RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 DALRD3Q5D0E6 543 aaKnown RBP12.07□□□□□ -0.48
CLCN6-208ENST00000494028 RBM26Q5T8P6 1007 aaKnown RBP12.07□□□□□ -0.48
CLCN6-208ENST00000494028 CIAPIN1Q6FI81 312 aa12.07□□□□□ -0.48
CLCN6-208ENST00000494028 DTHD1Q6ZMT9 781 aa12.07□□□□□ -0.48
CLCN6-208ENST00000494028 TRMT44Q8IYL2 757 aaKnown RBP12.07□□□□□ -0.48
CLCN6-208ENST00000494028 IQUBQ8NA54 791 aa12.07□□□□□ -0.48
CLCN6-208ENST00000494028 MLKLQ8NB16 471 aa12.07□□□□□ -0.48
CLCN6-208ENST00000494028 LRRC15Q8TF66 581 aa12.07□□□□□ -0.48
CLCN6-208ENST00000494028 NUP88Q99567 741 aaPredicted RBP12.07□□□□□ -0.48
CLCN6-208ENST00000494028 XPO4Q9C0E2 1151 aaKnown RBP12.07□□□□□ -0.48
CLCN6-208ENST00000494028 CCSER1Q9C0I3 900 aa12.07□□□□□ -0.48
CLCN6-208ENST00000494028 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.07□□□□□ -0.48
CLCN6-208ENST00000494028 NRBP1Q9UHY1 535 aa12.07□□□□□ -0.48
CLCN6-208ENST00000494028 A0A1W2PRG0 241 aa12.06□□□□□ -0.48
CLCN6-208ENST00000494028 SHTN1A0MZ66 631 aa12.06□□□□□ -0.48
CLCN6-208ENST00000494028 MYO1BO43795 1136 aa12.06□□□□□ -0.48
CLCN6-208ENST00000494028 CCNT1O60563 726 aaKnown RBP12.06□□□□□ -0.48
CLCN6-208ENST00000494028 ATP1A3P13637 1013 aa12.06□□□□□ -0.48
CLCN6-208ENST00000494028 TNNI2P48788 182 aa12.06□□□□□ -0.48
CLCN6-208ENST00000494028 FANCCQ00597 558 aa12.06□□□□□ -0.48
CLCN6-208ENST00000494028 RASSF7Q02833 373 aa12.06□□□□□ -0.48
CLCN6-208ENST00000494028 SYDE2Q5VT97 1194 aa12.06□□□□□ -0.48
CLCN6-208ENST00000494028 CCDC186Q7Z3E2 898 aa12.06□□□□□ -0.48
CLCN6-208ENST00000494028 FAM83AQ86UY5 434 aa12.06□□□□□ -0.48
CLCN6-208ENST00000494028 DRC7Q8IY82 874 aa12.06□□□□□ -0.48
CLCN6-208ENST00000494028 CUL5Q93034 780 aa12.06□□□□□ -0.48
CLCN6-208ENST00000494028 MED15Q96RN5 788 aa12.06□□□□□ -0.48
CLCN6-208ENST00000494028 VEZTQ9HBM0 779 aa12.06□□□□□ -0.48
CLCN6-208ENST00000494028 IFNKQ9P0W0 207 aa12.06□□□□□ -0.48
CLCN6-208ENST00000494028 PGAP2Q9UHJ9 254 aa12.06□□□□□ -0.48
CLCN6-208ENST00000494028 OTOFQ9HC10 1997 aa12.05□□□□□ -0.48
CLCN6-208ENST00000494028 SMCHD1A6NHR9 2005 aa12.05□□□□□ -0.48
CLCN6-208ENST00000494028 F5H6K3 240 aa12.05□□□□□ -0.48
CLCN6-208ENST00000494028 CD44P16070 742 aaKnown RBP12.05□□□□□ -0.48
CLCN6-208ENST00000494028 ZNF18P17022 549 aa12.05□□□□□ -0.48
CLCN6-208ENST00000494028 KLRC3Q07444 240 aa12.05□□□□□ -0.48
CLCN6-208ENST00000494028 LRMPQ12912 555 aa12.05□□□□□ -0.48
CLCN6-208ENST00000494028 CUL4BQ13620 913 aa12.05□□□□□ -0.48
CLCN6-208ENST00000494028 BTNL9Q6UXG8 535 aa12.05□□□□□ -0.48
CLCN6-208ENST00000494028 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.05□□□□□ -0.48
CLCN6-208ENST00000494028 C17orf53Q8N3J3 647 aaPredicted RBP12.05□□□□□ -0.48
CLCN6-208ENST00000494028 OGFOD1Q8N543 542 aa12.05□□□□□ -0.48
CLCN6-208ENST00000494028 NLGN2Q8NFZ4 835 aa12.05□□□□□ -0.48
CLCN6-208ENST00000494028 DPF2Q92785 391 aa12.05□□□□□ -0.48
CLCN6-208ENST00000494028 AK8Q96MA6 479 aa12.05□□□□□ -0.48
CLCN6-208ENST00000494028 GSDMAQ96QA5 445 aa12.05□□□□□ -0.48
CLCN6-208ENST00000494028 TMEM39BQ9GZU3 492 aa12.05□□□□□ -0.48
CLCN6-208ENST00000494028 MAGEF1Q9HAY2 307 aa12.05□□□□□ -0.48
CLCN6-208ENST00000494028 ARHGEF10LQ9HCE6 1279 aa12.05□□□□□ -0.48
CLCN6-208ENST00000494028 SPTLC3Q9NUV7 552 aa12.05□□□□□ -0.48
CLCN6-208ENST00000494028 SBF1O95248 1867 aa12.05□□□□□ -0.48
CLCN6-208ENST00000494028 RAD21O60216 631 aa12.04□□□□□ -0.48
CLCN6-208ENST00000494028 OFD1O75665 1012 aa12.04□□□□□ -0.48
CLCN6-208ENST00000494028 BMP3P12645 472 aa12.04□□□□□ -0.48
CLCN6-208ENST00000494028 TAL1P17542 331 aaPredicted RBP12.04□□□□□ -0.48
CLCN6-208ENST00000494028 PLCG1P19174 1290 aa12.04□□□□□ -0.48
CLCN6-208ENST00000494028 ERCC5P28715 1186 aaPredicted RBP12.04□□□□□ -0.48
CLCN6-208ENST00000494028 CDC25AP30304 524 aa12.04□□□□□ -0.48
CLCN6-208ENST00000494028 FXR2P51116 673 aaKnown RBP eCLIP12.04□□□□□ -0.48
CLCN6-208ENST00000494028 ZNF280AP59817 542 aaPredicted RBP12.04□□□□□ -0.48
CLCN6-208ENST00000494028 CALCRLQ16602 461 aa12.04□□□□□ -0.48
CLCN6-208ENST00000494028 CABP7Q86V35 215 aa12.04□□□□□ -0.48
CLCN6-208ENST00000494028 IGSF22Q8N9C0 903 aa12.04□□□□□ -0.48
CLCN6-208ENST00000494028 ENOX1Q8TC92 643 aaKnown RBP12.04□□□□□ -0.48
CLCN6-208ENST00000494028 KIAA1524Q8TCG1 905 aa12.04□□□□□ -0.48
CLCN6-208ENST00000494028 CACTINQ8WUQ7 758 aaKnown RBP12.04□□□□□ -0.48
CLCN6-208ENST00000494028 STAMQ92783 540 aa12.04□□□□□ -0.48
CLCN6-208ENST00000494028 MTMR9Q96QG7 549 aa12.04□□□□□ -0.48
CLCN6-208ENST00000494028 MMTAG2Q9BU76 263 aaKnown RBP12.04□□□□□ -0.48
CLCN6-208ENST00000494028 ANO3Q9BYT9 981 aa12.04□□□□□ -0.48
CLCN6-208ENST00000494028 BLZF1Q9H2G9 400 aa12.04□□□□□ -0.48
CLCN6-208ENST00000494028 MYOZ2Q9NPC6 264 aa12.04□□□□□ -0.48
CLCN6-208ENST00000494028 INTS13Q9NVM9 706 aa12.04□□□□□ -0.48
CLCN6-208ENST00000494028 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.04□□□□□ -0.48
CLCN6-208ENST00000494028 NFE2L3Q9Y4A8 694 aa12.04□□□□□ -0.48
CLCN6-208ENST00000494028 WNT10BO00744 389 aa12.03□□□□□ -0.48
CLCN6-208ENST00000494028 TBC1D12O60347 775 aa12.03□□□□□ -0.48
CLCN6-208ENST00000494028 GCFC2P16383 781 aaKnown RBP12.03□□□□□ -0.48
CLCN6-208ENST00000494028 ECE1P42892 770 aa12.03□□□□□ -0.48
CLCN6-208ENST00000494028 MMP14P50281 582 aa12.03□□□□□ -0.48
CLCN6-208ENST00000494028 PRELPP51888 382 aa12.03□□□□□ -0.48
CLCN6-208ENST00000494028 CCZ1BP86790 482 aa12.03□□□□□ -0.48
CLCN6-208ENST00000494028 CCZ1P86791 482 aaPredicted RBP12.03□□□□□ -0.48
CLCN6-208ENST00000494028 AP3B2Q13367 1082 aa12.03□□□□□ -0.48
CLCN6-208ENST00000494028 ARID5BQ14865 1188 aa12.03□□□□□ -0.48
CLCN6-208ENST00000494028 CT47A1Q5JQC4 288 aaPredicted RBP12.03□□□□□ -0.48
CLCN6-208ENST00000494028 KIAA1755Q5JYT7 1200 aa12.03□□□□□ -0.48
CLCN6-208ENST00000494028 RRAGBQ5VZM2 374 aa12.03□□□□□ -0.48
CLCN6-208ENST00000494028 TMC6Q7Z403 805 aa12.03□□□□□ -0.48
CLCN6-208ENST00000494028 SMYD4Q8IYR2 804 aaPredicted RBP12.03□□□□□ -0.48
CLCN6-208ENST00000494028 ACER1Q8TDN7 264 aa12.03□□□□□ -0.48
CLCN6-208ENST00000494028 FHDC1Q9C0D6 1143 aaPredicted RBP12.03□□□□□ -0.48
CLCN6-208ENST00000494028 GLT8D2Q9H1C3 349 aa12.03□□□□□ -0.48
CLCN6-208ENST00000494028 CUEDC2Q9H467 287 aa12.03□□□□□ -0.48
CLCN6-208ENST00000494028 FANCLQ9NW38 375 aa12.03□□□□□ -0.48
CLCN6-208ENST00000494028 IMPACTQ9P2X3 320 aa12.03□□□□□ -0.48
CLCN6-208ENST00000494028 TMX2Q9Y320 296 aa12.03□□□□□ -0.48
CLCN6-208ENST00000494028 CD2APQ9Y5K6 639 aa12.03□□□□□ -0.48
CLCN6-208ENST00000494028 SRCAPQ6ZRS2 3230 aa12.03□□□□□ -0.48
CLCN6-208ENST00000494028 PPP1R3GB7ZBB8 358 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms