RNA–Protein interactions for RNA: ENST00000493594.6

GBP3-208, Transcript of guanylate binding protein 3, humanhuman

TSL 1 (best)

Gene GBP3, Length 2,561 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBP3-208ENST00000493594 ZNF662Q6ZS27 426 aa9.29□□□□□ -0.92
GBP3-208ENST00000493594 SPATS2Q86XZ4 545 aaKnown RBP9.29□□□□□ -0.92
GBP3-208ENST00000493594 C2CD5Q86YS7 1000 aa9.29□□□□□ -0.92
GBP3-208ENST00000493594 CCDC170Q8IYT3 715 aa9.29□□□□□ -0.92
GBP3-208ENST00000493594 IQCKQ8N0W5 287 aa9.29□□□□□ -0.92
GBP3-208ENST00000493594 CSGALNACT2Q8N6G5 542 aa9.29□□□□□ -0.92
GBP3-208ENST00000493594 RNF26Q9BY78 433 aaPredicted RBP9.29□□□□□ -0.92
GBP3-208ENST00000493594 TTYH3Q9C0H2 523 aa9.29□□□□□ -0.92
GBP3-208ENST00000493594 A1CFQ9NQ94 594 aaKnown RBP9.29□□□□□ -0.92
GBP3-208ENST00000493594 MCM8Q9UJA3 840 aa9.29□□□□□ -0.92
GBP3-208ENST00000493594 SALL4Q9UJQ4 1053 aa9.29□□□□□ -0.92
GBP3-208ENST00000493594 RIPOR2Q9Y4F9 1068 aa9.29□□□□□ -0.92
GBP3-208ENST00000493594 TMEM94Q12767 1356 aa9.29□□□□□ -0.92
GBP3-208ENST00000493594 MYH13Q9UKX3 1938 aa9.28□□□□□ -0.92
GBP3-208ENST00000493594 PP2D1A8MPX8 630 aa9.28□□□□□ -0.92
GBP3-208ENST00000493594 RASSF9O75901 435 aa9.28□□□□□ -0.92
GBP3-208ENST00000493594 ITGA6P23229 1130 aa9.28□□□□□ -0.92
GBP3-208ENST00000493594 MTIF2P46199 727 aaKnown RBP9.28□□□□□ -0.92
GBP3-208ENST00000493594 SPRED3Q2MJR0 410 aa9.28□□□□□ -0.92
GBP3-208ENST00000493594 MAATS1Q7Z4T9 603 aa9.28□□□□□ -0.92
GBP3-208ENST00000493594 RPAINQ86UA6 219 aa9.28□□□□□ -0.92
GBP3-208ENST00000493594 IQCA1Q86XH1 822 aa9.28□□□□□ -0.92
GBP3-208ENST00000493594 LCORLQ8N3X6 602 aa9.28□□□□□ -0.92
GBP3-208ENST00000493594 TTLL11Q8NHH1 800 aa9.28□□□□□ -0.92
GBP3-208ENST00000493594 CAVIN3Q969G5 261 aa9.28□□□□□ -0.92
GBP3-208ENST00000493594 GREM2Q9H772 168 aa9.28□□□□□ -0.92
GBP3-208ENST00000493594 SH2D4AQ9H788 454 aa9.28□□□□□ -0.92
GBP3-208ENST00000493594 VEZTQ9HBM0 779 aa9.28□□□□□ -0.92
GBP3-208ENST00000493594 TNKSO95271 1327 aa9.28□□□□□ -0.92
GBP3-208ENST00000493594 SPATA31A3Q5VYP0 1347 aa9.28□□□□□ -0.92
GBP3-208ENST00000493594 AKR1B10O60218 316 aa9.28□□□□□ -0.92
GBP3-208ENST00000493594 HEXIM1O94992 359 aaKnown RBP9.28□□□□□ -0.92
GBP3-208ENST00000493594 VEGFAP15692 232 aaPredicted RBP9.28□□□□□ -0.92
GBP3-208ENST00000493594 ALX1Q15699 326 aa9.28□□□□□ -0.92
GBP3-208ENST00000493594 PREPLQ4J6C6 727 aaPredicted RBP9.28□□□□□ -0.92
GBP3-208ENST00000493594 IFT20Q8IY31 132 aa9.28□□□□□ -0.92
GBP3-208ENST00000493594 THEMISQ8N1K5 641 aaPredicted RBP9.28□□□□□ -0.92
GBP3-208ENST00000493594 TMTC2Q8N394 836 aa9.28□□□□□ -0.92
GBP3-208ENST00000493594 PIK3R5Q8WYR1 880 aa9.28□□□□□ -0.92
GBP3-208ENST00000493594 MIEF2Q96C03 454 aa9.28□□□□□ -0.92
GBP3-208ENST00000493594 NOC4LQ9BVI4 516 aaKnown RBP9.28□□□□□ -0.92
GBP3-208ENST00000493594 FAM207AQ9NSI2 230 aaPredicted RBP9.28□□□□□ -0.92
GBP3-208ENST00000493594 ARHGAP20Q9P2F6 1191 aa9.28□□□□□ -0.92
GBP3-208ENST00000493594 HYOU1Q9Y4L1 999 aa9.28□□□□□ -0.92
GBP3-208ENST00000493594 BCL9LQ86UU0 1499 aa9.27□□□□□ -0.92
GBP3-208ENST00000493594 ARHGAP23Q9P227 1491 aa9.27□□□□□ -0.92
GBP3-208ENST00000493594 GOLGA6L7A0A1B0GV03 622 aa9.27□□□□□ -0.92
GBP3-208ENST00000493594 PSMA7O14818 248 aa9.27□□□□□ -0.92
GBP3-208ENST00000493594 BMP15O95972 392 aa9.27□□□□□ -0.92
GBP3-208ENST00000493594 TCP1P17987 556 aaKnown RBP9.27□□□□□ -0.92
GBP3-208ENST00000493594 EIF4A3P38919 411 aaKnown RBP9.27□□□□□ -0.92
GBP3-208ENST00000493594 CCDC121Q6ZUS5 278 aa9.27□□□□□ -0.92
GBP3-208ENST00000493594 YTHDF3Q7Z739 585 aaKnown RBP9.27□□□□□ -0.92
GBP3-208ENST00000493594 STAG1Q8WVM7 1258 aa9.27□□□□□ -0.92
GBP3-208ENST00000493594 TSGA10Q9BZW7 698 aa9.27□□□□□ -0.92
GBP3-208ENST00000493594 THAP9Q9H5L6 903 aa9.27□□□□□ -0.92
GBP3-208ENST00000493594 BCCIPQ9P287 314 aaKnown RBP eCLIP9.27□□□□□ -0.92
GBP3-208ENST00000493594 DDX20Q9UHI6 824 aaKnown RBP9.27□□□□□ -0.92
GBP3-208ENST00000493594 DNM1LO00429 736 aa9.27□□□□□ -0.93
GBP3-208ENST00000493594 EPHB6O15197 1021 aa9.27□□□□□ -0.93
GBP3-208ENST00000493594 FAM107AO95990 144 aa9.27□□□□□ -0.93
GBP3-208ENST00000493594 PCCAP05165 728 aaPredicted RBP9.27□□□□□ -0.93
GBP3-208ENST00000493594 RPSAP08865 295 aaKnown RBP9.27□□□□□ -0.93
GBP3-208ENST00000493594 PAX7P23759 505 aa9.27□□□□□ -0.93
GBP3-208ENST00000493594 TMOD1P28289 359 aa9.27□□□□□ -0.93
GBP3-208ENST00000493594 KIF11P52732 1056 aa9.27□□□□□ -0.93
GBP3-208ENST00000493594 RASSF7Q02833 373 aa9.27□□□□□ -0.93
GBP3-208ENST00000493594 SF3A3Q12874 501 aaKnown RBP eCLIP9.27□□□□□ -0.93
GBP3-208ENST00000493594 PPP2R5AQ15172 486 aa9.27□□□□□ -0.93
GBP3-208ENST00000493594 TMC4Q7Z404 712 aa9.27□□□□□ -0.93
GBP3-208ENST00000493594 PROCA1Q8NCQ7 364 aaPredicted RBP9.27□□□□□ -0.93
GBP3-208ENST00000493594 OR2W6PQ8NHA6 318 aa9.27□□□□□ -0.93
GBP3-208ENST00000493594 SDR42E1Q8WUS8 393 aa9.27□□□□□ -0.93
GBP3-208ENST00000493594 ATP6V1G3Q96LB4 118 aa9.27□□□□□ -0.93
GBP3-208ENST00000493594 CNOT6LQ96LI5 555 aaKnown RBP9.27□□□□□ -0.93
GBP3-208ENST00000493594 ALS2CR12Q96Q35 445 aa9.27□□□□□ -0.93
GBP3-208ENST00000493594 DUSP9Q99956 384 aaKnown RBP9.27□□□□□ -0.93
GBP3-208ENST00000493594 NUP58Q9BVL2 599 aa9.27□□□□□ -0.93
GBP3-208ENST00000493594 NACAP1Q9BZK3 213 aa9.27□□□□□ -0.93
GBP3-208ENST00000493594 HAUS2Q9NVX0 235 aa9.27□□□□□ -0.93
GBP3-208ENST00000493594 ATXN2Q99700 1313 aaKnown RBP9.27□□□□□ -0.93
GBP3-208ENST00000493594 SLIT3O75094 1523 aa9.26□□□□□ -0.93
GBP3-208ENST00000493594 USP54Q70EL1 1684 aa9.26□□□□□ -0.93
GBP3-208ENST00000493594 C21orf2O43822 256 aa9.26□□□□□ -0.93
GBP3-208ENST00000493594 NEBLO76041 1014 aa9.26□□□□□ -0.93
GBP3-208ENST00000493594 PRLRP16471 622 aa9.26□□□□□ -0.93
GBP3-208ENST00000493594 MAGEA1P43355 309 aa9.26□□□□□ -0.93
GBP3-208ENST00000493594 NLRP5P59047 1200 aa9.26□□□□□ -0.93
GBP3-208ENST00000493594 ITIH3Q06033 890 aa9.26□□□□□ -0.93
GBP3-208ENST00000493594 MAP3K12Q12852 859 aa9.26□□□□□ -0.93
GBP3-208ENST00000493594 NPY5RQ15761 445 aa9.26□□□□□ -0.93
GBP3-208ENST00000493594 ANKRD40Q6AI12 368 aa9.26□□□□□ -0.93
GBP3-208ENST00000493594 TTI2Q6NXR4 508 aa9.26□□□□□ -0.93
GBP3-208ENST00000493594 CYB5D1Q6P9G0 228 aa9.26□□□□□ -0.93
GBP3-208ENST00000493594 FAM228AQ86W67 206 aa9.26□□□□□ -0.93
GBP3-208ENST00000493594 PARP9Q8IXQ6 854 aa9.26□□□□□ -0.93
GBP3-208ENST00000493594 CYFIP2Q96F07 1278 aa9.26□□□□□ -0.93
GBP3-208ENST00000493594 KRT12Q99456 494 aa9.26□□□□□ -0.93
GBP3-208ENST00000493594 TLR10Q9BXR5 811 aa9.26□□□□□ -0.93
GBP3-208ENST00000493594 OSBPL7Q9BZF2 842 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms