RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 CYP2J2P51589 502 aa21.01■□□□□ 0.95
COL27A1-207ENST00000494090 AOC3Q16853 763 aa21.01■□□□□ 0.95
COL27A1-207ENST00000494090 C11orf57Q6ZUT1 292 aaPredicted RBP21.01■□□□□ 0.95
COL27A1-207ENST00000494090 RDH13Q8NBN7 331 aa21.01■□□□□ 0.95
COL27A1-207ENST00000494090 LINC00301Q8NCQ3 95 aa21.01■□□□□ 0.95
COL27A1-207ENST00000494090 HAUS1Q96CS2 278 aa21.01■□□□□ 0.95
COL27A1-207ENST00000494090 SLC39A2Q9NP94 309 aa21.01■□□□□ 0.95
COL27A1-207ENST00000494090 CDC23Q9UJX2 597 aa21.01■□□□□ 0.95
COL27A1-207ENST00000494090 ABCA8O94911 1581 aa21.01■□□□□ 0.95
COL27A1-207ENST00000494090 ALAS1P13196 640 aa21.01■□□□□ 0.95
COL27A1-207ENST00000494090 KIF23Q02241 960 aaPredicted RBP21.01■□□□□ 0.95
COL27A1-207ENST00000494090 KMT5BQ4FZB7 885 aa21.01■□□□□ 0.95
COL27A1-207ENST00000494090 FAM102BQ5T8I3 360 aa21.01■□□□□ 0.95
COL27A1-207ENST00000494090 GRK7Q8WTQ7 553 aa21.01■□□□□ 0.95
COL27A1-207ENST00000494090 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.01■□□□□ 0.95
COL27A1-207ENST00000494090 C1orf112Q9NSG2 853 aa21.01■□□□□ 0.95
COL27A1-207ENST00000494090 CASP14P31944 242 aa21.01■□□□□ 0.95
COL27A1-207ENST00000494090 DPCR1Q3MIW9 517 aa21.01■□□□□ 0.95
COL27A1-207ENST00000494090 LMNTD2Q8IXW0 634 aa21.01■□□□□ 0.95
COL27A1-207ENST00000494090 POLR2FP61218 127 aaKnown RBP21■□□□□ 0.95
COL27A1-207ENST00000494090 GNGT1P63211 74 aa21■□□□□ 0.95
COL27A1-207ENST00000494090 POLA2Q14181 598 aa21■□□□□ 0.95
COL27A1-207ENST00000494090 BUB1O43683 1085 aa21■□□□□ 0.95
COL27A1-207ENST00000494090 FAM26FQ5R3K3 315 aa21■□□□□ 0.95
COL27A1-207ENST00000494090 FAM71BQ8TC56 605 aa21■□□□□ 0.95
COL27A1-207ENST00000494090 NRBP2Q9NSY0 501 aa21■□□□□ 0.95
COL27A1-207ENST00000494090 LEMD3Q9Y2U8 911 aa21■□□□□ 0.95
COL27A1-207ENST00000494090 ATP8B1O43520 1251 aa21■□□□□ 0.95
COL27A1-207ENST00000494090 BUB1BO60566 1050 aaPredicted RBP21■□□□□ 0.95
COL27A1-207ENST00000494090 GOLGA8HP0CJ92 632 aa21■□□□□ 0.95
COL27A1-207ENST00000494090 GKAP1Q5VSY0 366 aaPredicted RBP21■□□□□ 0.95
COL27A1-207ENST00000494090 CASC4Q6P4E1 433 aa21■□□□□ 0.95
COL27A1-207ENST00000494090 FNBP4Q8N3X1 1017 aaPredicted RBP21■□□□□ 0.95
COL27A1-207ENST00000494090 VCX3BQ9H321 246 aa21■□□□□ 0.95
COL27A1-207ENST00000494090 PALM3A6NDB9 673 aaPredicted RBP20.99■□□□□ 0.95
COL27A1-207ENST00000494090 ABCB4P21439 1286 aa20.99■□□□□ 0.95
COL27A1-207ENST00000494090 BTDP43251 543 aa20.99■□□□□ 0.95
COL27A1-207ENST00000494090 ADAM9Q13443 819 aa20.99■□□□□ 0.95
COL27A1-207ENST00000494090 XKR9Q5GH70 373 aa20.99■□□□□ 0.95
COL27A1-207ENST00000494090 ARHGEF25Q86VW2 580 aa20.99■□□□□ 0.95
COL27A1-207ENST00000494090 MCUR1Q96AQ8 359 aa20.99■□□□□ 0.95
COL27A1-207ENST00000494090 ZNF277Q9NRM2 450 aaPredicted RBP20.99■□□□□ 0.95
COL27A1-207ENST00000494090 RAB20Q9NX57 234 aa20.99■□□□□ 0.95
COL27A1-207ENST00000494090 EEF1GP26641 437 aaKnown RBP20.99■□□□□ 0.95
COL27A1-207ENST00000494090 TMOD1P28289 359 aa20.99■□□□□ 0.95
COL27A1-207ENST00000494090 ZNF131P52739 623 aa20.99■□□□□ 0.95
COL27A1-207ENST00000494090 ATP10DQ9P241 1426 aa20.99■□□□□ 0.95
COL27A1-207ENST00000494090 PCK1P35558 622 aa20.99■□□□□ 0.95
COL27A1-207ENST00000494090 ADD2P35612 726 aa20.99■□□□□ 0.95
COL27A1-207ENST00000494090 IRX5P78411 483 aaPredicted RBP20.99■□□□□ 0.95
COL27A1-207ENST00000494090 CPSF1Q10570 1443 aaKnown RBP20.99■□□□□ 0.95
COL27A1-207ENST00000494090 SPOUT1Q5T280 376 aaKnown RBP20.99■□□□□ 0.95
COL27A1-207ENST00000494090 PRPF31Q8WWY3 499 aaKnown RBP20.99■□□□□ 0.95
COL27A1-207ENST00000494090 FAM160B1Q5W0V3 765 aa20.98■□□□□ 0.95
COL27A1-207ENST00000494090 RPUSD2Q8IZ73 545 aaKnown RBP20.98■□□□□ 0.95
COL27A1-207ENST00000494090 DHTKD1Q96HY7 919 aaPredicted RBP20.98■□□□□ 0.95
COL27A1-207ENST00000494090 TUBGCP2Q9BSJ2 902 aa20.98■□□□□ 0.95
COL27A1-207ENST00000494090 PAGR1Q9BTK6 254 aa20.98■□□□□ 0.95
COL27A1-207ENST00000494090 H2AFZP0C0S5 128 aa20.98■□□□□ 0.95
COL27A1-207ENST00000494090 POLR2BP30876 1174 aaKnown RBP20.98■□□□□ 0.95
COL27A1-207ENST00000494090 H2AFVQ71UI9 128 aa20.98■□□□□ 0.95
COL27A1-207ENST00000494090 PNMA8AQ86V59 439 aaPredicted RBP20.98■□□□□ 0.95
COL27A1-207ENST00000494090 SPATS2Q86XZ4 545 aaKnown RBP20.98■□□□□ 0.95
COL27A1-207ENST00000494090 FAM178BQ8IXR5 827 aa20.98■□□□□ 0.95
COL27A1-207ENST00000494090 CNOT6LQ96LI5 555 aaKnown RBP20.98■□□□□ 0.95
COL27A1-207ENST00000494090 PLEKHA4Q9H4M7 779 aa20.98■□□□□ 0.95
COL27A1-207ENST00000494090 RIC8AQ9NPQ8 531 aa20.98■□□□□ 0.95
COL27A1-207ENST00000494090 BCS1LQ9Y276 419 aa20.98■□□□□ 0.95
COL27A1-207ENST00000494090 AFG3L2Q9Y4W6 797 aa20.98■□□□□ 0.95
COL27A1-207ENST00000494090 RNF40O75150 1001 aa20.98■□□□□ 0.95
COL27A1-207ENST00000494090 APBA1Q02410 837 aa20.98■□□□□ 0.95
COL27A1-207ENST00000494090 GPATCH4Q5T3I0 446 aaKnown RBP20.98■□□□□ 0.95
COL27A1-207ENST00000494090 AK8Q96MA6 479 aa20.98■□□□□ 0.95
COL27A1-207ENST00000494090 HESX1Q9UBX0 185 aa20.98■□□□□ 0.95
COL27A1-207ENST00000494090 BCAP29Q9UHQ4 241 aa20.98■□□□□ 0.95
COL27A1-207ENST00000494090 PCDHA4Q9UN74 947 aa20.98■□□□□ 0.95
COL27A1-207ENST00000494090 XDHP47989 1333 aa20.98■□□□□ 0.95
COL27A1-207ENST00000494090 RFX1P22670 979 aa20.98■□□□□ 0.95
COL27A1-207ENST00000494090 SLFN13Q68D06 897 aa20.98■□□□□ 0.95
COL27A1-207ENST00000494090 METTL13Q8N6R0 699 aa20.98■□□□□ 0.95
COL27A1-207ENST00000494090 PHLPP2Q6ZVD8 1323 aa20.98■□□□□ 0.95
COL27A1-207ENST00000494090 TBC1D8O95759 1140 aa20.97■□□□□ 0.95
COL27A1-207ENST00000494090 BIRC2Q13490 618 aa20.97■□□□□ 0.95
COL27A1-207ENST00000494090 CACTINQ8WUQ7 758 aaKnown RBP20.97■□□□□ 0.95
COL27A1-207ENST00000494090 RSAD2Q8WXG1 361 aa20.97■□□□□ 0.95
COL27A1-207ENST00000494090 UGGT1Q9NYU2 1555 aa20.97■□□□□ 0.95
COL27A1-207ENST00000494090 EAPPQ56P03 285 aaPredicted RBP20.97■□□□□ 0.95
COL27A1-207ENST00000494090 SULF1Q8IWU6 871 aa20.97■□□□□ 0.95
COL27A1-207ENST00000494090 LRRC47Q8N1G4 583 aaKnown RBP20.97■□□□□ 0.95
COL27A1-207ENST00000494090 DCPSQ96C86 337 aaKnown RBP20.97■□□□□ 0.95
COL27A1-207ENST00000494090 VPS37BQ9H9H4 285 aa20.97■□□□□ 0.95
COL27A1-207ENST00000494090 YEATS2Q9ULM3 1422 aa20.97■□□□□ 0.95
COL27A1-207ENST00000494090 SOS2Q07890 1332 aaPredicted RBP20.97■□□□□ 0.95
COL27A1-207ENST00000494090 PLA2G4DQ86XP0 818 aa20.97■□□□□ 0.95
COL27A1-207ENST00000494090 ANKRD35Q8N283 1001 aa20.97■□□□□ 0.95
COL27A1-207ENST00000494090 K7ENM7 598 aa20.97■□□□□ 0.95
COL27A1-207ENST00000494090 PHBP35232 272 aa20.97■□□□□ 0.95
COL27A1-207ENST00000494090 NECTIN1Q15223 517 aa20.97■□□□□ 0.95
COL27A1-207ENST00000494090 RETREG2Q8NC44 543 aa20.97■□□□□ 0.95
COL27A1-207ENST00000494090 JPH2Q9BR39 696 aaPredicted RBP20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms