RNA–Protein interactions for RNA: ENST00000494016.1

CPSF7-213, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-213ENST00000494016 USP48Q86UV5 1035 aa7.1□□□□□ -1.27
CPSF7-213ENST00000494016 TTC16Q8NEE8 873 aa7.1□□□□□ -1.27
CPSF7-213ENST00000494016 SYT17Q9BSW7 474 aa7.1□□□□□ -1.27
CPSF7-213ENST00000494016 ABI2Q9NYB9 513 aaPredicted RBP7.1□□□□□ -1.27
CPSF7-213ENST00000494016 TMEM63CQ9P1W3 806 aa7.1□□□□□ -1.27
CPSF7-213ENST00000494016 MTMR6Q9Y217 621 aa7.1□□□□□ -1.27
CPSF7-213ENST00000494016 MYH7P12883 1935 aa7.09□□□□□ -1.27
CPSF7-213ENST00000494016 MROH5Q6ZUA9 1318 aa7.09□□□□□ -1.27
CPSF7-213ENST00000494016 FAM177BA6PVY3 158 aa7.09□□□□□ -1.27
CPSF7-213ENST00000494016 SNAP23O00161 211 aa7.09□□□□□ -1.27
CPSF7-213ENST00000494016 NDUFB5O43674 189 aa7.09□□□□□ -1.27
CPSF7-213ENST00000494016 GADD45BO75293 160 aaPredicted RBP7.09□□□□□ -1.27
CPSF7-213ENST00000494016 ZFYP08048 801 aaPredicted RBP7.09□□□□□ -1.27
CPSF7-213ENST00000494016 NCLP19338 710 aaKnown RBP7.09□□□□□ -1.27
CPSF7-213ENST00000494016 DGKGP49619 791 aa7.09□□□□□ -1.27
CPSF7-213ENST00000494016 ZNF445P59923 1031 aa7.09□□□□□ -1.27
CPSF7-213ENST00000494016 SNRPNP63162 240 aaKnown RBP7.09□□□□□ -1.27
CPSF7-213ENST00000494016 CLEC4GQ6UXB4 293 aa7.09□□□□□ -1.27
CPSF7-213ENST00000494016 C20orf204Q6ZNR8 217 aa7.09□□□□□ -1.27
CPSF7-213ENST00000494016 SMIM5Q71RC9 77 aa7.09□□□□□ -1.27
CPSF7-213ENST00000494016 TMEM87AQ8NBN3 555 aa7.09□□□□□ -1.27
CPSF7-213ENST00000494016 LPIN2Q92539 896 aa7.09□□□□□ -1.27
CPSF7-213ENST00000494016 CITED4Q96RK1 184 aa7.09□□□□□ -1.27
CPSF7-213ENST00000494016 AGXT2Q9BYV1 514 aa7.09□□□□□ -1.27
CPSF7-213ENST00000494016 PUS7LQ9H0K6 701 aaKnown RBP7.09□□□□□ -1.27
CPSF7-213ENST00000494016 GRPEL1Q9HAV7 217 aa7.09□□□□□ -1.27
CPSF7-213ENST00000494016 RRAGCQ9HB90 399 aa7.09□□□□□ -1.27
CPSF7-213ENST00000494016 PIH1D3Q9NQM4 214 aaKnown RBP7.09□□□□□ -1.27
CPSF7-213ENST00000494016 NAGPAQ9UK23 515 aa7.09□□□□□ -1.27
CPSF7-213ENST00000494016 ISY1Q9ULR0 285 aaKnown RBP7.09□□□□□ -1.27
CPSF7-213ENST00000494016 NIP7Q9Y221 180 aaKnown RBP eCLIP7.09□□□□□ -1.27
CPSF7-213ENST00000494016 RTL9Q8NET4 1388 aa7.08□□□□□ -1.28
CPSF7-213ENST00000494016 ARAP2Q8WZ64 1704 aa7.08□□□□□ -1.28
CPSF7-213ENST00000494016 TCRBV5S4A2TA0A5A2 114 aa7.08□□□□□ -1.28
CPSF7-213ENST00000494016 E7EWF7 191 aa7.08□□□□□ -1.28
CPSF7-213ENST00000494016 RPS6KA4O75676 772 aa7.08□□□□□ -1.28
CPSF7-213ENST00000494016 F13A1P00488 732 aa7.08□□□□□ -1.28
CPSF7-213ENST00000494016 FGAP02671 866 aa7.08□□□□□ -1.28
CPSF7-213ENST00000494016 ALBP02768 609 aa7.08□□□□□ -1.28
CPSF7-213ENST00000494016 ADD2P35612 726 aa7.08□□□□□ -1.28
CPSF7-213ENST00000494016 PHKA1P46020 1223 aa7.08□□□□□ -1.28
CPSF7-213ENST00000494016 MLLT1Q03111 559 aaPredicted RBP7.08□□□□□ -1.28
CPSF7-213ENST00000494016 SF3B3Q15393 1217 aaKnown RBP7.08□□□□□ -1.28
CPSF7-213ENST00000494016 PLA2G4EQ3MJ16 856 aa7.08□□□□□ -1.28
CPSF7-213ENST00000494016 ZSCAN23Q3MJ62 389 aa7.08□□□□□ -1.28
CPSF7-213ENST00000494016 SLC10A5Q5PT55 438 aa7.08□□□□□ -1.28
CPSF7-213ENST00000494016 LARP1BQ659C4 914 aaKnown RBP7.08□□□□□ -1.28
CPSF7-213ENST00000494016 LINC00114Q6XXX2 140 aa7.08□□□□□ -1.28
CPSF7-213ENST00000494016 MICALL1Q8N3F8 863 aa7.08□□□□□ -1.28
CPSF7-213ENST00000494016 APPBP2Q92624 585 aa7.08□□□□□ -1.28
CPSF7-213ENST00000494016 PANK2Q9BZ23 570 aa7.08□□□□□ -1.28
CPSF7-213ENST00000494016 PRDM6Q9NQX0 595 aa7.08□□□□□ -1.28
CPSF7-213ENST00000494016 BIN2Q9UBW5 565 aaPredicted RBP7.08□□□□□ -1.28
CPSF7-213ENST00000494016 CNPY2Q9Y2B0 182 aa7.08□□□□□ -1.28
CPSF7-213ENST00000494016 LAMB2P55268 1798 aa7.08□□□□□ -1.28
CPSF7-213ENST00000494016 BCORQ6W2J9 1755 aa7.08□□□□□ -1.28
CPSF7-213ENST00000494016 CNTNAP5Q8WYK1 1306 aa7.07□□□□□ -1.28
CPSF7-213ENST00000494016 CNTNAP4Q9C0A0 1308 aa7.07□□□□□ -1.28
CPSF7-213ENST00000494016 TAF1P21675 1872 aa7.07□□□□□ -1.28
CPSF7-213ENST00000494016 UBR3Q6ZT12 1888 aa7.07□□□□□ -1.28
CPSF7-213ENST00000494016 COL4A1P02462 1669 aa7.07□□□□□ -1.28
CPSF7-213ENST00000494016 M0R082 166 aa7.07□□□□□ -1.28
CPSF7-213ENST00000494016 PFKFB2O60825 505 aa7.07□□□□□ -1.28
CPSF7-213ENST00000494016 UQCRFS1P1P0C7P4 283 aa7.07□□□□□ -1.28
CPSF7-213ENST00000494016 STK3Q13188 491 aa7.07□□□□□ -1.28
CPSF7-213ENST00000494016 PUM3Q15397 648 aaKnown RBP7.07□□□□□ -1.28
CPSF7-213ENST00000494016 GPR162Q16538 588 aa7.07□□□□□ -1.28
CPSF7-213ENST00000494016 LRRFIP1Q32MZ4 808 aaKnown RBP7.07□□□□□ -1.28
CPSF7-213ENST00000494016 FOXD4L6Q3SYB3 417 aaPredicted RBP7.07□□□□□ -1.28
CPSF7-213ENST00000494016 CCDC152Q4G0S7 254 aa7.07□□□□□ -1.28
CPSF7-213ENST00000494016 CAVIN1Q6NZI2 390 aaKnown RBP7.07□□□□□ -1.28
CPSF7-213ENST00000494016 FOXD4L3Q6VB84 417 aaPredicted RBP7.07□□□□□ -1.28
CPSF7-213ENST00000494016 PODNQ7Z5L7 613 aa7.07□□□□□ -1.28
CPSF7-213ENST00000494016 FAM35AQ86V20 835 aa7.07□□□□□ -1.28
CPSF7-213ENST00000494016 KRTAP1-3Q8IUG1 177 aa7.07□□□□□ -1.28
CPSF7-213ENST00000494016 FBXL16Q8N461 479 aa7.07□□□□□ -1.28
CPSF7-213ENST00000494016 BEND7Q8N7W2 519 aaPredicted RBP7.07□□□□□ -1.28
CPSF7-213ENST00000494016 SMARCC2Q8TAQ2 1214 aa7.07□□□□□ -1.28
CPSF7-213ENST00000494016 ZNF417Q8TAU3 575 aa7.07□□□□□ -1.28
CPSF7-213ENST00000494016 GTF3C6Q969F1 213 aa7.07□□□□□ -1.28
CPSF7-213ENST00000494016 ZNF587Q96SQ5 575 aaPredicted RBP7.07□□□□□ -1.28
CPSF7-213ENST00000494016 FAM129BQ96TA1 746 aa7.07□□□□□ -1.28
CPSF7-213ENST00000494016 SPOCK3Q9BQ16 436 aa7.07□□□□□ -1.28
CPSF7-213ENST00000494016 RBCK1Q9BYM8 510 aa7.07□□□□□ -1.28
CPSF7-213ENST00000494016 LRRC2Q9BYS8 371 aa7.07□□□□□ -1.28
CPSF7-213ENST00000494016 STK32BQ9NY57 414 aa7.07□□□□□ -1.28
CPSF7-213ENST00000494016 CNTN3Q9P232 1028 aa7.07□□□□□ -1.28
CPSF7-213ENST00000494016 CTNNA3Q9UI47 895 aa7.07□□□□□ -1.28
CPSF7-213ENST00000494016 MKL2Q9ULH7 1088 aa7.07□□□□□ -1.28
CPSF7-213ENST00000494016 C4BP0C0L5 1744 aa7.07□□□□□ -1.28
CPSF7-213ENST00000494016 GOLGB1Q14789 3259 aaKnown RBP7.06□□□□□ -1.28
CPSF7-213ENST00000494016 WTIPA6NIX2 430 aaPredicted RBP7.06□□□□□ -1.28
CPSF7-213ENST00000494016 JAK2O60674 1132 aa7.06□□□□□ -1.28
CPSF7-213ENST00000494016 TNFRSF21O75509 655 aa7.06□□□□□ -1.28
CPSF7-213ENST00000494016 CTDNEP1O95476 244 aa7.06□□□□□ -1.28
CPSF7-213ENST00000494016 MBD3O95983 291 aa7.06□□□□□ -1.28
CPSF7-213ENST00000494016 SLC5A1P13866 664 aa7.06□□□□□ -1.28
CPSF7-213ENST00000494016 CPB1P15086 417 aa7.06□□□□□ -1.28
CPSF7-213ENST00000494016 EVCP57679 992 aa7.06□□□□□ -1.28
CPSF7-213ENST00000494016 APOBRQ0VD83 1088 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms