RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 IGHDP01880 384 aa14.65□□□□□ -0.06
COL6A1-205ENST00000492851 MRPL12P52815 198 aaKnown RBP14.65□□□□□ -0.06
COL6A1-205ENST00000492851 CNTN2Q02246 1040 aa14.65□□□□□ -0.06
COL6A1-205ENST00000492851 GPATCH4Q5T3I0 446 aaKnown RBP14.65□□□□□ -0.06
COL6A1-205ENST00000492851 SYDE2Q5VT97 1194 aa14.65□□□□□ -0.06
COL6A1-205ENST00000492851 NOL8Q76FK4 1167 aaKnown RBP14.65□□□□□ -0.06
COL6A1-205ENST00000492851 ZNF589Q86UQ0 364 aaPredicted RBP14.65□□□□□ -0.06
COL6A1-205ENST00000492851 IQCA1Q86XH1 822 aa14.65□□□□□ -0.06
COL6A1-205ENST00000492851 FGD4Q96M96 766 aa14.65□□□□□ -0.06
COL6A1-205ENST00000492851 MAF1Q9H063 256 aa14.65□□□□□ -0.06
COL6A1-205ENST00000492851 AP5M1Q9H0R1 490 aa14.65□□□□□ -0.06
COL6A1-205ENST00000492851 CYP39A1Q9NYL5 469 aa14.65□□□□□ -0.06
COL6A1-205ENST00000492851 MTMR7Q9Y216 660 aa14.65□□□□□ -0.06
COL6A1-205ENST00000492851 STXBP5LQ9Y2K9 1186 aa14.65□□□□□ -0.06
COL6A1-205ENST00000492851 TRIM43BA6NCK2 446 aa14.64□□□□□ -0.07
COL6A1-205ENST00000492851 SOWAHBA6NEL2 793 aa14.64□□□□□ -0.07
COL6A1-205ENST00000492851 ASGR1P07306 291 aa14.64□□□□□ -0.07
COL6A1-205ENST00000492851 HAND2P61296 217 aa14.64□□□□□ -0.07
COL6A1-205ENST00000492851 CWC27Q6UX04 472 aaKnown RBP14.64□□□□□ -0.07
COL6A1-205ENST00000492851 TRIM43Q96BQ3 446 aaPredicted RBP14.64□□□□□ -0.07
COL6A1-205ENST00000492851 CHMP4CQ96CF2 233 aa14.64□□□□□ -0.07
COL6A1-205ENST00000492851 KATNBL1Q9H079 304 aa14.64□□□□□ -0.07
COL6A1-205ENST00000492851 MTMR10Q9NXD2 777 aa14.64□□□□□ -0.07
COL6A1-205ENST00000492851 PLXNA1Q9UIW2 1896 aa14.63□□□□□ -0.07
COL6A1-205ENST00000492851 A0A0U1RQG5 324 aaPredicted RBP14.63□□□□□ -0.07
COL6A1-205ENST00000492851 TLR3O15455 904 aaKnown RBP14.63□□□□□ -0.07
COL6A1-205ENST00000492851 PDHBP11177 359 aa14.63□□□□□ -0.07
COL6A1-205ENST00000492851 CDK7P50613 346 aa14.63□□□□□ -0.07
COL6A1-205ENST00000492851 FAAP100Q0VG06 881 aa14.63□□□□□ -0.07
COL6A1-205ENST00000492851 SHHQ15465 462 aa14.63□□□□□ -0.07
COL6A1-205ENST00000492851 IMMTQ16891 758 aaKnown RBP14.63□□□□□ -0.07
COL6A1-205ENST00000492851 NSMFQ6X4W1 530 aa14.63□□□□□ -0.07
COL6A1-205ENST00000492851 SH3RF1Q7Z6J0 888 aa14.63□□□□□ -0.07
COL6A1-205ENST00000492851 SLC17A8Q8NDX2 589 aa14.63□□□□□ -0.07
COL6A1-205ENST00000492851 EXOC6Q8TAG9 804 aa14.63□□□□□ -0.07
COL6A1-205ENST00000492851 LENG1Q96BZ8 264 aaPredicted RBP14.63□□□□□ -0.07
COL6A1-205ENST00000492851 DSCC1Q9BVC3 393 aa14.63□□□□□ -0.07
COL6A1-205ENST00000492851 VTA1Q9NP79 307 aa14.63□□□□□ -0.07
COL6A1-205ENST00000492851 GPCPD1Q9NPB8 672 aa14.63□□□□□ -0.07
COL6A1-205ENST00000492851 ARVCFO00192 962 aa14.62□□□□□ -0.07
COL6A1-205ENST00000492851 TIMP1P01033 207 aa14.62□□□□□ -0.07
COL6A1-205ENST00000492851 SNHG28P0DPA3 235 aa14.62□□□□□ -0.07
COL6A1-205ENST00000492851 SLC16A2P36021 539 aa14.62□□□□□ -0.07
COL6A1-205ENST00000492851 SMAD3P84022 425 aaKnown RBP14.62□□□□□ -0.07
COL6A1-205ENST00000492851 FPGSQ05932 587 aa14.62□□□□□ -0.07
COL6A1-205ENST00000492851 ZNF543Q08ER8 600 aa14.62□□□□□ -0.07
COL6A1-205ENST00000492851 MUM1L1Q5H9M0 696 aa14.62□□□□□ -0.07
COL6A1-205ENST00000492851 TTBK2Q6IQ55 1244 aa14.62□□□□□ -0.07
COL6A1-205ENST00000492851 MORC4Q8TE76 937 aa14.62□□□□□ -0.07
COL6A1-205ENST00000492851 ANKS1AQ92625 1134 aa14.62□□□□□ -0.07
COL6A1-205ENST00000492851 WDR19Q8NEZ3 1342 aa14.62□□□□□ -0.07
COL6A1-205ENST00000492851 SNAP25P60880 206 aa14.61□□□□□ -0.07
COL6A1-205ENST00000492851 BAATQ14032 418 aaPredicted RBP14.61□□□□□ -0.07
COL6A1-205ENST00000492851 ZNF697Q5TEC3 545 aa14.61□□□□□ -0.07
COL6A1-205ENST00000492851 Q7L0L9 218 aa14.61□□□□□ -0.07
COL6A1-205ENST00000492851 RGS22Q8NE09 1264 aa14.61□□□□□ -0.07
COL6A1-205ENST00000492851 KRT23Q9C075 422 aa14.61□□□□□ -0.07
COL6A1-205ENST00000492851 KAT14Q9H8E8 782 aa14.61□□□□□ -0.07
COL6A1-205ENST00000492851 CNNM2Q9H8M5 875 aa14.61□□□□□ -0.07
COL6A1-205ENST00000492851 GNEQ9Y223 722 aaKnown RBP14.61□□□□□ -0.07
COL6A1-205ENST00000492851 FRMPD2Q68DX3 1309 aaPredicted RBP14.61□□□□□ -0.07
COL6A1-205ENST00000492851 PTPDC1A2A3K4 754 aa14.6□□□□□ -0.07
COL6A1-205ENST00000492851 MYADML2A6NDP7 307 aa14.6□□□□□ -0.07
COL6A1-205ENST00000492851 DYNC1LI2O43237 492 aaPredicted RBP14.6□□□□□ -0.07
COL6A1-205ENST00000492851 FSCN1Q16658 493 aaKnown RBP14.6□□□□□ -0.07
COL6A1-205ENST00000492851 BRDTQ58F21 947 aaPredicted RBP14.6□□□□□ -0.07
COL6A1-205ENST00000492851 MFSD5Q6N075 450 aa14.6□□□□□ -0.07
COL6A1-205ENST00000492851 TAPT1Q6NXT6 567 aa14.6□□□□□ -0.07
COL6A1-205ENST00000492851 RNF207Q6ZRF8 634 aa14.6□□□□□ -0.07
COL6A1-205ENST00000492851 KIAA1211Q6ZU35 1233 aa14.6□□□□□ -0.07
COL6A1-205ENST00000492851 TLK2Q86UE8 772 aa14.6□□□□□ -0.07
COL6A1-205ENST00000492851 TBC1D10CQ8IV04 446 aa14.6□□□□□ -0.07
COL6A1-205ENST00000492851 TMEM199Q8N511 208 aa14.6□□□□□ -0.07
COL6A1-205ENST00000492851 DNERQ8NFT8 737 aa14.6□□□□□ -0.07
COL6A1-205ENST00000492851 TBX21Q9UL17 535 aa14.6□□□□□ -0.07
COL6A1-205ENST00000492851 DNAH12Q6ZR08 3092 aa14.6□□□□□ -0.07
COL6A1-205ENST00000492851 ADCY6O43306 1168 aa14.59□□□□□ -0.07
COL6A1-205ENST00000492851 KDM4AO75164 1064 aa14.59□□□□□ -0.07
COL6A1-205ENST00000492851 SMPD1P17405 629 aa14.59□□□□□ -0.07
COL6A1-205ENST00000492851 ALDH5A1P51649 535 aaPredicted RBP14.59□□□□□ -0.07
COL6A1-205ENST00000492851 PPIGQ13427 754 aaKnown RBP eCLIP14.59□□□□□ -0.07
COL6A1-205ENST00000492851 DUSP28Q4G0W2 176 aa14.59□□□□□ -0.07
COL6A1-205ENST00000492851 C9orf50Q5SZB4 431 aa14.59□□□□□ -0.07
COL6A1-205ENST00000492851 PNMA1Q8ND90 353 aa14.59□□□□□ -0.07
COL6A1-205ENST00000492851 RUFY2Q8WXA3 655 aa14.59□□□□□ -0.07
COL6A1-205ENST00000492851 RNPC3Q96LT9 517 aaKnown RBP14.59□□□□□ -0.07
COL6A1-205ENST00000492851 ZSCAN10Q96SZ4 725 aaPredicted RBP14.59□□□□□ -0.07
COL6A1-205ENST00000492851 LAMA3Q16787 3333 aa14.58□□□□□ -0.07
COL6A1-205ENST00000492851 SMCHD1A6NHR9 2005 aa14.58□□□□□ -0.08
COL6A1-205ENST00000492851 TMEM265A0A087WTH1 108 aa14.58□□□□□ -0.08
COL6A1-205ENST00000492851 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.58□□□□□ -0.08
COL6A1-205ENST00000492851 NFIBO00712 420 aa14.58□□□□□ -0.08
COL6A1-205ENST00000492851 NKRFO15226 690 aaKnown RBP eCLIP14.58□□□□□ -0.08
COL6A1-205ENST00000492851 CTAGE5O15320 804 aa14.58□□□□□ -0.08
COL6A1-205ENST00000492851 ITGB8P26012 769 aa14.58□□□□□ -0.08
COL6A1-205ENST00000492851 CPT1AP50416 773 aa14.58□□□□□ -0.08
COL6A1-205ENST00000492851 ASPRV1Q53RT3 343 aa14.58□□□□□ -0.08
COL6A1-205ENST00000492851 EEPD1Q7L9B9 569 aa14.58□□□□□ -0.08
COL6A1-205ENST00000492851 MCF2L2Q86YR7 1114 aa14.58□□□□□ -0.08
COL6A1-205ENST00000492851 FAM126BQ8IXS8 530 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms