RNA–Protein interactions for RNA: ENST00000493199.1

NEK4-205, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 355 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-205ENST00000493199 PLEKHA8P1O95397 391 aa6.09□□□□□ -1.43
NEK4-205ENST00000493199 MMP1P03956 469 aa6.09□□□□□ -1.43
NEK4-205ENST00000493199 ZSCAN22P10073 491 aaPredicted RBP6.09□□□□□ -1.43
NEK4-205ENST00000493199 HSPA8P11142 646 aaKnown RBP6.09□□□□□ -1.43
NEK4-205ENST00000493199 FCER1AP12319 257 aa6.09□□□□□ -1.43
NEK4-205ENST00000493199 ALAS1P13196 640 aa6.09□□□□□ -1.43
NEK4-205ENST00000493199 GCFC2P16383 781 aaKnown RBP6.09□□□□□ -1.43
NEK4-205ENST00000493199 SYT1P21579 422 aa6.09□□□□□ -1.43
NEK4-205ENST00000493199 CDC27P30260 824 aa6.09□□□□□ -1.43
NEK4-205ENST00000493199 SLC16A2P36021 539 aa6.09□□□□□ -1.43
NEK4-205ENST00000493199 KRT85P78386 507 aa6.09□□□□□ -1.43
NEK4-205ENST00000493199 NONOQ15233 471 aaKnown RBP eCLIP6.09□□□□□ -1.43
NEK4-205ENST00000493199 NTRK3Q16288 839 aa6.09□□□□□ -1.43
NEK4-205ENST00000493199 GNPTABQ3T906 1256 aa6.09□□□□□ -1.43
NEK4-205ENST00000493199 USH1GQ495M9 461 aa6.09□□□□□ -1.43
NEK4-205ENST00000493199 WDR78Q5VTH9 848 aa6.09□□□□□ -1.43
NEK4-205ENST00000493199 KRT40Q6A162 431 aa6.09□□□□□ -1.43
NEK4-205ENST00000493199 SNRNP48Q6IEG0 339 aaKnown RBP6.09□□□□□ -1.43
NEK4-205ENST00000493199 CCDC174Q6PII3 467 aa6.09□□□□□ -1.43
NEK4-205ENST00000493199 KCNV1Q6PIU1 500 aa6.09□□□□□ -1.43
NEK4-205ENST00000493199 RNF207Q6ZRF8 634 aa6.09□□□□□ -1.43
NEK4-205ENST00000493199 NCAPG2Q86XI2 1143 aa6.09□□□□□ -1.43
NEK4-205ENST00000493199 SIAH1Q8IUQ4 282 aa6.09□□□□□ -1.43
NEK4-205ENST00000493199 CDAN1Q8IWY9 1227 aa6.09□□□□□ -1.43
NEK4-205ENST00000493199 TRMT44Q8IYL2 757 aaKnown RBP6.09□□□□□ -1.43
NEK4-205ENST00000493199 STAG2Q8N3U4 1231 aa6.09□□□□□ -1.43
NEK4-205ENST00000493199 DNERQ8NFT8 737 aa6.09□□□□□ -1.43
NEK4-205ENST00000493199 TNPO1Q92973 898 aaKnown RBP6.09□□□□□ -1.43
NEK4-205ENST00000493199 CDHR1Q96JP9 859 aa6.09□□□□□ -1.43
NEK4-205ENST00000493199 CLMNQ96JQ2 1002 aa6.09□□□□□ -1.43
NEK4-205ENST00000493199 CAPNS2Q96L46 248 aa6.09□□□□□ -1.43
NEK4-205ENST00000493199 TRERF1Q96PN7 1200 aa6.09□□□□□ -1.43
NEK4-205ENST00000493199 PYM1Q9BRP8 204 aaKnown RBP6.09□□□□□ -1.43
NEK4-205ENST00000493199 ZMYND12Q9H0C1 365 aa6.09□□□□□ -1.43
NEK4-205ENST00000493199 ASCC2Q9H1I8 757 aaPredicted RBP6.09□□□□□ -1.43
NEK4-205ENST00000493199 SLC38A10Q9HBR0 1119 aa6.09□□□□□ -1.43
NEK4-205ENST00000493199 FOXD4L1Q9NU39 408 aa6.09□□□□□ -1.43
NEK4-205ENST00000493199 HPS5Q9UPZ3 1129 aa6.09□□□□□ -1.43
NEK4-205ENST00000493199 MYH4Q9Y623 1939 aa6.09□□□□□ -1.44
NEK4-205ENST00000493199 THSD7BQ9C0I4 1608 aa6.08□□□□□ -1.44
NEK4-205ENST00000493199 LAD1O00515 517 aa6.08□□□□□ -1.44
NEK4-205ENST00000493199 TLR2O60603 784 aa6.08□□□□□ -1.44
NEK4-205ENST00000493199 CFBP00751 764 aa6.08□□□□□ -1.44
NEK4-205ENST00000493199 HOXC6P09630 235 aa6.08□□□□□ -1.44
NEK4-205ENST00000493199 TXLNAP40222 546 aa6.08□□□□□ -1.44
NEK4-205ENST00000493199 RGS19P49795 217 aa6.08□□□□□ -1.44
NEK4-205ENST00000493199 USP11P51784 963 aa6.08□□□□□ -1.44
NEK4-205ENST00000493199 PRMT2P55345 433 aa6.08□□□□□ -1.44
NEK4-205ENST00000493199 KIF23Q02241 960 aaPredicted RBP6.08□□□□□ -1.44
NEK4-205ENST00000493199 RRP1BQ14684 758 aaKnown RBP6.08□□□□□ -1.44
NEK4-205ENST00000493199 FAM110CQ1W6H9 321 aa6.08□□□□□ -1.44
NEK4-205ENST00000493199 TMEM266Q2M3C6 531 aa6.08□□□□□ -1.44
NEK4-205ENST00000493199 QRICH1Q2TAL8 776 aa6.08□□□□□ -1.44
NEK4-205ENST00000493199 ARHGEF16Q5VV41 709 aa6.08□□□□□ -1.44
NEK4-205ENST00000493199 MOB2Q70IA6 237 aa6.08□□□□□ -1.44
NEK4-205ENST00000493199 DPP9Q86TI2 863 aa6.08□□□□□ -1.44
NEK4-205ENST00000493199 NLRX1Q86UT6 975 aa6.08□□□□□ -1.44
NEK4-205ENST00000493199 RAB11FIP4Q86YS3 637 aa6.08□□□□□ -1.44
NEK4-205ENST00000493199 RASAL3Q86YV0 1011 aa6.08□□□□□ -1.44
NEK4-205ENST00000493199 IFNL1Q8IU54 200 aa6.08□□□□□ -1.44
NEK4-205ENST00000493199 RIOX2Q8IUF8 465 aa6.08□□□□□ -1.44
NEK4-205ENST00000493199 NOSTRINQ8IVI9 506 aa6.08□□□□□ -1.44
NEK4-205ENST00000493199 DIS3L2Q8IYB7 885 aaKnown RBP6.08□□□□□ -1.44
NEK4-205ENST00000493199 ABRAQ8N0Z2 381 aa6.08□□□□□ -1.44
NEK4-205ENST00000493199 DAGLBQ8NCG7 672 aa6.08□□□□□ -1.44
NEK4-205ENST00000493199 GIMAP8Q8ND71 665 aaPredicted RBP6.08□□□□□ -1.44
NEK4-205ENST00000493199 NSUN6Q8TEA1 469 aaKnown RBP6.08□□□□□ -1.44
NEK4-205ENST00000493199 PIBF1Q8WXW3 757 aa6.08□□□□□ -1.44
NEK4-205ENST00000493199 ABHD8Q96I13 439 aa6.08□□□□□ -1.44
NEK4-205ENST00000493199 IWS1Q96ST2 819 aa6.08□□□□□ -1.44
NEK4-205ENST00000493199 NUP88Q99567 741 aaPredicted RBP6.08□□□□□ -1.44
NEK4-205ENST00000493199 P2RX7Q99572 595 aaKnown RBP6.08□□□□□ -1.44
NEK4-205ENST00000493199 PAGR1Q9BTK6 254 aa6.08□□□□□ -1.44
NEK4-205ENST00000493199 SPATC1LQ9H0A9 340 aa6.08□□□□□ -1.44
NEK4-205ENST00000493199 RIC8AQ9NPQ8 531 aa6.08□□□□□ -1.44
NEK4-205ENST00000493199 GPHNQ9NQX3 736 aaPredicted RBP6.08□□□□□ -1.44
NEK4-205ENST00000493199 HOOK1Q9UJC3 728 aaKnown RBP6.08□□□□□ -1.44
NEK4-205ENST00000493199 TACC3Q9Y6A5 838 aa6.08□□□□□ -1.44
NEK4-205ENST00000493199 ATAD5Q96QE3 1844 aa6.08□□□□□ -1.44
NEK4-205ENST00000493199 CNTNAP5Q8WYK1 1306 aa6.07□□□□□ -1.44
NEK4-205ENST00000493199 PDE4DIPQ5VU43 2346 aa6.07□□□□□ -1.44
NEK4-205ENST00000493199 ASB14A6NK59 587 aa6.07□□□□□ -1.44
NEK4-205ENST00000493199 SPDYE16A6NNV3 312 aaPredicted RBP6.07□□□□□ -1.44
NEK4-205ENST00000493199 BTBD19C9JJ37 291 aa6.07□□□□□ -1.44
NEK4-205ENST00000493199 POTEB2H3BUK9 544 aa6.07□□□□□ -1.44
NEK4-205ENST00000493199 SMIM22K7EJ46 135 aa6.07□□□□□ -1.44
NEK4-205ENST00000493199 PIK3CDO00329 1044 aa6.07□□□□□ -1.44
NEK4-205ENST00000493199 DKC1O60832 514 aaKnown RBP eCLIP6.07□□□□□ -1.44
NEK4-205ENST00000493199 F13A1P00488 732 aa6.07□□□□□ -1.44
NEK4-205ENST00000493199 KCNA4P22459 653 aa6.07□□□□□ -1.44
NEK4-205ENST00000493199 FCGRTP55899 365 aa6.07□□□□□ -1.44
NEK4-205ENST00000493199 ERVK-9P63128 1117 aa6.07□□□□□ -1.44
NEK4-205ENST00000493199 ERVK-24P63145 666 aa6.07□□□□□ -1.44
NEK4-205ENST00000493199 SETQ01105 290 aaPredicted RBP6.07□□□□□ -1.44
NEK4-205ENST00000493199 EVX2Q03828 476 aa6.07□□□□□ -1.44
NEK4-205ENST00000493199 MKRN3Q13064 507 aaKnown RBP6.07□□□□□ -1.44
NEK4-205ENST00000493199 SKOR2Q2VWA4 1001 aaPredicted RBP6.07□□□□□ -1.44
NEK4-205ENST00000493199 BRDTQ58F21 947 aaPredicted RBP6.07□□□□□ -1.44
NEK4-205ENST00000493199 TTBK2Q6IQ55 1244 aa6.07□□□□□ -1.44
NEK4-205ENST00000493199 CYP4F22Q6NT55 531 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms