RNA–Protein interactions for RNA: ENST00000494582.1

LINC00488-201, long intergenic non-protein coding RNA 488, humanhuman

TSL 1 (best) BASIC

Gene LINC00488, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00488-201ENST00000494582 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.26□□□□□ -0.61
LINC00488-201ENST00000494582 C15orf41Q9Y2V0 281 aa11.26□□□□□ -0.61
LINC00488-201ENST00000494582 TACC3Q9Y6A5 838 aa11.26□□□□□ -0.61
LINC00488-201ENST00000494582 RGPD8O14715 1765 aaPredicted RBP11.26□□□□□ -0.61
LINC00488-201ENST00000494582 C5orf60A6NFR6 353 aa11.26□□□□□ -0.61
LINC00488-201ENST00000494582 HMGB1P1B2RPK0 211 aaPredicted RBP11.26□□□□□ -0.61
LINC00488-201ENST00000494582 GPAA1O43292 621 aa11.26□□□□□ -0.61
LINC00488-201ENST00000494582 HEXIM1O94992 359 aaKnown RBP11.26□□□□□ -0.61
LINC00488-201ENST00000494582 PRCPP42785 496 aa11.26□□□□□ -0.61
LINC00488-201ENST00000494582 SLC39A6Q13433 755 aa11.26□□□□□ -0.61
LINC00488-201ENST00000494582 CDC37Q16543 378 aaPredicted RBP11.26□□□□□ -0.61
LINC00488-201ENST00000494582 AKAP4Q5JQC9 854 aa11.26□□□□□ -0.61
LINC00488-201ENST00000494582 MAATS1Q7Z4T9 603 aa11.26□□□□□ -0.61
LINC00488-201ENST00000494582 MREGQ8N565 214 aa11.26□□□□□ -0.61
LINC00488-201ENST00000494582 SH2D4AQ9H788 454 aa11.26□□□□□ -0.61
LINC00488-201ENST00000494582 LMO7Q8WWI1 1683 aa11.25□□□□□ -0.61
LINC00488-201ENST00000494582 RGPD2P0DJD1 1756 aa11.25□□□□□ -0.61
LINC00488-201ENST00000494582 SRRM3A6NNA2 597 aaPredicted RBP11.25□□□□□ -0.61
LINC00488-201ENST00000494582 B4DLN1 442 aa11.25□□□□□ -0.61
LINC00488-201ENST00000494582 H0YGN5 161 aa11.25□□□□□ -0.61
LINC00488-201ENST00000494582 KIF5AQ12840 1032 aa11.25□□□□□ -0.61
LINC00488-201ENST00000494582 UAP1Q16222 522 aaPredicted RBP11.25□□□□□ -0.61
LINC00488-201ENST00000494582 CCDC96Q2M329 555 aa11.25□□□□□ -0.61
LINC00488-201ENST00000494582 NFXL1Q6ZNB6 911 aa11.25□□□□□ -0.61
LINC00488-201ENST00000494582 ACSBG1Q96GR2 724 aa11.25□□□□□ -0.61
LINC00488-201ENST00000494582 TLR10Q9BXR5 811 aa11.25□□□□□ -0.61
LINC00488-201ENST00000494582 PUS3Q9BZE2 481 aaKnown RBP11.25□□□□□ -0.61
LINC00488-201ENST00000494582 NFS1Q9Y697 457 aa11.25□□□□□ -0.61
LINC00488-201ENST00000494582 A0A087WZG4 1122 aa11.25□□□□□ -0.61
LINC00488-201ENST00000494582 EIF4E1BA6NMX2 242 aaKnown RBP11.25□□□□□ -0.61
LINC00488-201ENST00000494582 CYLC1P35663 651 aaPredicted RBP11.25□□□□□ -0.61
LINC00488-201ENST00000494582 FOXO4P98177 505 aa11.25□□□□□ -0.61
LINC00488-201ENST00000494582 SPAG1Q07617 926 aa11.25□□□□□ -0.61
LINC00488-201ENST00000494582 PPP1R7Q15435 360 aa11.25□□□□□ -0.61
LINC00488-201ENST00000494582 ARMC3Q5W041 872 aa11.25□□□□□ -0.61
LINC00488-201ENST00000494582 CAPRIN2Q6IMN6 1127 aaKnown RBP11.25□□□□□ -0.61
LINC00488-201ENST00000494582 ANKRD13CQ8N6S4 541 aa11.25□□□□□ -0.61
LINC00488-201ENST00000494582 TCP11Q8WWU5 503 aa11.25□□□□□ -0.61
LINC00488-201ENST00000494582 FOXP1Q9H334 677 aaPredicted RBP11.25□□□□□ -0.61
LINC00488-201ENST00000494582 PANK4Q9NVE7 773 aa11.25□□□□□ -0.61
LINC00488-201ENST00000494582 SNUPNO95149 360 aaKnown RBP11.24□□□□□ -0.61
LINC00488-201ENST00000494582 LINGO3P0C6S8 592 aa11.24□□□□□ -0.61
LINC00488-201ENST00000494582 CEBPAP49715 358 aaPredicted RBP11.24□□□□□ -0.61
LINC00488-201ENST00000494582 RAB27AP51159 221 aa11.24□□□□□ -0.61
LINC00488-201ENST00000494582 IFFO1Q0D2I5 559 aa11.24□□□□□ -0.61
LINC00488-201ENST00000494582 LRP10Q7Z4F1 713 aa11.24□□□□□ -0.61
LINC00488-201ENST00000494582 CACNA2D3Q8IZS8 1091 aa11.24□□□□□ -0.61
LINC00488-201ENST00000494582 TRIM58Q8NG06 486 aa11.24□□□□□ -0.61
LINC00488-201ENST00000494582 AGAP11Q8TF27 550 aa11.24□□□□□ -0.61
LINC00488-201ENST00000494582 SAAL1Q96ER3 474 aa11.24□□□□□ -0.61
LINC00488-201ENST00000494582 L3MBTL3Q96JM7 780 aaPredicted RBP11.24□□□□□ -0.61
LINC00488-201ENST00000494582 YIPF3Q9GZM5 350 aa11.24□□□□□ -0.61
LINC00488-201ENST00000494582 HYOU1Q9Y4L1 999 aa11.24□□□□□ -0.61
LINC00488-201ENST00000494582 PDS5AQ29RF7 1337 aaKnown RBP11.24□□□□□ -0.61
LINC00488-201ENST00000494582 RICTORQ6R327 1708 aa11.24□□□□□ -0.61
LINC00488-201ENST00000494582 A0A1W2PQC6 194 aa11.24□□□□□ -0.61
LINC00488-201ENST00000494582 PRLRP16471 622 aa11.24□□□□□ -0.61
LINC00488-201ENST00000494582 DRD4P21917 467 aa11.24□□□□□ -0.61
LINC00488-201ENST00000494582 ABL2P42684 1182 aa11.24□□□□□ -0.61
LINC00488-201ENST00000494582 CCDC181Q5TID7 509 aa11.24□□□□□ -0.61
LINC00488-201ENST00000494582 MSL1Q68DK7 614 aa11.24□□□□□ -0.61
LINC00488-201ENST00000494582 NBPF10Q6P3W6 841 aaKnown RBP11.24□□□□□ -0.61
LINC00488-201ENST00000494582 PDXDC2PQ6P474 469 aa11.24□□□□□ -0.61
LINC00488-201ENST00000494582 IFT20Q8IY31 132 aa11.24□□□□□ -0.61
LINC00488-201ENST00000494582 C1orf131Q8NDD1 294 aaKnown RBP11.24□□□□□ -0.61
LINC00488-201ENST00000494582 SPAG5Q96R06 1193 aa11.24□□□□□ -0.61
LINC00488-201ENST00000494582 NDST4Q9H3R1 872 aa11.24□□□□□ -0.61
LINC00488-201ENST00000494582 C5P01031 1676 aa11.23□□□□□ -0.61
LINC00488-201ENST00000494582 MAP3K13O43283 966 aa11.23□□□□□ -0.61
LINC00488-201ENST00000494582 TACC1O75410 805 aa11.23□□□□□ -0.61
LINC00488-201ENST00000494582 CLTAP09496 248 aa11.23□□□□□ -0.61
LINC00488-201ENST00000494582 ECHS1P30084 290 aa11.23□□□□□ -0.61
LINC00488-201ENST00000494582 ZAP70P43403 619 aa11.23□□□□□ -0.61
LINC00488-201ENST00000494582 DNA2P51530 1060 aa11.23□□□□□ -0.61
LINC00488-201ENST00000494582 PAK2Q13177 524 aa11.23□□□□□ -0.61
LINC00488-201ENST00000494582 SAFBQ15424 915 aaKnown RBP eCLIP11.23□□□□□ -0.61
LINC00488-201ENST00000494582 TSR1Q2NL82 804 aaKnown RBP11.23□□□□□ -0.61
LINC00488-201ENST00000494582 TMEM67Q5HYA8 995 aa11.23□□□□□ -0.61
LINC00488-201ENST00000494582 PROCA1Q8NCQ7 364 aaPredicted RBP11.23□□□□□ -0.61
LINC00488-201ENST00000494582 ESF1Q9H501 851 aaKnown RBP11.23□□□□□ -0.61
LINC00488-201ENST00000494582 BATF3Q9NR55 127 aa11.23□□□□□ -0.61
LINC00488-201ENST00000494582 PCDHA13Q9Y5I0 950 aa11.23□□□□□ -0.61
LINC00488-201ENST00000494582 NUTM2BA6NNL0 878 aaPredicted RBP11.23□□□□□ -0.61
LINC00488-201ENST00000494582 NUTM2EB1AL46 878 aaPredicted RBP11.23□□□□□ -0.61
LINC00488-201ENST00000494582 SRGNP10124 158 aa11.23□□□□□ -0.61
LINC00488-201ENST00000494582 MYBL1P10243 752 aa11.23□□□□□ -0.61
LINC00488-201ENST00000494582 IFNAR1P17181 557 aa11.23□□□□□ -0.61
LINC00488-201ENST00000494582 HSD17B3P37058 310 aa11.23□□□□□ -0.61
LINC00488-201ENST00000494582 HSPA9P38646 679 aaKnown RBP11.23□□□□□ -0.61
LINC00488-201ENST00000494582 RPS6KA3P51812 740 aa11.23□□□□□ -0.61
LINC00488-201ENST00000494582 RBM5P52756 815 aaKnown RBP eCLIP11.23□□□□□ -0.61
LINC00488-201ENST00000494582 RWDD2BP57060 319 aa11.23□□□□□ -0.61
LINC00488-201ENST00000494582 ZNF844Q08AG5 666 aa11.23□□□□□ -0.61
LINC00488-201ENST00000494582 HLFQ16534 295 aa11.23□□□□□ -0.61
LINC00488-201ENST00000494582 ANKRD13DQ6ZTN6 518 aa11.23□□□□□ -0.61
LINC00488-201ENST00000494582 CCDC170Q8IYT3 715 aa11.23□□□□□ -0.61
LINC00488-201ENST00000494582 APPBP2Q92624 585 aa11.23□□□□□ -0.61
LINC00488-201ENST00000494582 MTMR8Q96EF0 704 aa11.23□□□□□ -0.61
LINC00488-201ENST00000494582 KCNMB3Q9NPA1 279 aa11.23□□□□□ -0.61
LINC00488-201ENST00000494582 ARHGAP20Q9P2F6 1191 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms