa16.69■□□□□ 0.26
SCAP-213ENST00000494938 PLEKHA8P1O95397 391 aa16.69■□□□□ 0.26
SCAP-213ENST00000494938 AKR1A1P14550 325 aa16.69■□□□□ 0.26
SCAP-213ENST00000494938 KIF5BP33176 963 aa16.69■□□□□ 0.26
SCAP-213ENST00000494938 CCDC144BQ3MJ40 725 aa16.69■□□□□ 0.26
SCAP-213ENST00000494938 GJC2Q5T442 439 aaPredicted RBP16.69■□□□□ 0.26
SCAP-213ENST00000494938 RAB11FIP4Q86YS3 637 aa16.69■□□□□ 0.26
SCAP-213ENST00000494938 ARRDC4Q8NCT1 418 aa16.69■□□□□ 0.26
SCAP-213ENST00000494938 CTCFLQ8NI51 663 aaPredicted RBP16.69■□□□□ 0.26
SCAP-213ENST00000494938 SYTL5Q8TDW5 730 aaPredicted RBP16.69■□□□□ 0.26
SCAP-213ENST00000494938 DPF3Q92784 378 aa16.69■□□□□ 0.26
SCAP-213ENST00000494938 LENG1Q96BZ8 264 aaPredicted RBP16.69■□□□□ 0.26
SCAP-213ENST00000494938 LZTS2Q9BRK4 669 aa16.69■□□□□ 0.26
SCAP-213ENST00000494938 SPZ1Q9BXG8 430 aa16.69■□□□□ 0.26
SCAP-213ENST00000494938 COL20A1Q9P218 1284 aa16.69■□□□□ 0.26
SCAP-213ENST00000494938 ZHX1Q9UKY1 873 aaPredicted RBP16.69■□□□□ 0.26
SCAP-213ENST00000494938 PCDHA1Q9Y5I3 950 aa16.69■□□□□ 0.26
SCAP-213ENST00000494938 DNM1LO00429 736 aa16.68■□□□□ 0.26
SCAP-213ENST00000494938 ADCY6O43306 1168 aa16.68■□□□□ 0.26
SCAP-213ENST00000494938 CALM1P0DP23 149 aa16.68■□□□□ 0.26
SCAP-213ENST00000494938 CALM2P0DP24 149 aa16.68■□□□□ 0.26
SCAP-213ENST00000494938 CALM3P0DP25 149 aa16.68■□□□□ 0.26
SCAP-213ENST00000494938 RARBP10826 455 aa16.68■□□□□ 0.26
SCAP-213ENST00000494938 GNAQP50148 359 aa16.68■□□□□ 0.26
SCAP-213ENST00000494938 ALDH5A1P51649 535 aaPredicted RBP16.68■□□□□ 0.26
SCAP-213ENST00000494938 LRRC41Q15345 812 aa16.68■□□□□ 0.26
SCAP-213ENST00000494938 TAPT1Q6NXT6 567 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms