RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 PKN1Q16512 942 aa13.32□□□□□ -0.28
LSM2-214ENST00000493387 POTEEQ6S8J3 1075 aa13.32□□□□□ -0.28
LSM2-214ENST00000493387 HEATR3Q7Z4Q2 680 aa13.32□□□□□ -0.28
LSM2-214ENST00000493387 MCF2L2Q86YR7 1114 aa13.32□□□□□ -0.28
LSM2-214ENST00000493387 RGS22Q8NE09 1264 aa13.32□□□□□ -0.28
LSM2-214ENST00000493387 DDX11Q96FC9 970 aa13.32□□□□□ -0.28
LSM2-214ENST00000493387 AGBL1Q96MI9 1066 aa13.32□□□□□ -0.28
LSM2-214ENST00000493387 MOV10L1Q9BXT6 1211 aaKnown RBP13.32□□□□□ -0.28
LSM2-214ENST00000493387 WBP1LQ9NX94 342 aa13.32□□□□□ -0.28
LSM2-214ENST00000493387 BARHL2Q9NY43 387 aa13.32□□□□□ -0.28
LSM2-214ENST00000493387 PARP14Q460N5 1801 aa13.32□□□□□ -0.28
LSM2-214ENST00000493387 hCG_1642624A0A1W2PR95 340 aa13.31□□□□□ -0.28
LSM2-214ENST00000493387 PPP1R11O60927 126 aaPredicted RBP13.31□□□□□ -0.28
LSM2-214ENST00000493387 TBC1D8O95759 1140 aa13.31□□□□□ -0.28
LSM2-214ENST00000493387 FDPSP14324 419 aaKnown RBP13.31□□□□□ -0.28
LSM2-214ENST00000493387 PDCP20941 246 aa13.31□□□□□ -0.28
LSM2-214ENST00000493387 TRIM29Q14134 588 aa13.31□□□□□ -0.28
LSM2-214ENST00000493387 Q3C1V9 767 aa13.31□□□□□ -0.28
LSM2-214ENST00000493387 USH1GQ495M9 461 aa13.31□□□□□ -0.28
LSM2-214ENST00000493387 GALNT17Q6IS24 598 aa13.31□□□□□ -0.28
LSM2-214ENST00000493387 NCAPG2Q86XI2 1143 aa13.31□□□□□ -0.28
LSM2-214ENST00000493387 JMYQ8N9B5 988 aa13.31□□□□□ -0.28
LSM2-214ENST00000493387 TRERF1Q96PN7 1200 aa13.31□□□□□ -0.28
LSM2-214ENST00000493387 ALG1Q9BT22 464 aa13.31□□□□□ -0.28
LSM2-214ENST00000493387 ACAD9Q9H845 621 aa13.31□□□□□ -0.28
LSM2-214ENST00000493387 CWC22Q9HCG8 908 aaKnown RBP13.31□□□□□ -0.28
LSM2-214ENST00000493387 RNF146Q9NTX7 359 aa13.31□□□□□ -0.28
LSM2-214ENST00000493387 MAP3K20Q9NYL2 800 aaKnown RBP13.31□□□□□ -0.28
LSM2-214ENST00000493387 ESYT2A0FGR8 921 aa13.3□□□□□ -0.28
LSM2-214ENST00000493387 STXBP3O00186 592 aa13.3□□□□□ -0.28
LSM2-214ENST00000493387 STRNO43815 780 aa13.3□□□□□ -0.28
LSM2-214ENST00000493387 PPFIA3O75145 1194 aa13.3□□□□□ -0.28
LSM2-214ENST00000493387 ERCC3P19447 782 aa13.3□□□□□ -0.28
LSM2-214ENST00000493387 CALML3P27482 149 aa13.3□□□□□ -0.28
LSM2-214ENST00000493387 GJB2P29033 226 aa13.3□□□□□ -0.28
LSM2-214ENST00000493387 GNA11P29992 359 aa13.3□□□□□ -0.28
LSM2-214ENST00000493387 SLC4A3P48751 1232 aa13.3□□□□□ -0.28
LSM2-214ENST00000493387 MRPL12P52815 198 aaKnown RBP13.3□□□□□ -0.28
LSM2-214ENST00000493387 NAPAP54920 295 aa13.3□□□□□ -0.28
LSM2-214ENST00000493387 SP3Q02447 781 aa13.3□□□□□ -0.28
LSM2-214ENST00000493387 KIF22Q14807 665 aa13.3□□□□□ -0.28
LSM2-214ENST00000493387 ARHGEF6Q15052 776 aa13.3□□□□□ -0.28
LSM2-214ENST00000493387 WWC2Q6AWC2 1192 aa13.3□□□□□ -0.28
LSM2-214ENST00000493387 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.3□□□□□ -0.28
LSM2-214ENST00000493387 COA7Q96BR5 231 aa13.3□□□□□ -0.28
LSM2-214ENST00000493387 C6orf50Q9HD87 102 aa13.3□□□□□ -0.28
LSM2-214ENST00000493387 GPR25O00155 361 aa13.29□□□□□ -0.28
LSM2-214ENST00000493387 NLRP5P59047 1200 aa13.29□□□□□ -0.28
LSM2-214ENST00000493387 MCTP2Q6DN12 878 aa13.29□□□□□ -0.28
LSM2-214ENST00000493387 ABRAQ8N0Z2 381 aa13.29□□□□□ -0.28
LSM2-214ENST00000493387 BICD2Q8TD16 824 aa13.29□□□□□ -0.28
LSM2-214ENST00000493387 GPKOWQ92917 476 aaPredicted RBP eCLIP13.29□□□□□ -0.28
LSM2-214ENST00000493387 CUL5Q93034 780 aa13.29□□□□□ -0.28
LSM2-214ENST00000493387 C8orf76Q96K31 380 aa13.29□□□□□ -0.28
LSM2-214ENST00000493387 PSTPIP2Q9H939 334 aa13.29□□□□□ -0.28
LSM2-214ENST00000493387 RIPK3Q9Y572 518 aa13.29□□□□□ -0.28
LSM2-214ENST00000493387 IVNS1ABPQ9Y6Y0 642 aa13.29□□□□□ -0.28
LSM2-214ENST00000493387 A0A0G2JMZ2 1700 aa13.29□□□□□ -0.28
LSM2-214ENST00000493387 SMCO2A6NFE2 343 aa13.28□□□□□ -0.28
LSM2-214ENST00000493387 GCOM1H8Y6P7 765 aaPredicted RBP13.28□□□□□ -0.28
LSM2-214ENST00000493387 FKTNO75072 461 aa13.28□□□□□ -0.28
LSM2-214ENST00000493387 POLR2MP0CAP2 368 aa13.28□□□□□ -0.28
LSM2-214ENST00000493387 FCER1AP12319 257 aa13.28□□□□□ -0.28
LSM2-214ENST00000493387 ADCY7P51828 1080 aa13.28□□□□□ -0.28
LSM2-214ENST00000493387 FCGRTP55899 365 aa13.28□□□□□ -0.28
LSM2-214ENST00000493387 KCTD2Q14681 263 aa13.28□□□□□ -0.28
LSM2-214ENST00000493387 SAFBQ15424 915 aaKnown RBP eCLIP13.28□□□□□ -0.28
LSM2-214ENST00000493387 WDR78Q5VTH9 848 aa13.28□□□□□ -0.28
LSM2-214ENST00000493387 PLEKHH3Q7Z736 793 aa13.28□□□□□ -0.28
LSM2-214ENST00000493387 CLEC4DQ8WXI8 215 aa13.28□□□□□ -0.28
LSM2-214ENST00000493387 ERO1AQ96HE7 468 aa13.28□□□□□ -0.28
LSM2-214ENST00000493387 MMP19Q99542 508 aa13.28□□□□□ -0.28
LSM2-214ENST00000493387 ZMYND12Q9H0C1 365 aa13.28□□□□□ -0.28
LSM2-214ENST00000493387 R3HDMLQ9H3Y0 253 aa13.28□□□□□ -0.28
LSM2-214ENST00000493387 BRMS1Q9HCU9 246 aa13.28□□□□□ -0.28
LSM2-214ENST00000493387 RIC8AQ9NPQ8 531 aa13.28□□□□□ -0.28
LSM2-214ENST00000493387 HOMER2Q9NSB8 354 aa13.28□□□□□ -0.28
LSM2-214ENST00000493387 VPS54Q9P1Q0 977 aa13.28□□□□□ -0.28
LSM2-214ENST00000493387 PFASO15067 1338 aa13.28□□□□□ -0.28
LSM2-214ENST00000493387 MYH6P13533 1939 aa13.27□□□□□ -0.28
LSM2-214ENST00000493387 SLC15A5A6NIM6 579 aa13.27□□□□□ -0.29
LSM2-214ENST00000493387 H3BQV1 296 aa13.27□□□□□ -0.29
LSM2-214ENST00000493387 PIK3CDO00329 1044 aa13.27□□□□□ -0.29
LSM2-214ENST00000493387 PEX10O60683 326 aa13.27□□□□□ -0.29
LSM2-214ENST00000493387 GNRH1P01148 92 aa13.27□□□□□ -0.29
LSM2-214ENST00000493387 HOXD10P28358 340 aa13.27□□□□□ -0.29
LSM2-214ENST00000493387 LACTBP83111 547 aaPredicted RBP13.27□□□□□ -0.29
LSM2-214ENST00000493387 GHRHRQ02643 423 aa13.27□□□□□ -0.29
LSM2-214ENST00000493387 MUM1L1Q5H9M0 696 aa13.27□□□□□ -0.29
LSM2-214ENST00000493387 IFFO2Q5TF58 517 aa13.27□□□□□ -0.29
LSM2-214ENST00000493387 LARP1BQ659C4 914 aaKnown RBP13.27□□□□□ -0.29
LSM2-214ENST00000493387 ANKRD35Q8N283 1001 aa13.27□□□□□ -0.29
LSM2-214ENST00000493387 DAGLBQ8NCG7 672 aa13.27□□□□□ -0.29
LSM2-214ENST00000493387 FBXO18Q8NFZ0 1043 aa13.27□□□□□ -0.29
LSM2-214ENST00000493387 PORCNQ9H237 461 aa13.27□□□□□ -0.29
LSM2-214ENST00000493387 EFCC1Q9HA90 598 aa13.27□□□□□ -0.29
LSM2-214ENST00000493387 FOXD4L1Q9NU39 408 aa13.27□□□□□ -0.29
LSM2-214ENST00000493387 SLC5A4Q9NY91 659 aa13.27□□□□□ -0.29
LSM2-214ENST00000493387 COL11A1P12107 1806 aaPredicted RBP13.27□□□□□ -0.29
LSM2-214ENST00000493387 NFIBO00712 420 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms