RNA–Protein interactions for RNA: ENST00000493341.1

VPS13A-212, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-212ENST00000493341 IL17RAQ96F46 866 aa6.03□□□□□ -1.44
VPS13A-212ENST00000493341 COQ6Q9Y2Z9 468 aa6.03□□□□□ -1.44
VPS13A-212ENST00000493341 ACTL7BQ9Y614 415 aa6.03□□□□□ -1.44
VPS13A-212ENST00000493341 COL17A1Q9UMD9 1497 aaPredicted RBP6.02□□□□□ -1.45
VPS13A-212ENST00000493341 MEGF11A6BM72 1044 aa6.02□□□□□ -1.45
VPS13A-212ENST00000493341 MT-CO1P00395 513 aa6.02□□□□□ -1.45
VPS13A-212ENST00000493341 SRGAP2CP0DJJ0 459 aa6.02□□□□□ -1.45
VPS13A-212ENST00000493341 NID1P14543 1247 aa6.02□□□□□ -1.45
VPS13A-212ENST00000493341 ITIH2P19823 946 aa6.02□□□□□ -1.45
VPS13A-212ENST00000493341 KIF18BQ86Y91 864 aa6.02□□□□□ -1.45
VPS13A-212ENST00000493341 PPIL6Q8IXY8 311 aa6.02□□□□□ -1.45
VPS13A-212ENST00000493341 FBXL18Q96ME1 805 aa6.02□□□□□ -1.45
VPS13A-212ENST00000493341 MENTQ9BUN1 341 aa6.02□□□□□ -1.45
VPS13A-212ENST00000493341 SUGCTQ9HAC7 445 aa6.02□□□□□ -1.45
VPS13A-212ENST00000493341 LGR6Q9HBX8 967 aa6.02□□□□□ -1.45
VPS13A-212ENST00000493341 VTA1Q9NP79 307 aa6.02□□□□□ -1.45
VPS13A-212ENST00000493341 GPRC5CQ9NQ84 441 aa6.02□□□□□ -1.45
VPS13A-212ENST00000493341 PCOLCE2Q9UKZ9 415 aa6.02□□□□□ -1.45
VPS13A-212ENST00000493341 SF3B6Q9Y3B4 125 aaKnown RBP6.02□□□□□ -1.45
VPS13A-212ENST00000493341 CBX4O00257 560 aa6.01□□□□□ -1.45
VPS13A-212ENST00000493341 NAT1P18440 290 aa6.01□□□□□ -1.45
VPS13A-212ENST00000493341 PAX3P23760 479 aa6.01□□□□□ -1.45
VPS13A-212ENST00000493341 DSG1Q02413 1049 aa6.01□□□□□ -1.45
VPS13A-212ENST00000493341 RNFT1Q5M7Z0 435 aa6.01□□□□□ -1.45
VPS13A-212ENST00000493341 FDX2Q6P4F2 183 aa6.01□□□□□ -1.45
VPS13A-212ENST00000493341 KIAA1211Q6ZU35 1233 aa6.01□□□□□ -1.45
VPS13A-212ENST00000493341 DCAF11Q8TEB1 546 aa6.01□□□□□ -1.45
VPS13A-212ENST00000493341 TIFAQ96CG3 184 aa6.01□□□□□ -1.45
VPS13A-212ENST00000493341 FUBP3Q96I24 572 aaKnown RBP eCLIP6.01□□□□□ -1.45
VPS13A-212ENST00000493341 BTBD6Q96KE9 485 aa6.01□□□□□ -1.45
VPS13A-212ENST00000493341 ARPC5LQ9BPX5 153 aa6.01□□□□□ -1.45
VPS13A-212ENST00000493341 PHF20Q9BVI0 1012 aa6.01□□□□□ -1.45
VPS13A-212ENST00000493341 COL25A1Q9BXS0 654 aaPredicted RBP6.01□□□□□ -1.45
VPS13A-212ENST00000493341 CABP5Q9NP86 173 aa6.01□□□□□ -1.45
VPS13A-212ENST00000493341 EMC7Q9NPA0 242 aa6.01□□□□□ -1.45
VPS13A-212ENST00000493341 SPTLC3Q9NUV7 552 aa6.01□□□□□ -1.45
VPS13A-212ENST00000493341 THG1LQ9NWX6 298 aaKnown RBP6.01□□□□□ -1.45
VPS13A-212ENST00000493341 OBP2AQ9NY56 170 aa6.01□□□□□ -1.45
VPS13A-212ENST00000493341 MINPP1Q9UNW1 487 aa6.01□□□□□ -1.45
VPS13A-212ENST00000493341 LRRN2O75325 713 aa6.01□□□□□ -1.45
VPS13A-212ENST00000493341 PF4V1P10720 104 aa6.01□□□□□ -1.45
VPS13A-212ENST00000493341 ETV3P41162 512 aa6.01□□□□□ -1.45
VPS13A-212ENST00000493341 CYP4F3Q08477 520 aa6.01□□□□□ -1.45
VPS13A-212ENST00000493341 C4orf46Q504U0 113 aa6.01□□□□□ -1.45
VPS13A-212ENST00000493341 C10orf62Q5T681 223 aaPredicted RBP6.01□□□□□ -1.45
VPS13A-212ENST00000493341 C11orf74Q86VG3 221 aa6.01□□□□□ -1.45
VPS13A-212ENST00000493341 CBARPQ8N350 705 aaPredicted RBP6.01□□□□□ -1.45
VPS13A-212ENST00000493341 SMG8Q8ND04 991 aaKnown RBP6.01□□□□□ -1.45
VPS13A-212ENST00000493341 SVIPQ8NHG7 77 aa6.01□□□□□ -1.45
VPS13A-212ENST00000493341 RNF141Q8WVD5 230 aa6.01□□□□□ -1.45
VPS13A-212ENST00000493341 ACDQ96AP0 544 aa6.01□□□□□ -1.45
VPS13A-212ENST00000493341 AHCYL2Q96HN2 611 aaKnown RBP6.01□□□□□ -1.45
VPS13A-212ENST00000493341 ORAI3Q9BRQ5 295 aa6.01□□□□□ -1.45
VPS13A-212ENST00000493341 ASPNQ9BXN1 380 aa6.01□□□□□ -1.45
VPS13A-212ENST00000493341 PRDM6Q9NQX0 595 aa6.01□□□□□ -1.45
VPS13A-212ENST00000493341 ENAMQ9NRM1 1142 aa6.01□□□□□ -1.45
VPS13A-212ENST00000493341 WDR64B1ANS9 1081 aa6□□□□□ -1.45
VPS13A-212ENST00000493341 H0Y8X5 98 aa6□□□□□ -1.45
VPS13A-212ENST00000493341 RBAK-RBAKDNI3L0D1 243 aa6□□□□□ -1.45
VPS13A-212ENST00000493341 STXBP3O00186 592 aa6□□□□□ -1.45
VPS13A-212ENST00000493341 NBPF7P0C2Y1 421 aaPredicted RBP6□□□□□ -1.45
VPS13A-212ENST00000493341 RAB6AP20340 208 aa6□□□□□ -1.45
VPS13A-212ENST00000493341 VPS72Q15906 364 aa6□□□□□ -1.45
VPS13A-212ENST00000493341 CXorf57Q6NSI4 855 aaKnown RBP6□□□□□ -1.45
VPS13A-212ENST00000493341 PNMA8AQ86V59 439 aaPredicted RBP6□□□□□ -1.45
VPS13A-212ENST00000493341 IFNL3Q8IZI9 196 aa6□□□□□ -1.45
VPS13A-212ENST00000493341 DTWD1Q8N5C7 304 aa6□□□□□ -1.45
VPS13A-212ENST00000493341 KREMEN2Q8NCW0 462 aa6□□□□□ -1.45
VPS13A-212ENST00000493341 DAGLAQ9Y4D2 1042 aa6□□□□□ -1.45
VPS13A-212ENST00000493341 TTBK1Q5TCY1 1321 aaPredicted RBP6□□□□□ -1.45
VPS13A-212ENST00000493341 TRAF5O00463 557 aa5.99□□□□□ -1.45
VPS13A-212ENST00000493341 SLITRK5O94991 958 aa5.99□□□□□ -1.45
VPS13A-212ENST00000493341 THBDP07204 575 aa5.99□□□□□ -1.45
VPS13A-212ENST00000493341 POU4F1Q01851 419 aa5.99□□□□□ -1.45
VPS13A-212ENST00000493341 COL9A3Q14050 684 aaPredicted RBP5.99□□□□□ -1.45
VPS13A-212ENST00000493341 DHX8Q14562 1220 aaKnown RBP5.99□□□□□ -1.45
VPS13A-212ENST00000493341 LAPTM4AQ15012 233 aa5.99□□□□□ -1.45
VPS13A-212ENST00000493341 MINDY4Q4G0A6 757 aa5.99□□□□□ -1.45
VPS13A-212ENST00000493341 PGM2L1Q6PCE3 622 aa5.99□□□□□ -1.45
VPS13A-212ENST00000493341 ILDR2Q71H61 639 aa5.99□□□□□ -1.45
VPS13A-212ENST00000493341 TMC3Q7Z5M5 1100 aa5.99□□□□□ -1.45
VPS13A-212ENST00000493341 USP33Q8TEY7 942 aa5.99□□□□□ -1.45
VPS13A-212ENST00000493341 CHTF18Q8WVB6 975 aa5.99□□□□□ -1.45
VPS13A-212ENST00000493341 ZNF700Q9H0M5 742 aa5.99□□□□□ -1.45
VPS13A-212ENST00000493341 TIAF1O95411 115 aa5.99□□□□□ -1.45
VPS13A-212ENST00000493341 IFIT2P09913 472 aaKnown RBP5.99□□□□□ -1.45
VPS13A-212ENST00000493341 U2AF1L5P0DN76 240 aaPredicted RBP5.99□□□□□ -1.45
VPS13A-212ENST00000493341 KPNA1P52294 538 aaPredicted RBP5.99□□□□□ -1.45
VPS13A-212ENST00000493341 U2AF1Q01081 240 aaKnown RBP eCLIP5.99□□□□□ -1.45
VPS13A-212ENST00000493341 PCBP2Q15366 365 aaKnown RBP eCLIP5.99□□□□□ -1.45
VPS13A-212ENST00000493341 CWF19L1Q69YN2 538 aaKnown RBP5.99□□□□□ -1.45
VPS13A-212ENST00000493341 C2CD4AQ8NCU7 369 aaPredicted RBP5.99□□□□□ -1.45
VPS13A-212ENST00000493341 LRGUKQ96M69 825 aa5.99□□□□□ -1.45
VPS13A-212ENST00000493341 GSX1Q9H4S2 264 aaPredicted RBP5.99□□□□□ -1.45
VPS13A-212ENST00000493341 PRDM11Q9NQV5 511 aa5.99□□□□□ -1.45
VPS13A-212ENST00000493341 ZBTB21Q9ULJ3 1066 aa5.99□□□□□ -1.45
VPS13A-212ENST00000493341 ANKRD6Q9Y2G4 727 aa5.99□□□□□ -1.45
VPS13A-212ENST00000493341 SH3BP5O60239 455 aa5.98□□□□□ -1.45
VPS13A-212ENST00000493341 ULK1O75385 1050 aa5.98□□□□□ -1.45
VPS13A-212ENST00000493341 CD3EP07766 207 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms