RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 RNF146Q9NTX7 359 aa13.08□□□□□ -0.32
SNRNP200-207ENST00000493271 CHD9Q3L8U1 2897 aa13.08□□□□□ -0.32
SNRNP200-207ENST00000493271 MYH4Q9Y623 1939 aa13.07□□□□□ -0.32
SNRNP200-207ENST00000493271 GRXCR1A8MXD5 290 aa13.07□□□□□ -0.32
SNRNP200-207ENST00000493271 TMEM232C9JQI7 657 aa13.07□□□□□ -0.32
SNRNP200-207ENST00000493271 APPP05067 770 aa13.07□□□□□ -0.32
SNRNP200-207ENST00000493271 SLC1A4P43007 532 aa13.07□□□□□ -0.32
SNRNP200-207ENST00000493271 CXCL17Q6UXB2 119 aa13.07□□□□□ -0.32
SNRNP200-207ENST00000493271 ADAMTS19Q8TE59 1207 aa13.07□□□□□ -0.32
SNRNP200-207ENST00000493271 PPM1EQ8WY54 764 aa13.07□□□□□ -0.32
SNRNP200-207ENST00000493271 VTA1Q9NP79 307 aa13.07□□□□□ -0.32
SNRNP200-207ENST00000493271 HOMER2Q9NSB8 354 aa13.07□□□□□ -0.32
SNRNP200-207ENST00000493271 PCDHA11Q9Y5I1 949 aa13.07□□□□□ -0.32
SNRNP200-207ENST00000493271 SUPT20HL2P0C7V6 817 aa13.06□□□□□ -0.32
SNRNP200-207ENST00000493271 IGFBP4P22692 258 aa13.06□□□□□ -0.32
SNRNP200-207ENST00000493271 IRX5P78411 483 aaPredicted RBP13.06□□□□□ -0.32
SNRNP200-207ENST00000493271 BEX3Q00994 111 aa13.06□□□□□ -0.32
SNRNP200-207ENST00000493271 CNTN2Q02246 1040 aa13.06□□□□□ -0.32
SNRNP200-207ENST00000493271 IKQ13123 557 aaPredicted RBP13.06□□□□□ -0.32
SNRNP200-207ENST00000493271 ADGRE1Q14246 886 aa13.06□□□□□ -0.32
SNRNP200-207ENST00000493271 IFNL3Q8IZI9 196 aa13.06□□□□□ -0.32
SNRNP200-207ENST00000493271 LRRC47Q8N1G4 583 aaKnown RBP13.06□□□□□ -0.32
SNRNP200-207ENST00000493271 TRERF1Q96PN7 1200 aa13.06□□□□□ -0.32
SNRNP200-207ENST00000493271 UHRF1Q96T88 793 aaPredicted RBP13.06□□□□□ -0.32
SNRNP200-207ENST00000493271 NOC4LQ9BVI4 516 aaKnown RBP13.06□□□□□ -0.32
SNRNP200-207ENST00000493271 EPB41L4AQ9HCS5 686 aaPredicted RBP13.06□□□□□ -0.32
SNRNP200-207ENST00000493271 CXXC1Q9P0U4 656 aaPredicted RBP13.06□□□□□ -0.32
SNRNP200-207ENST00000493271 SLC4A7Q9Y6M7 1214 aa13.06□□□□□ -0.32
SNRNP200-207ENST00000493271 ASTN1O14525 1302 aa13.06□□□□□ -0.32
SNRNP200-207ENST00000493271 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.05□□□□□ -0.32
SNRNP200-207ENST00000493271 SOWAHBA6NEL2 793 aa13.05□□□□□ -0.32
SNRNP200-207ENST00000493271 DYNC1LI2O43237 492 aaPredicted RBP13.05□□□□□ -0.32
SNRNP200-207ENST00000493271 PRDM1O75626 825 aa13.05□□□□□ -0.32
SNRNP200-207ENST00000493271 PPP2R2DQ66LE6 453 aa13.05□□□□□ -0.32
SNRNP200-207ENST00000493271 OTOP2Q7RTS6 562 aa13.05□□□□□ -0.32
SNRNP200-207ENST00000493271 STK11IPQ8N1F8 1099 aa13.05□□□□□ -0.32
SNRNP200-207ENST00000493271 MORC4Q8TE76 937 aa13.05□□□□□ -0.32
SNRNP200-207ENST00000493271 NKX2-4Q9H2Z4 354 aa13.05□□□□□ -0.32
SNRNP200-207ENST00000493271 POLR3EQ9NVU0 708 aa13.05□□□□□ -0.32
SNRNP200-207ENST00000493271 ADD3Q9UEY8 706 aaKnown RBP13.05□□□□□ -0.32
SNRNP200-207ENST00000493271 PNMA2Q9UL42 364 aa13.05□□□□□ -0.32
SNRNP200-207ENST00000493271 ISY1Q9ULR0 285 aaKnown RBP13.05□□□□□ -0.32
SNRNP200-207ENST00000493271 ZNF536O15090 1300 aa13.05□□□□□ -0.32
SNRNP200-207ENST00000493271 MCM3APO60318 1980 aa13.05□□□□□ -0.32
SNRNP200-207ENST00000493271 B4GALT4O60513 344 aa13.04□□□□□ -0.32
SNRNP200-207ENST00000493271 ALAS1P13196 640 aa13.04□□□□□ -0.32
SNRNP200-207ENST00000493271 SMPD1P17405 629 aa13.04□□□□□ -0.32
SNRNP200-207ENST00000493271 POU3F3P20264 500 aaPredicted RBP13.04□□□□□ -0.32
SNRNP200-207ENST00000493271 RFC2P35250 354 aa13.04□□□□□ -0.32
SNRNP200-207ENST00000493271 CPT1AP50416 773 aa13.04□□□□□ -0.32
SNRNP200-207ENST00000493271 TFAP4Q01664 338 aa13.04□□□□□ -0.32
SNRNP200-207ENST00000493271 BRDTQ58F21 947 aaPredicted RBP13.04□□□□□ -0.32
SNRNP200-207ENST00000493271 RCSD1Q6JBY9 416 aa13.04□□□□□ -0.32
SNRNP200-207ENST00000493271 AGBL1Q96MI9 1066 aa13.04□□□□□ -0.32
SNRNP200-207ENST00000493271 MPHOSPH6Q99547 160 aaKnown RBP13.04□□□□□ -0.32
SNRNP200-207ENST00000493271 NAPBQ9H115 298 aa13.04□□□□□ -0.32
SNRNP200-207ENST00000493271 CYP39A1Q9NYL5 469 aa13.04□□□□□ -0.32
SNRNP200-207ENST00000493271 YBX2Q9Y2T7 364 aaKnown RBP13.04□□□□□ -0.32
SNRNP200-207ENST00000493271 GRIN2DO15399 1336 aa13.04□□□□□ -0.32
SNRNP200-207ENST00000493271 TTC41PQ6P2S7 1318 aa13.04□□□□□ -0.32
SNRNP200-207ENST00000493271 LRRC37A2A6NM11 1700 aa13.03□□□□□ -0.32
SNRNP200-207ENST00000493271 ERC2O15083 957 aa13.03□□□□□ -0.32
SNRNP200-207ENST00000493271 ACTN1P12814 892 aa13.03□□□□□ -0.32
SNRNP200-207ENST00000493271 CCL23P55773 120 aa13.03□□□□□ -0.32
SNRNP200-207ENST00000493271 PPARAQ07869 468 aa13.03□□□□□ -0.32
SNRNP200-207ENST00000493271 DUSP28Q4G0W2 176 aa13.03□□□□□ -0.32
SNRNP200-207ENST00000493271 TAPT1Q6NXT6 567 aa13.03□□□□□ -0.32
SNRNP200-207ENST00000493271 PHOSPHO2Q8TCD6 241 aa13.03□□□□□ -0.32
SNRNP200-207ENST00000493271 C1QTNF1Q9BXJ1 281 aa13.03□□□□□ -0.32
SNRNP200-207ENST00000493271 WNT8AQ9H1J5 351 aa13.03□□□□□ -0.32
SNRNP200-207ENST00000493271 ALDH8A1Q9H2A2 487 aaPredicted RBP13.03□□□□□ -0.32
SNRNP200-207ENST00000493271 STX8Q9UNK0 236 aa13.03□□□□□ -0.32
SNRNP200-207ENST00000493271 RAD50Q92878 1312 aa13.03□□□□□ -0.32
SNRNP200-207ENST00000493271 TSPY2A6NKD2 308 aa13.02□□□□□ -0.33
SNRNP200-207ENST00000493271 ZBBXA8MT70 800 aa13.02□□□□□ -0.33
SNRNP200-207ENST00000493271 M0R2C6 588 aa13.02□□□□□ -0.33
SNRNP200-207ENST00000493271 GTPBP6O43824 516 aaPredicted RBP13.02□□□□□ -0.33
SNRNP200-207ENST00000493271 SMARCA5O60264 1052 aaPredicted RBP13.02□□□□□ -0.33
SNRNP200-207ENST00000493271 KPNA6O60684 536 aa13.02□□□□□ -0.33
SNRNP200-207ENST00000493271 ICAM1P05362 532 aa13.02□□□□□ -0.33
SNRNP200-207ENST00000493271 ATP2A2P16615 1042 aaKnown RBP13.02□□□□□ -0.33
SNRNP200-207ENST00000493271 MCCP23508 829 aa13.02□□□□□ -0.33
SNRNP200-207ENST00000493271 CCDC85BQ15834 202 aaPredicted RBP13.02□□□□□ -0.33
SNRNP200-207ENST00000493271 KIAA1211Q6ZU35 1233 aa13.02□□□□□ -0.33
SNRNP200-207ENST00000493271 DCAF4Q8WV16 495 aa13.02□□□□□ -0.33
SNRNP200-207ENST00000493271 SLC9A7Q96T83 725 aa13.02□□□□□ -0.33
SNRNP200-207ENST00000493271 TRPV6Q9H1D0 765 aa13.02□□□□□ -0.33
SNRNP200-207ENST00000493271 DCTPP1Q9H773 170 aa13.02□□□□□ -0.33
SNRNP200-207ENST00000493271 CHD7Q9P2D1 2997 aa13.02□□□□□ -0.33
SNRNP200-207ENST00000493271 CCPG1Q9ULG6 757 aa13.02□□□□□ -0.33
SNRNP200-207ENST00000493271 PRR12Q9ULL5 1215 aa13.02□□□□□ -0.33
SNRNP200-207ENST00000493271 UMODL1Q5DID0 1318 aa13.02□□□□□ -0.33
SNRNP200-207ENST00000493271 PITPNM1O00562 1244 aa13.01□□□□□ -0.33
SNRNP200-207ENST00000493271 NKRFO15226 690 aaKnown RBP eCLIP13.01□□□□□ -0.33
SNRNP200-207ENST00000493271 PTPN11Q06124 597 aaPredicted RBP13.01□□□□□ -0.33
SNRNP200-207ENST00000493271 TMEM67Q5HYA8 995 aa13.01□□□□□ -0.33
SNRNP200-207ENST00000493271 NSMFQ6X4W1 530 aa13.01□□□□□ -0.33
SNRNP200-207ENST00000493271 FBXO16Q8IX29 292 aaPredicted RBP13.01□□□□□ -0.33
SNRNP200-207ENST00000493271 MTG1Q9BT17 334 aaPredicted RBP13.01□□□□□ -0.33
SNRNP200-207ENST00000493271 GPHNQ9NQX3 736 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms