RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 CYP2C18P33260 490 aa11.4□□□□□ -0.58
UBR4-216ENST00000494503 PBX2P40425 430 aa11.4□□□□□ -0.58
UBR4-216ENST00000494503 FSCN1Q16658 493 aaKnown RBP11.4□□□□□ -0.58
UBR4-216ENST00000494503 CCSAPQ6IQ19 270 aaPredicted RBP11.4□□□□□ -0.58
UBR4-216ENST00000494503 PSRC1Q6PGN9 363 aaPredicted RBP11.4□□□□□ -0.58
UBR4-216ENST00000494503 ZNF365Q70YC5 407 aa11.4□□□□□ -0.58
UBR4-216ENST00000494503 RASGRP2Q7LDG7 609 aa11.4□□□□□ -0.58
UBR4-216ENST00000494503 OTUD7AQ8TE49 926 aaPredicted RBP11.4□□□□□ -0.58
UBR4-216ENST00000494503 STAG1Q8WVM7 1258 aa11.4□□□□□ -0.58
UBR4-216ENST00000494503 FGD4Q96M96 766 aa11.4□□□□□ -0.58
UBR4-216ENST00000494503 UPF3AQ9H1J1 476 aaKnown RBP11.4□□□□□ -0.58
UBR4-216ENST00000494503 MTIF3Q9H2K0 278 aaKnown RBP11.4□□□□□ -0.58
UBR4-216ENST00000494503 HIPK3Q9H422 1215 aa11.4□□□□□ -0.58
UBR4-216ENST00000494503 PRDM12Q9H4Q4 367 aa11.4□□□□□ -0.58
UBR4-216ENST00000494503 MSRAQ9UJ68 235 aa11.4□□□□□ -0.58
UBR4-216ENST00000494503 SYNPO2Q9UMS6 1093 aa11.4□□□□□ -0.58
UBR4-216ENST00000494503 PLIN4Q96Q06 1357 aa11.4□□□□□ -0.59
UBR4-216ENST00000494503 PTPDC1A2A3K4 754 aa11.39□□□□□ -0.59
UBR4-216ENST00000494503 SOWAHBA6NEL2 793 aa11.39□□□□□ -0.59
UBR4-216ENST00000494503 LRRC37A2A6NM11 1700 aa11.39□□□□□ -0.59
UBR4-216ENST00000494503 ZBBXA8MT70 800 aa11.39□□□□□ -0.59
UBR4-216ENST00000494503 CCL23P55773 120 aa11.39□□□□□ -0.59
UBR4-216ENST00000494503 CHMP4BP1P59074 171 aa11.39□□□□□ -0.59
UBR4-216ENST00000494503 ITGA7Q13683 1181 aa11.39□□□□□ -0.59
UBR4-216ENST00000494503 CCDC85BQ15834 202 aaPredicted RBP11.39□□□□□ -0.59
UBR4-216ENST00000494503 TKFCQ3LXA3 575 aa11.39□□□□□ -0.59
UBR4-216ENST00000494503 MUM1L1Q5H9M0 696 aa11.39□□□□□ -0.59
UBR4-216ENST00000494503 TMEM240Q5SV17 173 aa11.39□□□□□ -0.59
UBR4-216ENST00000494503 OTOP2Q7RTS6 562 aa11.39□□□□□ -0.59
UBR4-216ENST00000494503 FAM126BQ8IXS8 530 aa11.39□□□□□ -0.59
UBR4-216ENST00000494503 MICALL1Q8N3F8 863 aa11.39□□□□□ -0.59
UBR4-216ENST00000494503 IL27Q8NEV9 243 aa11.39□□□□□ -0.59
UBR4-216ENST00000494503 SYMPKQ92797 1274 aaKnown RBP11.39□□□□□ -0.59
UBR4-216ENST00000494503 GMCL1Q96IK5 515 aa11.39□□□□□ -0.59
UBR4-216ENST00000494503 PBX4Q9BYU1 374 aa11.39□□□□□ -0.59
UBR4-216ENST00000494503 INCENPQ9NQS7 918 aa11.39□□□□□ -0.59
UBR4-216ENST00000494503 PRR12Q9ULL5 1215 aa11.39□□□□□ -0.59
UBR4-216ENST00000494503 FRMPD2Q68DX3 1309 aaPredicted RBP11.38□□□□□ -0.59
UBR4-216ENST00000494503 SMPD1P17405 629 aa11.38□□□□□ -0.59
UBR4-216ENST00000494503 SLC16A2P36021 539 aa11.38□□□□□ -0.59
UBR4-216ENST00000494503 CDK7P50613 346 aa11.38□□□□□ -0.59
UBR4-216ENST00000494503 PSMC6P62333 389 aa11.38□□□□□ -0.59
UBR4-216ENST00000494503 FAM47CQ5HY64 1035 aa11.38□□□□□ -0.59
UBR4-216ENST00000494503 ZMYM1Q5SVZ6 1142 aa11.38□□□□□ -0.59
UBR4-216ENST00000494503 RCSD1Q6JBY9 416 aa11.38□□□□□ -0.59
UBR4-216ENST00000494503 KIAA1211Q6ZU35 1233 aa11.38□□□□□ -0.59
UBR4-216ENST00000494503 FAM133AQ8N9E0 248 aa11.38□□□□□ -0.59
UBR4-216ENST00000494503 USP38Q8NB14 1042 aa11.38□□□□□ -0.59
UBR4-216ENST00000494503 PI4K2BQ8TCG2 481 aa11.38□□□□□ -0.59
UBR4-216ENST00000494503 PURBQ96QR8 312 aaKnown RBP11.38□□□□□ -0.59
UBR4-216ENST00000494503 PDGFCQ9NRA1 345 aa11.38□□□□□ -0.59
UBR4-216ENST00000494503 ZNF536O15090 1300 aa11.37□□□□□ -0.59
UBR4-216ENST00000494503 CABYRO75952 493 aa11.37□□□□□ -0.59
UBR4-216ENST00000494503 FGBP02675 491 aa11.37□□□□□ -0.59
UBR4-216ENST00000494503 MYL3P08590 195 aa11.37□□□□□ -0.59
UBR4-216ENST00000494503 CALML3P27482 149 aa11.37□□□□□ -0.59
UBR4-216ENST00000494503 RAB30Q15771 203 aa11.37□□□□□ -0.59
UBR4-216ENST00000494503 ANKRD45Q5TZF3 282 aa11.37□□□□□ -0.59
UBR4-216ENST00000494503 C16orf59Q7L2K0 433 aa11.37□□□□□ -0.59
UBR4-216ENST00000494503 KATNBL1Q9H079 304 aa11.37□□□□□ -0.59
UBR4-216ENST00000494503 TRPV6Q9H1D0 765 aa11.37□□□□□ -0.59
UBR4-216ENST00000494503 NKX2-4Q9H2Z4 354 aa11.37□□□□□ -0.59
UBR4-216ENST00000494503 SLC28A3Q9HAS3 691 aa11.37□□□□□ -0.59
UBR4-216ENST00000494503 GPCPD1Q9NPB8 672 aa11.37□□□□□ -0.59
UBR4-216ENST00000494503 IL23AQ9NPF7 189 aa11.37□□□□□ -0.59
UBR4-216ENST00000494503 GPHNQ9NQX3 736 aaPredicted RBP11.37□□□□□ -0.59
UBR4-216ENST00000494503 CYP39A1Q9NYL5 469 aa11.37□□□□□ -0.59
UBR4-216ENST00000494503 LCTP09848 1927 aa11.37□□□□□ -0.59
UBR4-216ENST00000494503 ASTN1O14525 1302 aa11.36□□□□□ -0.59
UBR4-216ENST00000494503 UMODL1Q5DID0 1318 aa11.36□□□□□ -0.59
UBR4-216ENST00000494503 B4GALT4O60513 344 aa11.36□□□□□ -0.59
UBR4-216ENST00000494503 TJAP1Q5JTD0 557 aa11.36□□□□□ -0.59
UBR4-216ENST00000494503 VPS53Q5VIR6 699 aa11.36□□□□□ -0.59
UBR4-216ENST00000494503 TTBK2Q6IQ55 1244 aa11.36□□□□□ -0.59
UBR4-216ENST00000494503 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.36□□□□□ -0.59
UBR4-216ENST00000494503 SCLYQ96I15 445 aa11.36□□□□□ -0.59
UBR4-216ENST00000494503 VTA1Q9NP79 307 aa11.36□□□□□ -0.59
UBR4-216ENST00000494503 PRDM6Q9NQX0 595 aa11.36□□□□□ -0.59
UBR4-216ENST00000494503 IL17RBQ9NRM6 502 aa11.36□□□□□ -0.59
UBR4-216ENST00000494503 CXXC1Q9P0U4 656 aaPredicted RBP11.36□□□□□ -0.59
UBR4-216ENST00000494503 ADD3Q9UEY8 706 aaKnown RBP11.36□□□□□ -0.59
UBR4-216ENST00000494503 GNEQ9Y223 722 aaKnown RBP11.36□□□□□ -0.59
UBR4-216ENST00000494503 PCDHB15Q9Y5E8 787 aa11.36□□□□□ -0.59
UBR4-216ENST00000494503 TRIM6-TRIM34B2RNG4 842 aa11.35□□□□□ -0.59
UBR4-216ENST00000494503 CTAGE5O15320 804 aa11.35□□□□□ -0.59
UBR4-216ENST00000494503 ICAM1P05362 532 aa11.35□□□□□ -0.59
UBR4-216ENST00000494503 RABGGTBP53611 331 aa11.35□□□□□ -0.59
UBR4-216ENST00000494503 HAND2P61296 217 aa11.35□□□□□ -0.59
UBR4-216ENST00000494503 BAATQ14032 418 aaPredicted RBP11.35□□□□□ -0.59
UBR4-216ENST00000494503 SKIV2LQ15477 1246 aaKnown RBP11.35□□□□□ -0.59
UBR4-216ENST00000494503 BRDTQ58F21 947 aaPredicted RBP11.35□□□□□ -0.59
UBR4-216ENST00000494503 TMEM63BQ5T3F8 832 aa11.35□□□□□ -0.59
UBR4-216ENST00000494503 SYDE2Q5VT97 1194 aa11.35□□□□□ -0.59
UBR4-216ENST00000494503 PPP2R2DQ66LE6 453 aa11.35□□□□□ -0.59
UBR4-216ENST00000494503 IQSEC1Q6DN90 963 aa11.35□□□□□ -0.59
UBR4-216ENST00000494503 DEFB128Q7Z7B8 93 aa11.35□□□□□ -0.59
UBR4-216ENST00000494503 OR6J1Q8NGC5 347 aa11.35□□□□□ -0.59
UBR4-216ENST00000494503 DCAF4Q8WV16 495 aa11.35□□□□□ -0.59
UBR4-216ENST00000494503 MPHOSPH6Q99547 160 aaKnown RBP11.35□□□□□ -0.59
UBR4-216ENST00000494503 WDR11Q9BZH6 1224 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms