RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 SLC12A7Q9Y666 1083 aa13.5□□□□□ -0.25
CTSA-209ENST00000493522 CYP46A1Q9Y6A2 500 aa13.5□□□□□ -0.25
CTSA-209ENST00000493522 VCANP13611 3396 aa13.49□□□□□ -0.25
CTSA-209ENST00000493522 FDX1P10109 184 aa13.49□□□□□ -0.25
CTSA-209ENST00000493522 RXRAP19793 462 aa13.49□□□□□ -0.25
CTSA-209ENST00000493522 SNAP25P60880 206 aa13.49□□□□□ -0.25
CTSA-209ENST00000493522 MAP2K5Q13163 448 aa13.49□□□□□ -0.25
CTSA-209ENST00000493522 CCL14Q16627 93 aa13.49□□□□□ -0.25
CTSA-209ENST00000493522 MFSD14CQ5VZR4 134 aa13.49□□□□□ -0.25
CTSA-209ENST00000493522 LHX8Q68G74 356 aa13.49□□□□□ -0.25
CTSA-209ENST00000493522 BTNL9Q6UXG8 535 aa13.49□□□□□ -0.25
CTSA-209ENST00000493522 SYNE3Q6ZMZ3 975 aa13.49□□□□□ -0.25
CTSA-209ENST00000493522 RUFY3Q7L099 469 aa13.49□□□□□ -0.25
CTSA-209ENST00000493522 SGMS1Q86VZ5 419 aa13.49□□□□□ -0.25
CTSA-209ENST00000493522 NCAPG2Q86XI2 1143 aa13.49□□□□□ -0.25
CTSA-209ENST00000493522 CTCFLQ8NI51 663 aaPredicted RBP13.49□□□□□ -0.25
CTSA-209ENST00000493522 TEX13BQ9BXU2 312 aa13.49□□□□□ -0.25
CTSA-209ENST00000493522 UPF2Q9HAU5 1272 aaKnown RBP13.49□□□□□ -0.25
CTSA-209ENST00000493522 SLC38A10Q9HBR0 1119 aa13.49□□□□□ -0.25
CTSA-209ENST00000493522 RAVER2Q9HCJ3 691 aaKnown RBP13.49□□□□□ -0.25
CTSA-209ENST00000493522 ZNF214Q9UL59 606 aaPredicted RBP13.49□□□□□ -0.25
CTSA-209ENST00000493522 STXBP5LQ9Y2K9 1186 aa13.49□□□□□ -0.25
CTSA-209ENST00000493522 KLF18A0A0U1RQI7 1052 aa13.48□□□□□ -0.25
CTSA-209ENST00000493522 MSCO60682 206 aa13.48□□□□□ -0.25
CTSA-209ENST00000493522 ERCC3P19447 782 aa13.48□□□□□ -0.25
CTSA-209ENST00000493522 KIF5BP33176 963 aa13.48□□□□□ -0.25
CTSA-209ENST00000493522 COPB2P35606 906 aa13.48□□□□□ -0.25
CTSA-209ENST00000493522 STAT3P40763 770 aa13.48□□□□□ -0.25
CTSA-209ENST00000493522 TROAPQ12815 778 aa13.48□□□□□ -0.25
CTSA-209ENST00000493522 LRRC26Q2I0M4 334 aa13.48□□□□□ -0.25
CTSA-209ENST00000493522 Q7L0L9 218 aa13.48□□□□□ -0.25
CTSA-209ENST00000493522 RIOX2Q8IUF8 465 aa13.48□□□□□ -0.25
CTSA-209ENST00000493522 CCDC144CPQ8IYA2 1237 aa13.48□□□□□ -0.25
CTSA-209ENST00000493522 STAG2Q8N3U4 1231 aa13.48□□□□□ -0.25
CTSA-209ENST00000493522 SHCBP1Q8NEM2 672 aa13.48□□□□□ -0.25
CTSA-209ENST00000493522 BRF1Q92994 677 aa13.48□□□□□ -0.25
CTSA-209ENST00000493522 TM6SF1Q9BZW5 370 aa13.48□□□□□ -0.25
CTSA-209ENST00000493522 UBA5Q9GZZ9 404 aa13.48□□□□□ -0.25
CTSA-209ENST00000493522 RANBP17Q9H2T7 1088 aaKnown RBP13.48□□□□□ -0.25
CTSA-209ENST00000493522 ZSWIM6Q9HCJ5 1215 aa13.48□□□□□ -0.25
CTSA-209ENST00000493522 MAD2L2Q9UI95 211 aa13.48□□□□□ -0.25
CTSA-209ENST00000493522 IVNS1ABPQ9Y6Y0 642 aa13.48□□□□□ -0.25
CTSA-209ENST00000493522 FRMPD3Q5JV73 1810 aa13.48□□□□□ -0.25
CTSA-209ENST00000493522 LRRC37A2A6NM11 1700 aa13.47□□□□□ -0.25
CTSA-209ENST00000493522 SLC15A5A6NIM6 579 aa13.47□□□□□ -0.25
CTSA-209ENST00000493522 GOLGA8BA8MQT2 603 aa13.47□□□□□ -0.25
CTSA-209ENST00000493522 KLRF2D3W0D1 207 aa13.47□□□□□ -0.25
CTSA-209ENST00000493522 SLC25A27O95847 323 aa13.47□□□□□ -0.25
CTSA-209ENST00000493522 CALM1P0DP23 149 aa13.47□□□□□ -0.25
CTSA-209ENST00000493522 CALM2P0DP24 149 aa13.47□□□□□ -0.25
CTSA-209ENST00000493522 CALM3P0DP25 149 aa13.47□□□□□ -0.25
CTSA-209ENST00000493522 OAZ1P54368 228 aa13.47□□□□□ -0.25
CTSA-209ENST00000493522 MDM2Q00987 491 aaPredicted RBP13.47□□□□□ -0.25
CTSA-209ENST00000493522 APOBRQ0VD83 1088 aa13.47□□□□□ -0.25
CTSA-209ENST00000493522 CDC37Q16543 378 aaPredicted RBP13.47□□□□□ -0.25
CTSA-209ENST00000493522 APOA5Q6Q788 366 aa13.47□□□□□ -0.25
CTSA-209ENST00000493522 MROH8Q9H579 483 aa13.47□□□□□ -0.25
CTSA-209ENST00000493522 HOMER2Q9NSB8 354 aa13.47□□□□□ -0.25
CTSA-209ENST00000493522 CCPG1Q9ULG6 757 aa13.47□□□□□ -0.25
CTSA-209ENST00000493522 EYSQ5T1H1 3165 aa13.46□□□□□ -0.25
CTSA-209ENST00000493522 PALM3A6NDB9 673 aaPredicted RBP13.46□□□□□ -0.25
CTSA-209ENST00000493522 GOLGA8AA7E2F4 631 aa13.46□□□□□ -0.25
CTSA-209ENST00000493522 ATP2A1O14983 1001 aa13.46□□□□□ -0.25
CTSA-209ENST00000493522 ZBTB43O43298 467 aa13.46□□□□□ -0.25
CTSA-209ENST00000493522 HOXC6P09630 235 aa13.46□□□□□ -0.25
CTSA-209ENST00000493522 ALAS1P13196 640 aa13.46□□□□□ -0.25
CTSA-209ENST00000493522 TAL1P17542 331 aaPredicted RBP13.46□□□□□ -0.25
CTSA-209ENST00000493522 PTPREP23469 700 aa13.46□□□□□ -0.25
CTSA-209ENST00000493522 GRB14Q14449 540 aa13.46□□□□□ -0.25
CTSA-209ENST00000493522 ADGRF4Q8IZF3 695 aa13.46□□□□□ -0.25
CTSA-209ENST00000493522 AGBL1Q96MI9 1066 aa13.46□□□□□ -0.25
CTSA-209ENST00000493522 LBHD1Q9BQE6 289 aaPredicted RBP13.46□□□□□ -0.25
CTSA-209ENST00000493522 C22orf23Q9BZE7 217 aa13.46□□□□□ -0.25
CTSA-209ENST00000493522 SENP6Q9GZR1 1112 aaPredicted RBP13.46□□□□□ -0.25
CTSA-209ENST00000493522 VAT1LQ9HCJ6 419 aa13.46□□□□□ -0.25
CTSA-209ENST00000493522 PDRG1Q9NUG6 133 aa13.46□□□□□ -0.25
CTSA-209ENST00000493522 MTMR10Q9NXD2 777 aa13.46□□□□□ -0.25
CTSA-209ENST00000493522 DDX20Q9UHI6 824 aaKnown RBP13.46□□□□□ -0.25
CTSA-209ENST00000493522 BRPF3Q9ULD4 1205 aa13.46□□□□□ -0.25
CTSA-209ENST00000493522 CDH23Q9H251 3354 aa13.46□□□□□ -0.26
CTSA-209ENST00000493522 ZNF536O15090 1300 aa13.45□□□□□ -0.26
CTSA-209ENST00000493522 ICAM1P05362 532 aa13.45□□□□□ -0.26
CTSA-209ENST00000493522 CNGA1P29973 690 aa13.45□□□□□ -0.26
CTSA-209ENST00000493522 RTN1Q16799 776 aa13.45□□□□□ -0.26
CTSA-209ENST00000493522 HOMER1Q86YM7 354 aa13.45□□□□□ -0.26
CTSA-209ENST00000493522 MAP3K14Q99558 947 aa13.45□□□□□ -0.26
CTSA-209ENST00000493522 RNF146Q9NTX7 359 aa13.45□□□□□ -0.26
CTSA-209ENST00000493522 FLRT1Q9NZU1 646 aa13.45□□□□□ -0.26
CTSA-209ENST00000493522 PRKAG2Q9UGJ0 569 aa13.45□□□□□ -0.26
CTSA-209ENST00000493522 RIPK3Q9Y572 518 aa13.45□□□□□ -0.26
CTSA-209ENST00000493522 DNM1LO00429 736 aa13.44□□□□□ -0.26
CTSA-209ENST00000493522 PLEKHA8P1O95397 391 aa13.44□□□□□ -0.26
CTSA-209ENST00000493522 GNAQP50148 359 aa13.44□□□□□ -0.26
CTSA-209ENST00000493522 METAP2P50579 478 aaKnown RBP eCLIP13.44□□□□□ -0.26
CTSA-209ENST00000493522 TOB2Q14106 344 aaPredicted RBP13.44□□□□□ -0.26
CTSA-209ENST00000493522 KCTD2Q14681 263 aa13.44□□□□□ -0.26
CTSA-209ENST00000493522 QRICH1Q2TAL8 776 aa13.44□□□□□ -0.26
CTSA-209ENST00000493522 USH1GQ495M9 461 aa13.44□□□□□ -0.26
CTSA-209ENST00000493522 PIBF1Q8WXW3 757 aa13.44□□□□□ -0.26
CTSA-209ENST00000493522 IL17RAQ96F46 866 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms