RNA–Protein interactions for RNA: ENST00000494746.1

CALCA-206, Transcript of calcitonin related polypeptide alpha, humanhuman

TSL 1 (best)

Gene CALCA, Length 1,837 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCA-206ENST00000494746 AIFM3Q96NN9 605 aa11.12□□□□□ -0.63
CALCA-206ENST00000494746 BEGAINQ9BUH8 593 aa11.12□□□□□ -0.63
CALCA-206ENST00000494746 HOMER2Q9NSB8 354 aa11.12□□□□□ -0.63
CALCA-206ENST00000494746 STK36Q9NRP7 1315 aa11.11□□□□□ -0.63
CALCA-206ENST00000494746 FSD2A1L4K1 749 aa11.11□□□□□ -0.63
CALCA-206ENST00000494746 ECM2O94769 699 aaPredicted RBP11.11□□□□□ -0.63
CALCA-206ENST00000494746 SCG2P13521 617 aa11.11□□□□□ -0.63
CALCA-206ENST00000494746 CAP1Q01518 475 aa11.11□□□□□ -0.63
CALCA-206ENST00000494746 SSRP1Q08945 709 aaKnown RBP11.11□□□□□ -0.63
CALCA-206ENST00000494746 TYW1BQ6NUM6 668 aa11.11□□□□□ -0.63
CALCA-206ENST00000494746 HEATR3Q7Z4Q2 680 aa11.11□□□□□ -0.63
CALCA-206ENST00000494746 FBXO11Q86XK2 927 aa11.11□□□□□ -0.63
CALCA-206ENST00000494746 TRIM22Q8IYM9 498 aa11.11□□□□□ -0.63
CALCA-206ENST00000494746 COA7Q96BR5 231 aa11.11□□□□□ -0.63
CALCA-206ENST00000494746 SHISA4Q96DD7 197 aa11.11□□□□□ -0.63
CALCA-206ENST00000494746 LLPHQ9BRT6 129 aaKnown RBP11.11□□□□□ -0.63
CALCA-206ENST00000494746 AMNQ9BXJ7 453 aa11.11□□□□□ -0.63
CALCA-206ENST00000494746 PDCL3Q9H2J4 239 aa11.11□□□□□ -0.63
CALCA-206ENST00000494746 EFCC1Q9HA90 598 aa11.11□□□□□ -0.63
CALCA-206ENST00000494746 LCTP09848 1927 aa11.11□□□□□ -0.63
CALCA-206ENST00000494746 DEXIO95424 95 aa11.1□□□□□ -0.63
CALCA-206ENST00000494746 ALAS1P13196 640 aa11.1□□□□□ -0.63
CALCA-206ENST00000494746 ERCC3P19447 782 aa11.1□□□□□ -0.63
CALCA-206ENST00000494746 CTGFP29279 349 aa11.1□□□□□ -0.63
CALCA-206ENST00000494746 RIOX2Q8IUF8 465 aa11.1□□□□□ -0.63
CALCA-206ENST00000494746 ORC3Q9UBD5 711 aaPredicted RBP11.1□□□□□ -0.63
CALCA-206ENST00000494746 PCDHA1Q9Y5I3 950 aa11.1□□□□□ -0.63
CALCA-206ENST00000494746 ZNFX1Q9P2E3 1918 aaKnown RBP11.1□□□□□ -0.63
CALCA-206ENST00000494746 CASP8AP2Q9UKL3 1982 aa11.1□□□□□ -0.63
CALCA-206ENST00000494746 NFIBO00712 420 aa11.09□□□□□ -0.63
CALCA-206ENST00000494746 OPLAHO14841 1288 aa11.09□□□□□ -0.63
CALCA-206ENST00000494746 LACTBP83111 547 aaPredicted RBP11.09□□□□□ -0.63
CALCA-206ENST00000494746 AKAP17AQ02040 695 aaKnown RBP11.09□□□□□ -0.63
CALCA-206ENST00000494746 MUM1L1Q5H9M0 696 aa11.09□□□□□ -0.63
CALCA-206ENST00000494746 NCAPG2Q86XI2 1143 aa11.09□□□□□ -0.63
CALCA-206ENST00000494746 TRERF1Q96PN7 1200 aa11.09□□□□□ -0.63
CALCA-206ENST00000494746 ARHGAP39Q9C0H5 1083 aa11.09□□□□□ -0.63
CALCA-206ENST00000494746 GJB4Q9NTQ9 266 aa11.09□□□□□ -0.63
CALCA-206ENST00000494746 RNF146Q9NTX7 359 aa11.09□□□□□ -0.63
CALCA-206ENST00000494746 FOXD4L1Q9NU39 408 aa11.09□□□□□ -0.63
CALCA-206ENST00000494746 BARHL2Q9NY43 387 aa11.09□□□□□ -0.63
CALCA-206ENST00000494746 RBM27Q9P2N5 1060 aaKnown RBP11.09□□□□□ -0.63
CALCA-206ENST00000494746 GPR25O00155 361 aa11.09□□□□□ -0.63
CALCA-206ENST00000494746 STXBP3O00186 592 aa11.09□□□□□ -0.63
CALCA-206ENST00000494746 XRCC6P12956 609 aaKnown RBP eCLIP11.09□□□□□ -0.63
CALCA-206ENST00000494746 CCNA1P78396 465 aa11.09□□□□□ -0.63
CALCA-206ENST00000494746 WDR78Q5VTH9 848 aa11.09□□□□□ -0.63
CALCA-206ENST00000494746 ZNF296Q8WUU4 475 aaPredicted RBP11.09□□□□□ -0.63
CALCA-206ENST00000494746 CLEC4DQ8WXI8 215 aa11.09□□□□□ -0.63
CALCA-206ENST00000494746 VPS54Q9P1Q0 977 aa11.09□□□□□ -0.63
CALCA-206ENST00000494746 ABCB11O95342 1321 aa11.09□□□□□ -0.63
CALCA-206ENST00000494746 SLC25A27O95847 323 aa11.08□□□□□ -0.64
CALCA-206ENST00000494746 GJB2P29033 226 aa11.08□□□□□ -0.64
CALCA-206ENST00000494746 HMGN5P82970 282 aaKnown RBP11.08□□□□□ -0.64
CALCA-206ENST00000494746 SP3Q02447 781 aa11.08□□□□□ -0.64
CALCA-206ENST00000494746 GPR142Q7Z601 462 aa11.08□□□□□ -0.64
CALCA-206ENST00000494746 SHCBP1Q8NEM2 672 aa11.08□□□□□ -0.64
CALCA-206ENST00000494746 INTS4Q96HW7 963 aaKnown RBP11.08□□□□□ -0.64
CALCA-206ENST00000494746 MROH8Q9H579 483 aa11.08□□□□□ -0.64
CALCA-206ENST00000494746 ACAD9Q9H845 621 aa11.08□□□□□ -0.64
CALCA-206ENST00000494746 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.08□□□□□ -0.64
CALCA-206ENST00000494746 ZNF236Q9UL36 1845 aa11.08□□□□□ -0.64
CALCA-206ENST00000494746 PLXNA1Q9UIW2 1896 aa11.08□□□□□ -0.64
CALCA-206ENST00000494746 hCG_1984214I3L0E3 225 aa11.07□□□□□ -0.64
CALCA-206ENST00000494746 FOXN1O15353 648 aa11.07□□□□□ -0.64
CALCA-206ENST00000494746 HSPA1AP0DMV8 641 aaKnown RBP11.07□□□□□ -0.64
CALCA-206ENST00000494746 HSPA1BP0DMV9 641 aaKnown RBP11.07□□□□□ -0.64
CALCA-206ENST00000494746 MRE11P49959 708 aa11.07□□□□□ -0.64
CALCA-206ENST00000494746 FOSBP53539 338 aa11.07□□□□□ -0.64
CALCA-206ENST00000494746 NAPAP54920 295 aa11.07□□□□□ -0.64
CALCA-206ENST00000494746 TKFCQ3LXA3 575 aa11.07□□□□□ -0.64
CALCA-206ENST00000494746 NOM1Q5C9Z4 860 aaKnown RBP11.07□□□□□ -0.64
CALCA-206ENST00000494746 ZNF713Q8N859 430 aaPredicted RBP11.07□□□□□ -0.64
CALCA-206ENST00000494746 SPRYD3Q8NCJ5 442 aa11.07□□□□□ -0.64
CALCA-206ENST00000494746 CHST13Q8NET6 341 aa11.07□□□□□ -0.64
CALCA-206ENST00000494746 TRIM47Q96LD4 638 aa11.07□□□□□ -0.64
CALCA-206ENST00000494746 ALG1Q9BT22 464 aa11.07□□□□□ -0.64
CALCA-206ENST00000494746 PNMA2Q9UL42 364 aa11.07□□□□□ -0.64
CALCA-206ENST00000494746 SMC3Q9UQE7 1217 aa11.07□□□□□ -0.64
CALCA-206ENST00000494746 ADAMTS3O15072 1205 aa11.07□□□□□ -0.64
CALCA-206ENST00000494746 MAPK4P31152 587 aa11.07□□□□□ -0.64
CALCA-206ENST00000494746 PPP1R18Q6NYC8 613 aa11.07□□□□□ -0.64
CALCA-206ENST00000494746 CCAR1Q8IX12 1150 aaKnown RBP11.07□□□□□ -0.64
CALCA-206ENST00000494746 CD99L2Q8TCZ2 262 aa11.07□□□□□ -0.64
CALCA-206ENST00000494746 TBC1D5Q92609 795 aa11.07□□□□□ -0.64
CALCA-206ENST00000494746 A1CFQ9NQ94 594 aaKnown RBP11.07□□□□□ -0.64
CALCA-206ENST00000494746 MRPL11Q9Y3B7 192 aaKnown RBP11.07□□□□□ -0.64
CALCA-206ENST00000494746 MCM3APO60318 1980 aa11.06□□□□□ -0.64
CALCA-206ENST00000494746 COPB2P35606 906 aa11.06□□□□□ -0.64
CALCA-206ENST00000494746 PSMC4P43686 418 aa11.06□□□□□ -0.64
CALCA-206ENST00000494746 NPY5RQ15761 445 aa11.06□□□□□ -0.64
CALCA-206ENST00000494746 NSMFQ6X4W1 530 aa11.06□□□□□ -0.64
CALCA-206ENST00000494746 SLC30A10Q6XR72 485 aa11.06□□□□□ -0.64
CALCA-206ENST00000494746 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.06□□□□□ -0.64
CALCA-206ENST00000494746 PLEKHH3Q7Z736 793 aa11.06□□□□□ -0.64
CALCA-206ENST00000494746 FAM184AQ8NB25 1140 aa11.06□□□□□ -0.64
CALCA-206ENST00000494746 WASF1Q92558 559 aa11.06□□□□□ -0.64
CALCA-206ENST00000494746 FBXO40Q9UH90 709 aa11.06□□□□□ -0.64
CALCA-206ENST00000494746 KCNJ14Q9UNX9 436 aa11.06□□□□□ -0.64
CALCA-206ENST00000494746 SMCO2A6NFE2 343 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms