RNA–Protein interactions for RNA: ENST00000494268.1

MSL3-217, Transcript of MSL complex subunit 3, humanhuman

TSL 2

Gene MSL3, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-217ENST00000494268 SHISA4Q96DD7 197 aa8.78□□□□□ -1
MSL3-217ENST00000494268 DEPDC7Q96QD5 511 aa8.78□□□□□ -1
MSL3-217ENST00000494268 SRPK1Q96SB4 655 aaKnown RBP8.78□□□□□ -1
MSL3-217ENST00000494268 ZNF503-AS2A6NEH8 195 aa8.77□□□□□ -1.01
MSL3-217ENST00000494268 NRDCO43847 1150 aa8.77□□□□□ -1.01
MSL3-217ENST00000494268 THBDP07204 575 aa8.77□□□□□ -1.01
MSL3-217ENST00000494268 PRSS53Q2L4Q9 553 aa8.77□□□□□ -1.01
MSL3-217ENST00000494268 MTERF2Q49AM1 385 aa8.77□□□□□ -1.01
MSL3-217ENST00000494268 HLA-DQA1Q5Y7H0 255 aa8.77□□□□□ -1.01
MSL3-217ENST00000494268 LNPKQ9C0E8 428 aa8.77□□□□□ -1.01
MSL3-217ENST00000494268 OSBPL2Q9H1P3 480 aa8.77□□□□□ -1.01
MSL3-217ENST00000494268 CLEC1BQ9P126 229 aa8.77□□□□□ -1.01
MSL3-217ENST00000494268 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.77□□□□□ -1.01
MSL3-217ENST00000494268 A0A1W2PQ45 241 aaPredicted RBP8.76□□□□□ -1.01
MSL3-217ENST00000494268 A0A1W2PQY0 241 aa8.76□□□□□ -1.01
MSL3-217ENST00000494268 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.76□□□□□ -1.01
MSL3-217ENST00000494268 ARNTLO00327 626 aa8.76□□□□□ -1.01
MSL3-217ENST00000494268 DIAPH1O60610 1272 aaKnown RBP8.76□□□□□ -1.01
MSL3-217ENST00000494268 GLI1P08151 1106 aa8.76□□□□□ -1.01
MSL3-217ENST00000494268 PLS3P13797 630 aa8.76□□□□□ -1.01
MSL3-217ENST00000494268 ECI1P42126 302 aa8.76□□□□□ -1.01
MSL3-217ENST00000494268 NLRX1Q86UT6 975 aa8.76□□□□□ -1.01
MSL3-217ENST00000494268 CPNE8Q86YQ8 564 aa8.76□□□□□ -1.01
MSL3-217ENST00000494268 LILRA2Q8N149 483 aa8.76□□□□□ -1.01
MSL3-217ENST00000494268 FRS2Q8WU20 508 aa8.76□□□□□ -1.01
MSL3-217ENST00000494268 LIN37Q96GY3 246 aaPredicted RBP8.76□□□□□ -1.01
MSL3-217ENST00000494268 ARHGEF4Q9NR80 690 aa8.76□□□□□ -1.01
MSL3-217ENST00000494268 IQCA1LA6NCM1 817 aa8.75□□□□□ -1.01
MSL3-217ENST00000494268 WTIPA6NIX2 430 aaPredicted RBP8.75□□□□□ -1.01
MSL3-217ENST00000494268 TBC1D8O95759 1140 aa8.75□□□□□ -1.01
MSL3-217ENST00000494268 SNRPB2P08579 225 aaKnown RBP8.75□□□□□ -1.01
MSL3-217ENST00000494268 HOXC12P31275 282 aa8.75□□□□□ -1.01
MSL3-217ENST00000494268 RANGAP1P46060 587 aaPredicted RBP8.75□□□□□ -1.01
MSL3-217ENST00000494268 KCNJ6P48051 423 aa8.75□□□□□ -1.01
MSL3-217ENST00000494268 CCDC144BQ3MJ40 725 aa8.75□□□□□ -1.01
MSL3-217ENST00000494268 CYP2R1Q6VVX0 501 aa8.75□□□□□ -1.01
MSL3-217ENST00000494268 JAMLQ86YT9 394 aa8.75□□□□□ -1.01
MSL3-217ENST00000494268 MKL1Q969V6 931 aa8.75□□□□□ -1.01
MSL3-217ENST00000494268 ASIC4Q96FT7 647 aa8.75□□□□□ -1.01
MSL3-217ENST00000494268 SGSM3Q96HU1 749 aa8.75□□□□□ -1.01
MSL3-217ENST00000494268 DNAJC7Q99615 494 aa8.75□□□□□ -1.01
MSL3-217ENST00000494268 SPATA9Q9BWV2 254 aa8.75□□□□□ -1.01
MSL3-217ENST00000494268 USP35Q9P2H5 1018 aa8.75□□□□□ -1.01
MSL3-217ENST00000494268 NPHP3-ACAD11A0A0J9YXS1 232 aa8.74□□□□□ -1.01
MSL3-217ENST00000494268 PAMP19021 973 aa8.74□□□□□ -1.01
MSL3-217ENST00000494268 GFRA1P56159 465 aa8.74□□□□□ -1.01
MSL3-217ENST00000494268 SSRP1Q08945 709 aaKnown RBP8.74□□□□□ -1.01
MSL3-217ENST00000494268 LAPTM5Q13571 262 aa8.74□□□□□ -1.01
MSL3-217ENST00000494268 HSP90AA2PQ14568 343 aaPredicted RBP8.74□□□□□ -1.01
MSL3-217ENST00000494268 BMS1Q14692 1282 aaKnown RBP8.74□□□□□ -1.01
MSL3-217ENST00000494268 YOD1Q5VVQ6 348 aaPredicted RBP8.74□□□□□ -1.01
MSL3-217ENST00000494268 DENND5AQ6IQ26 1287 aa8.74□□□□□ -1.01
MSL3-217ENST00000494268 GALNT18Q6P9A2 607 aa8.74□□□□□ -1.01
MSL3-217ENST00000494268 KSR1Q8IVT5 923 aa8.74□□□□□ -1.01
MSL3-217ENST00000494268 TMEM145Q8NBT3 493 aa8.74□□□□□ -1.01
MSL3-217ENST00000494268 KREMEN2Q8NCW0 462 aa8.74□□□□□ -1.01
MSL3-217ENST00000494268 IER2Q9BTL4 223 aa8.74□□□□□ -1.01
MSL3-217ENST00000494268 ZSWIM4Q9H7M6 989 aa8.74□□□□□ -1.01
MSL3-217ENST00000494268 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.74□□□□□ -1.01
MSL3-217ENST00000494268 IMPACTQ9P2X3 320 aa8.74□□□□□ -1.01
MSL3-217ENST00000494268 TMEFF2Q9UIK5 374 aaPredicted RBP8.74□□□□□ -1.01
MSL3-217ENST00000494268 CDK11AQ9UQ88 783 aaPredicted RBP8.74□□□□□ -1.01
MSL3-217ENST00000494268 PPP1R11O60927 126 aaPredicted RBP8.73□□□□□ -1.01
MSL3-217ENST00000494268 SCG5P05408 212 aa8.73□□□□□ -1.01
MSL3-217ENST00000494268 MSL3P1P0C860 447 aa8.73□□□□□ -1.01
MSL3-217ENST00000494268 PRKCAP17252 672 aa8.73□□□□□ -1.01
MSL3-217ENST00000494268 SDHBP21912 280 aa8.73□□□□□ -1.01
MSL3-217ENST00000494268 MVKQ03426 396 aa8.73□□□□□ -1.01
MSL3-217ENST00000494268 SNX17Q15036 470 aa8.73□□□□□ -1.01
MSL3-217ENST00000494268 MBLAC2Q68D91 279 aa8.73□□□□□ -1.01
MSL3-217ENST00000494268 DPH6Q7L8W6 267 aa8.73□□□□□ -1.01
MSL3-217ENST00000494268 LRP10Q7Z4F1 713 aa8.73□□□□□ -1.01
MSL3-217ENST00000494268 NPLOC4Q8TAT6 608 aa8.73□□□□□ -1.01
MSL3-217ENST00000494268 ZNF669Q96BR6 464 aaPredicted RBP8.73□□□□□ -1.01
MSL3-217ENST00000494268 YBX2Q9Y2T7 364 aaKnown RBP8.73□□□□□ -1.01
MSL3-217ENST00000494268 TAF6LQ9Y6J9 622 aa8.73□□□□□ -1.01
MSL3-217ENST00000494268 KDM2BQ8NHM5 1336 aa8.73□□□□□ -1.01
MSL3-217ENST00000494268 PRODHO43272 600 aa8.72□□□□□ -1.01
MSL3-217ENST00000494268 ADCY3O60266 1144 aa8.72□□□□□ -1.01
MSL3-217ENST00000494268 L1CAMP32004 1257 aa8.72□□□□□ -1.01
MSL3-217ENST00000494268 IFRD2Q12894 506 aaPredicted RBP8.72□□□□□ -1.01
MSL3-217ENST00000494268 INF2Q27J81 1249 aa8.72□□□□□ -1.01
MSL3-217ENST00000494268 LRRC47Q8N1G4 583 aaKnown RBP8.72□□□□□ -1.01
MSL3-217ENST00000494268 NUP43Q8NFH3 380 aa8.72□□□□□ -1.01
MSL3-217ENST00000494268 CCDC140Q96MF4 163 aa8.72□□□□□ -1.01
MSL3-217ENST00000494268 AARSD1Q9BTE6 412 aaKnown RBP8.72□□□□□ -1.01
MSL3-217ENST00000494268 KCNK12Q9HB15 430 aa8.72□□□□□ -1.01
MSL3-217ENST00000494268 CWC22Q9HCG8 908 aaKnown RBP8.72□□□□□ -1.01
MSL3-217ENST00000494268 ACSL6Q9UKU0 697 aa8.72□□□□□ -1.01
MSL3-217ENST00000494268 DLX3O60479 287 aa8.71□□□□□ -1.02
MSL3-217ENST00000494268 FAM153BP0C7A2 387 aa8.71□□□□□ -1.02
MSL3-217ENST00000494268 FOXB2Q5VYV0 432 aa8.71□□□□□ -1.02
MSL3-217ENST00000494268 MPZL3Q6UWV2 235 aa8.71□□□□□ -1.02
MSL3-217ENST00000494268 CCDC103Q8IW40 242 aa8.71□□□□□ -1.02
MSL3-217ENST00000494268 OSBP2Q969R2 916 aa8.71□□□□□ -1.02
MSL3-217ENST00000494268 C1orf159Q96HA4 380 aa8.71□□□□□ -1.02
MSL3-217ENST00000494268 PIF1Q9H611 641 aa8.71□□□□□ -1.02
MSL3-217ENST00000494268 TRAV20A0A0B4J274 112 aa8.7□□□□□ -1.02
MSL3-217ENST00000494268 A0A1W2PQ27 194 aa8.7□□□□□ -1.02
MSL3-217ENST00000494268 A0A1W2PQ64 194 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms