RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 STARD7Q9NQZ5 370 aa20.31■□□□□ 0.84
SGMS1-204ENST00000492601 CYP39A1Q9NYL5 469 aa20.31■□□□□ 0.84
SGMS1-204ENST00000492601 ASTN1O14525 1302 aa20.3■□□□□ 0.84
SGMS1-204ENST00000492601 ASB14A6NK59 587 aa20.3■□□□□ 0.84
SGMS1-204ENST00000492601 CLTBP09497 229 aa20.3■□□□□ 0.84
SGMS1-204ENST00000492601 PDHBP11177 359 aa20.3■□□□□ 0.84
SGMS1-204ENST00000492601 IRX6P78412 446 aaPredicted RBP20.3■□□□□ 0.84
SGMS1-204ENST00000492601 CCSAPQ6IQ19 270 aaPredicted RBP20.3■□□□□ 0.84
SGMS1-204ENST00000492601 GPR153Q6NV75 609 aa20.3■□□□□ 0.84
SGMS1-204ENST00000492601 DEFB123Q8N688 67 aa20.3■□□□□ 0.84
SGMS1-204ENST00000492601 NUP133Q8WUM0 1156 aa20.3■□□□□ 0.84
SGMS1-204ENST00000492601 ESR2Q92731 530 aa20.3■□□□□ 0.84
SGMS1-204ENST00000492601 PURBQ96QR8 312 aaKnown RBP20.3■□□□□ 0.84
SGMS1-204ENST00000492601 SPC25Q9HBM1 224 aa20.3■□□□□ 0.84
SGMS1-204ENST00000492601 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.29■□□□□ 0.84
SGMS1-204ENST00000492601 MOXD2PA6NHM9 499 aa20.29■□□□□ 0.84
SGMS1-204ENST00000492601 HIP1O00291 1037 aa20.29■□□□□ 0.84
SGMS1-204ENST00000492601 NOL8Q76FK4 1167 aaKnown RBP20.29■□□□□ 0.84
SGMS1-204ENST00000492601 TTC14Q96N46 770 aa20.29■□□□□ 0.84
SGMS1-204ENST00000492601 UPF3AQ9H1J1 476 aaKnown RBP20.29■□□□□ 0.84
SGMS1-204ENST00000492601 KDM4AO75164 1064 aa20.28■□□□□ 0.84
SGMS1-204ENST00000492601 ASGR1P07306 291 aa20.28■□□□□ 0.84
SGMS1-204ENST00000492601 ITGB8P26012 769 aa20.28■□□□□ 0.84
SGMS1-204ENST00000492601 PDE4AP27815 886 aa20.28■□□□□ 0.84
SGMS1-204ENST00000492601 CST5P28325 142 aaPredicted RBP20.28■□□□□ 0.84
SGMS1-204ENST00000492601 GJA9P57773 515 aa20.28■□□□□ 0.84
SGMS1-204ENST00000492601 TNFAIP2Q03169 654 aa20.28■□□□□ 0.84
SGMS1-204ENST00000492601 ZNF543Q08ER8 600 aa20.28■□□□□ 0.84
SGMS1-204ENST00000492601 SHHQ15465 462 aa20.28■□□□□ 0.84
SGMS1-204ENST00000492601 GNASQ5JWF2 1037 aa20.28■□□□□ 0.84
SGMS1-204ENST00000492601 EEPD1Q7L9B9 569 aa20.28■□□□□ 0.84
SGMS1-204ENST00000492601 PCSK9Q8NBP7 692 aaKnown RBP20.28■□□□□ 0.84
SGMS1-204ENST00000492601 VTI1AQ96AJ9 217 aa20.28■□□□□ 0.84
SGMS1-204ENST00000492601 NFIBO00712 420 aa20.27■□□□□ 0.84
SGMS1-204ENST00000492601 PTGS1P23219 599 aa20.27■□□□□ 0.84
SGMS1-204ENST00000492601 BEX3Q00994 111 aa20.27■□□□□ 0.84
SGMS1-204ENST00000492601 BAATQ14032 418 aaPredicted RBP20.27■□□□□ 0.84
SGMS1-204ENST00000492601 C9orf50Q5SZB4 431 aa20.27■□□□□ 0.84
SGMS1-204ENST00000492601 FBXO16Q8IX29 292 aaPredicted RBP20.27■□□□□ 0.84
SGMS1-204ENST00000492601 GLT1D1Q96MS3 346 aa20.27■□□□□ 0.84
SGMS1-204ENST00000492601 TMEM39AQ9NV64 488 aa20.27■□□□□ 0.84
SGMS1-204ENST00000492601 PTPDC1A2A3K4 754 aa20.26■□□□□ 0.83
SGMS1-204ENST00000492601 DCDC2CA8MYV0 355 aa20.26■□□□□ 0.83
SGMS1-204ENST00000492601 B4E1Z4 1266 aa20.26■□□□□ 0.83
SGMS1-204ENST00000492601 CTAGE5O15320 804 aa20.26■□□□□ 0.83
SGMS1-204ENST00000492601 GOLGA8HP0CJ92 632 aa20.26■□□□□ 0.83
SGMS1-204ENST00000492601 SNHG28P0DPA3 235 aa20.26■□□□□ 0.83
SGMS1-204ENST00000492601 FAAP100Q0VG06 881 aa20.26■□□□□ 0.83
SGMS1-204ENST00000492601 DSCC1Q9BVC3 393 aa20.26■□□□□ 0.83
SGMS1-204ENST00000492601 IL25Q9H293 177 aa20.26■□□□□ 0.83
SGMS1-204ENST00000492601 CPVLQ9H3G5 476 aa20.26■□□□□ 0.83
SGMS1-204ENST00000492601 PDGFCQ9NRA1 345 aa20.26■□□□□ 0.83
SGMS1-204ENST00000492601 KIAA0355O15063 1070 aa20.25■□□□□ 0.83
SGMS1-204ENST00000492601 RAG1P15918 1043 aa20.25■□□□□ 0.83
SGMS1-204ENST00000492601 IMMTQ16891 758 aaKnown RBP20.25■□□□□ 0.83
SGMS1-204ENST00000492601 ANKRD33Q7Z3H0 272 aa20.25■□□□□ 0.83
SGMS1-204ENST00000492601 IQCA1Q86XH1 822 aa20.25■□□□□ 0.83
SGMS1-204ENST00000492601 DGKHQ86XP1 1220 aa20.25■□□□□ 0.83
SGMS1-204ENST00000492601 TOX2Q96NM4 488 aa20.25■□□□□ 0.83
SGMS1-204ENST00000492601 BAZ2BQ9UIF8 2168 aaKnown RBP20.25■□□□□ 0.83
SGMS1-204ENST00000492601 ELP1O95163 1332 aa20.25■□□□□ 0.83
SGMS1-204ENST00000492601 GSPT1P15170 499 aaKnown RBP20.24■□□□□ 0.83
SGMS1-204ENST00000492601 SMPD1P17405 629 aa20.24■□□□□ 0.83
SGMS1-204ENST00000492601 CALML3P27482 149 aa20.24■□□□□ 0.83
SGMS1-204ENST00000492601 TMEM63BQ5T3F8 832 aa20.24■□□□□ 0.83
SGMS1-204ENST00000492601 TTC22Q5TAA0 569 aa20.24■□□□□ 0.83
SGMS1-204ENST00000492601 TAPT1Q6NXT6 567 aa20.24■□□□□ 0.83
SGMS1-204ENST00000492601 SLC30A10Q6XR72 485 aa20.24■□□□□ 0.83
SGMS1-204ENST00000492601 TLK2Q86UE8 772 aa20.24■□□□□ 0.83
SGMS1-204ENST00000492601 PNMA1Q8ND90 353 aa20.24■□□□□ 0.83
SGMS1-204ENST00000492601 UBA5Q9GZZ9 404 aa20.24■□□□□ 0.83
SGMS1-204ENST00000492601 KAT14Q9H8E8 782 aa20.24■□□□□ 0.83
SGMS1-204ENST00000492601 CTNNA3Q9UI47 895 aa20.24■□□□□ 0.83
SGMS1-204ENST00000492601 GNEQ9Y223 722 aaKnown RBP20.24■□□□□ 0.83
SGMS1-204ENST00000492601 A0A0U1RQG5 324 aaPredicted RBP20.23■□□□□ 0.83
SGMS1-204ENST00000492601 DYNC1LI2O43237 492 aaPredicted RBP20.23■□□□□ 0.83
SGMS1-204ENST00000492601 ALDH5A1P51649 535 aaPredicted RBP20.23■□□□□ 0.83
SGMS1-204ENST00000492601 CCDC178Q5BJE1 867 aa20.23■□□□□ 0.83
SGMS1-204ENST00000492601 CLEC4DQ8WXI8 215 aa20.23■□□□□ 0.83
SGMS1-204ENST00000492601 ZSCAN10Q96SZ4 725 aaPredicted RBP20.23■□□□□ 0.83
SGMS1-204ENST00000492601 AP5M1Q9H0R1 490 aa20.23■□□□□ 0.83
SGMS1-204ENST00000492601 MTMR10Q9NXD2 777 aa20.23■□□□□ 0.83
SGMS1-204ENST00000492601 ZSWIM5Q9P217 1185 aa20.23■□□□□ 0.83
SGMS1-204ENST00000492601 ADD3Q9UEY8 706 aaKnown RBP20.23■□□□□ 0.83
SGMS1-204ENST00000492601 ARVCFO00192 962 aa20.22■□□□□ 0.83
SGMS1-204ENST00000492601 CDK7P50613 346 aa20.22■□□□□ 0.83
SGMS1-204ENST00000492601 EPHB4P54760 987 aa20.22■□□□□ 0.83
SGMS1-204ENST00000492601 FSCN1Q16658 493 aaKnown RBP20.22■□□□□ 0.83
SGMS1-204ENST00000492601 USH1GQ495M9 461 aa20.22■□□□□ 0.83
SGMS1-204ENST00000492601 GPATCH4Q5T3I0 446 aaKnown RBP20.22■□□□□ 0.83
SGMS1-204ENST00000492601 IQSEC1Q6DN90 963 aa20.22■□□□□ 0.83
SGMS1-204ENST00000492601 CXCL17Q6UXB2 119 aa20.22■□□□□ 0.83
SGMS1-204ENST00000492601 RNF207Q6ZRF8 634 aa20.22■□□□□ 0.83
SGMS1-204ENST00000492601 KIAA1211Q6ZU35 1233 aa20.22■□□□□ 0.83
SGMS1-204ENST00000492601 ENAHQ8N8S7 591 aaPredicted RBP20.22■□□□□ 0.83
SGMS1-204ENST00000492601 VTA1Q9NP79 307 aa20.22■□□□□ 0.83
SGMS1-204ENST00000492601 MYO9BQ13459 2157 aa20.22■□□□□ 0.83
SGMS1-204ENST00000492601 MROH7Q68CQ1 1323 aa20.22■□□□□ 0.83
SGMS1-204ENST00000492601 KIAA1217Q5T5P2 1943 aa20.21■□□□□ 0.83
SGMS1-204ENST00000492601 NKX3-2P78367 333 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms