RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 PNMA2Q9UL42 364 aa15.77■□□□□ 0.12
CTDSP1-212ENST00000494067 A0A1W2PQ45 241 aaPredicted RBP15.76■□□□□ 0.11
CTDSP1-212ENST00000494067 A0A1W2PQY0 241 aa15.76■□□□□ 0.11
CTDSP1-212ENST00000494067 TRIM43BA6NCK2 446 aa15.76■□□□□ 0.11
CTDSP1-212ENST00000494067 ASB14A6NK59 587 aa15.76■□□□□ 0.11
CTDSP1-212ENST00000494067 ZNF213O14771 459 aa15.76■□□□□ 0.11
CTDSP1-212ENST00000494067 SNHG28P0DPA3 235 aa15.76■□□□□ 0.11
CTDSP1-212ENST00000494067 NT5C2P49902 561 aa15.76■□□□□ 0.11
CTDSP1-212ENST00000494067 TTC22Q5TAA0 569 aa15.76■□□□□ 0.11
CTDSP1-212ENST00000494067 NOL8Q76FK4 1167 aaKnown RBP15.76■□□□□ 0.11
CTDSP1-212ENST00000494067 VTI1AQ96AJ9 217 aa15.76■□□□□ 0.11
CTDSP1-212ENST00000494067 TRIM43Q96BQ3 446 aaPredicted RBP15.76■□□□□ 0.11
CTDSP1-212ENST00000494067 TTC14Q96N46 770 aa15.76■□□□□ 0.11
CTDSP1-212ENST00000494067 PDLIM7Q9NR12 457 aa15.76■□□□□ 0.11
CTDSP1-212ENST00000494067 CCPG1Q9ULG6 757 aa15.76■□□□□ 0.11
CTDSP1-212ENST00000494067 DCDC2CA8MYV0 355 aa15.75■□□□□ 0.11
CTDSP1-212ENST00000494067 NFIBO00712 420 aa15.75■□□□□ 0.11
CTDSP1-212ENST00000494067 ICAM1P05362 532 aa15.75■□□□□ 0.11
CTDSP1-212ENST00000494067 C6orf222P0C671 652 aaPredicted RBP15.75■□□□□ 0.11
CTDSP1-212ENST00000494067 ACLYP53396 1101 aa15.75■□□□□ 0.11
CTDSP1-212ENST00000494067 ZNF543Q08ER8 600 aa15.75■□□□□ 0.11
CTDSP1-212ENST00000494067 CCDC144BQ3MJ40 725 aa15.75■□□□□ 0.11
CTDSP1-212ENST00000494067 SYDE2Q5VT97 1194 aa15.75■□□□□ 0.11
CTDSP1-212ENST00000494067 DEFB123Q8N688 67 aa15.75■□□□□ 0.11
CTDSP1-212ENST00000494067 ESR2Q92731 530 aa15.75■□□□□ 0.11
CTDSP1-212ENST00000494067 GLT1D1Q96MS3 346 aa15.75■□□□□ 0.11
CTDSP1-212ENST00000494067 CYP39A1Q9NYL5 469 aa15.75■□□□□ 0.11
CTDSP1-212ENST00000494067 TAF6LQ9Y6J9 622 aa15.75■□□□□ 0.11
CTDSP1-212ENST00000494067 LAMA2P24043 3122 aaKnown RBP15.74■□□□□ 0.11
CTDSP1-212ENST00000494067 B4E1Z4 1266 aa15.74■□□□□ 0.11
CTDSP1-212ENST00000494067 KDM4AO75164 1064 aa15.74■□□□□ 0.11
CTDSP1-212ENST00000494067 CLTBP09497 229 aa15.74■□□□□ 0.11
CTDSP1-212ENST00000494067 GOLGA8HP0CJ92 632 aa15.74■□□□□ 0.11
CTDSP1-212ENST00000494067 RAG1P15918 1043 aa15.74■□□□□ 0.11
CTDSP1-212ENST00000494067 TLE2Q04725 743 aa15.74■□□□□ 0.11
CTDSP1-212ENST00000494067 KCNA10Q16322 511 aa15.74■□□□□ 0.11
CTDSP1-212ENST00000494067 CCDC178Q5BJE1 867 aa15.74■□□□□ 0.11
CTDSP1-212ENST00000494067 CLEC4DQ8WXI8 215 aa15.74■□□□□ 0.11
CTDSP1-212ENST00000494067 BADQ92934 168 aa15.74■□□□□ 0.11
CTDSP1-212ENST00000494067 DSCC1Q9BVC3 393 aa15.74■□□□□ 0.11
CTDSP1-212ENST00000494067 MROH7Q68CQ1 1323 aa15.73■□□□□ 0.11
CTDSP1-212ENST00000494067 PQBP1O60828 265 aaKnown RBP15.73■□□□□ 0.11
CTDSP1-212ENST00000494067 TNFAIP2Q03169 654 aa15.73■□□□□ 0.11
CTDSP1-212ENST00000494067 GNASQ5JWF2 1037 aa15.73■□□□□ 0.11
CTDSP1-212ENST00000494067 NSMFQ6X4W1 530 aa15.73■□□□□ 0.11
CTDSP1-212ENST00000494067 SLC30A10Q6XR72 485 aa15.73■□□□□ 0.11
CTDSP1-212ENST00000494067 Q7L0L9 218 aa15.73■□□□□ 0.11
CTDSP1-212ENST00000494067 IQCA1Q86XH1 822 aa15.73■□□□□ 0.11
CTDSP1-212ENST00000494067 MPHOSPH6Q99547 160 aaKnown RBP15.73■□□□□ 0.11
CTDSP1-212ENST00000494067 UPF3AQ9H1J1 476 aaKnown RBP15.73■□□□□ 0.11
CTDSP1-212ENST00000494067 PDGFCQ9NRA1 345 aa15.73■□□□□ 0.11
CTDSP1-212ENST00000494067 TMEM39AQ9NV64 488 aa15.73■□□□□ 0.11
CTDSP1-212ENST00000494067 ADD3Q9UEY8 706 aaKnown RBP15.73■□□□□ 0.11
CTDSP1-212ENST00000494067 ELP1O95163 1332 aa15.72■□□□□ 0.11
CTDSP1-212ENST00000494067 ZEB2O60315 1214 aa15.72■□□□□ 0.11
CTDSP1-212ENST00000494067 CST5P28325 142 aaPredicted RBP15.72■□□□□ 0.11
CTDSP1-212ENST00000494067 GJA9P57773 515 aa15.72■□□□□ 0.11
CTDSP1-212ENST00000494067 PTH1RQ03431 593 aa15.72■□□□□ 0.11
CTDSP1-212ENST00000494067 C9orf50Q5SZB4 431 aa15.72■□□□□ 0.11
CTDSP1-212ENST00000494067 TAPT1Q6NXT6 567 aa15.72■□□□□ 0.11
CTDSP1-212ENST00000494067 ENAHQ8N8S7 591 aaPredicted RBP15.72■□□□□ 0.11
CTDSP1-212ENST00000494067 TOX2Q96NM4 488 aa15.72■□□□□ 0.11
CTDSP1-212ENST00000494067 AP5M1Q9H0R1 490 aa15.72■□□□□ 0.11
CTDSP1-212ENST00000494067 ZSWIM5Q9P217 1185 aa15.72■□□□□ 0.11
CTDSP1-212ENST00000494067 CTNNA3Q9UI47 895 aa15.72■□□□□ 0.11
CTDSP1-212ENST00000494067 COL6A3P12111 3177 aa15.71■□□□□ 0.11
CTDSP1-212ENST00000494067 TLR3O15455 904 aaKnown RBP15.71■□□□□ 0.11
CTDSP1-212ENST00000494067 ASGR1P07306 291 aa15.71■□□□□ 0.11
CTDSP1-212ENST00000494067 EPHB4P54760 987 aa15.71■□□□□ 0.11
CTDSP1-212ENST00000494067 BEX3Q00994 111 aa15.71■□□□□ 0.11
CTDSP1-212ENST00000494067 BAATQ14032 418 aaPredicted RBP15.71■□□□□ 0.11
CTDSP1-212ENST00000494067 IMMTQ16891 758 aaKnown RBP15.71■□□□□ 0.11
CTDSP1-212ENST00000494067 CYB5R4Q7L1T6 521 aa15.71■□□□□ 0.11
CTDSP1-212ENST00000494067 EEPD1Q7L9B9 569 aa15.71■□□□□ 0.11
CTDSP1-212ENST00000494067 SKAP1Q86WV1 359 aa15.71■□□□□ 0.11
CTDSP1-212ENST00000494067 DGKHQ86XP1 1220 aa15.71■□□□□ 0.11
CTDSP1-212ENST00000494067 FBXO16Q8IX29 292 aaPredicted RBP15.71■□□□□ 0.11
CTDSP1-212ENST00000494067 MORC4Q8TE76 937 aa15.71■□□□□ 0.11
CTDSP1-212ENST00000494067 UBA5Q9GZZ9 404 aa15.71■□□□□ 0.11
CTDSP1-212ENST00000494067 GNEQ9Y223 722 aaKnown RBP15.71■□□□□ 0.11
CTDSP1-212ENST00000494067 A0A0U1RQG5 324 aaPredicted RBP15.7■□□□□ 0.1
CTDSP1-212ENST00000494067 PTPDC1A2A3K4 754 aa15.7■□□□□ 0.1
CTDSP1-212ENST00000494067 B4DLN1 442 aa15.7■□□□□ 0.1
CTDSP1-212ENST00000494067 KIAA0355O15063 1070 aa15.7■□□□□ 0.1
CTDSP1-212ENST00000494067 SMPD1P17405 629 aa15.7■□□□□ 0.1
CTDSP1-212ENST00000494067 CHMLP26374 656 aa15.7■□□□□ 0.1
CTDSP1-212ENST00000494067 MRPL12P52815 198 aaKnown RBP15.7■□□□□ 0.1
CTDSP1-212ENST00000494067 FAAP100Q0VG06 881 aa15.7■□□□□ 0.1
CTDSP1-212ENST00000494067 GPATCH4Q5T3I0 446 aaKnown RBP15.7■□□□□ 0.1
CTDSP1-212ENST00000494067 IQSEC1Q6DN90 963 aa15.7■□□□□ 0.1
CTDSP1-212ENST00000494067 ANKRD33Q7Z3H0 272 aa15.7■□□□□ 0.1
CTDSP1-212ENST00000494067 PNMA1Q8ND90 353 aa15.7■□□□□ 0.1
CTDSP1-212ENST00000494067 ANKS1AQ92625 1134 aa15.7■□□□□ 0.1
CTDSP1-212ENST00000494067 TNKSO95271 1327 aa15.69■□□□□ 0.1
CTDSP1-212ENST00000494067 MYH6P13533 1939 aa15.69■□□□□ 0.1
CTDSP1-212ENST00000494067 LOC102724159A0A0B4J2E5 919 aa15.69■□□□□ 0.1
CTDSP1-212ENST00000494067 CABYRO75952 493 aa15.69■□□□□ 0.1
CTDSP1-212ENST00000494067 NKX3-2P78367 333 aa15.69■□□□□ 0.1
CTDSP1-212ENST00000494067 FPGSQ05932 587 aa15.69■□□□□ 0.1
CTDSP1-212ENST00000494067 COL9A3Q14050 684 aaPredicted RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms