RNA–Protein interactions for RNA: ENST00000493415.5

A1CF-210, Transcript of APOBEC1 complementation factor, humanhuman

TSL 5

Gene A1CF, Length 926 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-210ENST00000493415 CHMP4BP1P59074 171 aa6.9□□□□□ -1.3
A1CF-210ENST00000493415 NHLH1Q02575 133 aa6.9□□□□□ -1.3
A1CF-210ENST00000493415 TAP1Q03518 808 aa6.9□□□□□ -1.3
A1CF-210ENST00000493415 IKQ13123 557 aaPredicted RBP6.9□□□□□ -1.3
A1CF-210ENST00000493415 EP400NLQ6ZTU2 488 aa6.9□□□□□ -1.3
A1CF-210ENST00000493415 EEPD1Q7L9B9 569 aa6.9□□□□□ -1.3
A1CF-210ENST00000493415 AACSQ86V21 672 aa6.9□□□□□ -1.3
A1CF-210ENST00000493415 GJD3Q8N144 294 aa6.9□□□□□ -1.3
A1CF-210ENST00000493415 RETREG2Q8NC44 543 aa6.9□□□□□ -1.3
A1CF-210ENST00000493415 REPS2Q8NFH8 660 aa6.9□□□□□ -1.3
A1CF-210ENST00000493415 ZBED2Q9BTP6 218 aa6.9□□□□□ -1.3
A1CF-210ENST00000493415 UBE2ZQ9H832 354 aaPredicted RBP6.9□□□□□ -1.3
A1CF-210ENST00000493415 ARMT1Q9H993 441 aa6.9□□□□□ -1.3
A1CF-210ENST00000493415 KANSL2Q9H9L4 492 aa6.9□□□□□ -1.3
A1CF-210ENST00000493415 TRMT13Q9NUP7 481 aaKnown RBP6.9□□□□□ -1.3
A1CF-210ENST00000493415 FBXO40Q9UH90 709 aa6.9□□□□□ -1.3
A1CF-210ENST00000493415 ADAMTS5Q9UNA0 930 aa6.9□□□□□ -1.3
A1CF-210ENST00000493415 NOD1Q9Y239 953 aa6.9□□□□□ -1.3
A1CF-210ENST00000493415 RIPK3Q9Y572 518 aa6.9□□□□□ -1.3
A1CF-210ENST00000493415 TNKSO95271 1327 aa6.9□□□□□ -1.3
A1CF-210ENST00000493415 BRWD1Q9NSI6 2320 aa6.9□□□□□ -1.31
A1CF-210ENST00000493415 TET1Q8NFU7 2136 aa6.89□□□□□ -1.31
A1CF-210ENST00000493415 BDP1A6H8Y1 2624 aa6.89□□□□□ -1.31
A1CF-210ENST00000493415 DNAJC25-GNG10A0A024R161 153 aa6.89□□□□□ -1.31
A1CF-210ENST00000493415 GOLIM4O00461 696 aa6.89□□□□□ -1.31
A1CF-210ENST00000493415 IPO8O15397 1037 aaKnown RBP6.89□□□□□ -1.31
A1CF-210ENST00000493415 ARHGEF15O94989 841 aa6.89□□□□□ -1.31
A1CF-210ENST00000493415 MYL3P08590 195 aa6.89□□□□□ -1.31
A1CF-210ENST00000493415 CT47B1P0C2W7 299 aaPredicted RBP6.89□□□□□ -1.31
A1CF-210ENST00000493415 SUPT20HL2P0C7V6 817 aa6.89□□□□□ -1.31
A1CF-210ENST00000493415 IL9P15248 144 aa6.89□□□□□ -1.31
A1CF-210ENST00000493415 POU3F3P20264 500 aaPredicted RBP6.89□□□□□ -1.31
A1CF-210ENST00000493415 PTCRAQ6ISU1 281 aaPredicted RBP6.89□□□□□ -1.31
A1CF-210ENST00000493415 TMED8Q6PL24 325 aaPredicted RBP6.89□□□□□ -1.31
A1CF-210ENST00000493415 SIAH1Q8IUQ4 282 aa6.89□□□□□ -1.31
A1CF-210ENST00000493415 HERC6Q8IVU3 1022 aa6.89□□□□□ -1.31
A1CF-210ENST00000493415 FBXO16Q8IX29 292 aaPredicted RBP6.89□□□□□ -1.31
A1CF-210ENST00000493415 CHMP4CQ96CF2 233 aa6.89□□□□□ -1.31
A1CF-210ENST00000493415 EAF2Q96CJ1 260 aaPredicted RBP6.89□□□□□ -1.31
A1CF-210ENST00000493415 FBXL18Q96ME1 805 aa6.89□□□□□ -1.31
A1CF-210ENST00000493415 SEZ6LQ9BYH1 1024 aa6.89□□□□□ -1.31
A1CF-210ENST00000493415 ALDH8A1Q9H2A2 487 aaPredicted RBP6.89□□□□□ -1.31
A1CF-210ENST00000493415 ACAD9Q9H845 621 aa6.89□□□□□ -1.31
A1CF-210ENST00000493415 CD320Q9NPF0 282 aa6.89□□□□□ -1.31
A1CF-210ENST00000493415 GPHNQ9NQX3 736 aaPredicted RBP6.89□□□□□ -1.31
A1CF-210ENST00000493415 TNNQ9UQP3 1299 aa6.89□□□□□ -1.31
A1CF-210ENST00000493415 COG6Q9Y2V7 657 aa6.89□□□□□ -1.31
A1CF-210ENST00000493415 ASTN1O14525 1302 aa6.89□□□□□ -1.31
A1CF-210ENST00000493415 LCTP09848 1927 aa6.89□□□□□ -1.31
A1CF-210ENST00000493415 NLRC5Q86WI3 1866 aa6.88□□□□□ -1.31
A1CF-210ENST00000493415 ASB14A6NK59 587 aa6.88□□□□□ -1.31
A1CF-210ENST00000493415 CTAGE5O15320 804 aa6.88□□□□□ -1.31
A1CF-210ENST00000493415 DCXO43602 365 aa6.88□□□□□ -1.31
A1CF-210ENST00000493415 PRKAB2O43741 272 aa6.88□□□□□ -1.31
A1CF-210ENST00000493415 NDUFB10O96000 172 aa6.88□□□□□ -1.31
A1CF-210ENST00000493415 TRIM27P14373 513 aa6.88□□□□□ -1.31
A1CF-210ENST00000493415 SMPD1P17405 629 aa6.88□□□□□ -1.31
A1CF-210ENST00000493415 RFC2P35250 354 aa6.88□□□□□ -1.31
A1CF-210ENST00000493415 RARSP54136 660 aaKnown RBP6.88□□□□□ -1.31
A1CF-210ENST00000493415 CNTN2Q02246 1040 aa6.88□□□□□ -1.31
A1CF-210ENST00000493415 KIAA1211Q6ZU35 1233 aa6.88□□□□□ -1.31
A1CF-210ENST00000493415 C16orf86Q6ZW13 317 aa6.88□□□□□ -1.31
A1CF-210ENST00000493415 SPRED2Q7Z698 418 aa6.88□□□□□ -1.31
A1CF-210ENST00000493415 PRPF38AQ8NAV1 312 aaKnown RBP6.88□□□□□ -1.31
A1CF-210ENST00000493415 SLC43A3Q8NBI5 491 aa6.88□□□□□ -1.31
A1CF-210ENST00000493415 CHST13Q8NET6 341 aa6.88□□□□□ -1.31
A1CF-210ENST00000493415 PHOSPHO2Q8TCD6 241 aa6.88□□□□□ -1.31
A1CF-210ENST00000493415 PPP1R13LQ8WUF5 828 aa6.88□□□□□ -1.31
A1CF-210ENST00000493415 ARHGAP45Q92619 1136 aa6.88□□□□□ -1.31
A1CF-210ENST00000493415 FGD4Q96M96 766 aa6.88□□□□□ -1.31
A1CF-210ENST00000493415 AGBL1Q96MI9 1066 aa6.88□□□□□ -1.31
A1CF-210ENST00000493415 MKNK2Q9HBH9 465 aa6.88□□□□□ -1.31
A1CF-210ENST00000493415 ATP8A2Q9NTI2 1148 aa6.88□□□□□ -1.31
A1CF-210ENST00000493415 RNF146Q9NTX7 359 aa6.88□□□□□ -1.31
A1CF-210ENST00000493415 REV3LO60673 3130 aa6.87□□□□□ -1.31
A1CF-210ENST00000493415 GRIN2DO15399 1336 aa6.87□□□□□ -1.31
A1CF-210ENST00000493415 RAD50Q92878 1312 aa6.87□□□□□ -1.31
A1CF-210ENST00000493415 LCHNA4D1U4 455 aa6.87□□□□□ -1.31
A1CF-210ENST00000493415 ZNF316A6NFI3 1004 aaPredicted RBP6.87□□□□□ -1.31
A1CF-210ENST00000493415 USP17L12C9JPN9 530 aa6.87□□□□□ -1.31
A1CF-210ENST00000493415 USP17L21D6R901 530 aa6.87□□□□□ -1.31
A1CF-210ENST00000493415 F5H6K3 240 aa6.87□□□□□ -1.31
A1CF-210ENST00000493415 ALAS1P13196 640 aa6.87□□□□□ -1.31
A1CF-210ENST00000493415 CD44P16070 742 aaKnown RBP6.87□□□□□ -1.31
A1CF-210ENST00000493415 ATP8B2P98198 1209 aa6.87□□□□□ -1.31
A1CF-210ENST00000493415 KLRC3Q07444 240 aa6.87□□□□□ -1.31
A1CF-210ENST00000493415 BFSP2Q13515 415 aa6.87□□□□□ -1.31
A1CF-210ENST00000493415 LEXMQ3ZCV2 418 aa6.87□□□□□ -1.31
A1CF-210ENST00000493415 C12orf60Q5U649 245 aa6.87□□□□□ -1.31
A1CF-210ENST00000493415 FAM117BQ6P1L5 589 aa6.87□□□□□ -1.31
A1CF-210ENST00000493415 TMCO2Q7Z6W1 182 aaPredicted RBP6.87□□□□□ -1.31
A1CF-210ENST00000493415 ERC1Q8IUD2 1116 aa6.87□□□□□ -1.31
A1CF-210ENST00000493415 FAM178BQ8IXR5 827 aa6.87□□□□□ -1.31
A1CF-210ENST00000493415 FTSJ3Q8IY81 847 aaKnown RBP6.87□□□□□ -1.31
A1CF-210ENST00000493415 LRRC47Q8N1G4 583 aaKnown RBP6.87□□□□□ -1.31
A1CF-210ENST00000493415 TMEM57Q8N5G2 664 aa6.87□□□□□ -1.31
A1CF-210ENST00000493415 OR6J1Q8NGC5 347 aa6.87□□□□□ -1.31
A1CF-210ENST00000493415 SSH3Q8TE77 659 aa6.87□□□□□ -1.31
A1CF-210ENST00000493415 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.87□□□□□ -1.31
A1CF-210ENST00000493415 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 150.9 ms