RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 CD44P16070 742 aaKnown RBP10.73□□□□□ -0.69
VPS8-225ENST00000492449 TPP2P29144 1249 aaPredicted RBP10.73□□□□□ -0.69
VPS8-225ENST00000492449 COPB1P53618 953 aaKnown RBP10.73□□□□□ -0.69
VPS8-225ENST00000492449 MXRA7P84157 204 aa10.73□□□□□ -0.69
VPS8-225ENST00000492449 PABPC1LQ4VXU2 614 aaKnown RBP10.73□□□□□ -0.69
VPS8-225ENST00000492449 ANO7Q6IWH7 933 aa10.73□□□□□ -0.69
VPS8-225ENST00000492449 RUFY4Q6ZNE9 571 aa10.73□□□□□ -0.69
VPS8-225ENST00000492449 PIGWQ7Z7B1 504 aa10.73□□□□□ -0.69
VPS8-225ENST00000492449 SESTD1Q86VW0 696 aa10.73□□□□□ -0.69
VPS8-225ENST00000492449 IFT43Q96FT9 208 aa10.73□□□□□ -0.69
VPS8-225ENST00000492449 CNOT10Q9H9A5 744 aaKnown RBP10.73□□□□□ -0.69
VPS8-225ENST00000492449 CAPN11Q9UMQ6 739 aa10.73□□□□□ -0.69
VPS8-225ENST00000492449 PLAAQ9Y263 795 aa10.73□□□□□ -0.69
VPS8-225ENST00000492449 HYOU1Q9Y4L1 999 aa10.73□□□□□ -0.69
VPS8-225ENST00000492449 RAPGEF3O95398 923 aa10.72□□□□□ -0.69
VPS8-225ENST00000492449 PTPREP23469 700 aa10.72□□□□□ -0.69
VPS8-225ENST00000492449 TAF7Q15545 349 aaPredicted RBP10.72□□□□□ -0.69
VPS8-225ENST00000492449 CHMP6Q96FZ7 201 aa10.72□□□□□ -0.69
VPS8-225ENST00000492449 TRIM4Q9C037 500 aa10.72□□□□□ -0.69
VPS8-225ENST00000492449 LACRTQ9GZZ8 138 aa10.72□□□□□ -0.69
VPS8-225ENST00000492449 UTYO14607 1347 aa10.72□□□□□ -0.69
VPS8-225ENST00000492449 RCCD1A6NED2 376 aa10.72□□□□□ -0.69
VPS8-225ENST00000492449 FOXO3O43524 673 aa10.72□□□□□ -0.69
VPS8-225ENST00000492449 FLOT1O75955 427 aa10.72□□□□□ -0.69
VPS8-225ENST00000492449 HOXB7P09629 217 aa10.72□□□□□ -0.69
VPS8-225ENST00000492449 CDC25AP30304 524 aa10.72□□□□□ -0.69
VPS8-225ENST00000492449 CARSP49589 748 aaKnown RBP10.72□□□□□ -0.69
VPS8-225ENST00000492449 ZNF131P52739 623 aa10.72□□□□□ -0.69
VPS8-225ENST00000492449 CDK17Q00537 523 aa10.72□□□□□ -0.69
VPS8-225ENST00000492449 CCDC178Q5BJE1 867 aa10.72□□□□□ -0.69
VPS8-225ENST00000492449 SH3RF1Q7Z6J0 888 aa10.72□□□□□ -0.69
VPS8-225ENST00000492449 PNMA8AQ86V59 439 aaPredicted RBP10.72□□□□□ -0.69
VPS8-225ENST00000492449 STK11IPQ8N1F8 1099 aa10.72□□□□□ -0.69
VPS8-225ENST00000492449 SEC31BQ9NQW1 1179 aa10.72□□□□□ -0.69
VPS8-225ENST00000492449 HELLSQ9NRZ9 838 aa10.72□□□□□ -0.69
VPS8-225ENST00000492449 PCMTD2Q9NV79 361 aa10.72□□□□□ -0.69
VPS8-225ENST00000492449 DNAAF2Q9NVR5 837 aaKnown RBP10.72□□□□□ -0.69
VPS8-225ENST00000492449 FBXO2Q9UK22 296 aaPredicted RBP10.72□□□□□ -0.69
VPS8-225ENST00000492449 NFU1Q9UMS0 254 aa10.72□□□□□ -0.69
VPS8-225ENST00000492449 WDR19Q8NEZ3 1342 aa10.72□□□□□ -0.69
VPS8-225ENST00000492449 POLR2DO15514 142 aaKnown RBP10.71□□□□□ -0.69
VPS8-225ENST00000492449 KIF4AO95239 1232 aa10.71□□□□□ -0.69
VPS8-225ENST00000492449 BAG3O95817 575 aa10.71□□□□□ -0.69
VPS8-225ENST00000492449 PIP4K2AP48426 406 aaPredicted RBP10.71□□□□□ -0.69
VPS8-225ENST00000492449 USP4Q13107 963 aa10.71□□□□□ -0.69
VPS8-225ENST00000492449 ADAM9Q13443 819 aa10.71□□□□□ -0.69
VPS8-225ENST00000492449 MYBPC3Q14896 1274 aa10.71□□□□□ -0.69
VPS8-225ENST00000492449 TTF1Q15361 905 aaPredicted RBP10.71□□□□□ -0.69
VPS8-225ENST00000492449 TAF11Q15544 211 aa10.71□□□□□ -0.69
VPS8-225ENST00000492449 ERMARDQ5T6L9 678 aa10.71□□□□□ -0.69
VPS8-225ENST00000492449 ACBD5Q5T8D3 534 aaPredicted RBP10.71□□□□□ -0.69
VPS8-225ENST00000492449 HDGFL1Q5TGJ6 251 aa10.71□□□□□ -0.69
VPS8-225ENST00000492449 CPLX4Q7Z7G2 160 aa10.71□□□□□ -0.69
VPS8-225ENST00000492449 MYLK4Q86YV6 388 aaPredicted RBP10.71□□□□□ -0.69
VPS8-225ENST00000492449 CNBD1Q8NA66 436 aa10.71□□□□□ -0.69
VPS8-225ENST00000492449 ZNF317Q96PQ6 595 aaPredicted RBP10.71□□□□□ -0.69
VPS8-225ENST00000492449 MMADHCQ9H3L0 296 aaPredicted RBP10.71□□□□□ -0.69
VPS8-225ENST00000492449 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.71□□□□□ -0.69
VPS8-225ENST00000492449 MYH7BA7E2Y1 1941 aa10.71□□□□□ -0.69
VPS8-225ENST00000492449 CREB3O43889 395 aa10.71□□□□□ -0.69
VPS8-225ENST00000492449 ECEL1O95672 775 aa10.71□□□□□ -0.69
VPS8-225ENST00000492449 GLI1P08151 1106 aa10.71□□□□□ -0.69
VPS8-225ENST00000492449 GNAZP19086 355 aa10.71□□□□□ -0.69
VPS8-225ENST00000492449 HPDP32754 393 aaPredicted RBP10.71□□□□□ -0.69
VPS8-225ENST00000492449 PDE6BP35913 854 aa10.71□□□□□ -0.69
VPS8-225ENST00000492449 MAP3K19Q56UN5 1328 aa10.71□□□□□ -0.69
VPS8-225ENST00000492449 TBC1D1Q86TI0 1168 aaPredicted RBP10.71□□□□□ -0.69
VPS8-225ENST00000492449 ERICH1Q86X53 443 aa10.71□□□□□ -0.69
VPS8-225ENST00000492449 LMNTD2Q8IXW0 634 aa10.71□□□□□ -0.69
VPS8-225ENST00000492449 NECTIN2Q92692 538 aa10.71□□□□□ -0.69
VPS8-225ENST00000492449 GSDMAQ96QA5 445 aa10.71□□□□□ -0.69
VPS8-225ENST00000492449 FAM129AQ9BZQ8 928 aa10.71□□□□□ -0.69
VPS8-225ENST00000492449 GMEB1Q9Y692 573 aa10.71□□□□□ -0.69
VPS8-225ENST00000492449 TTC26A0AVF1 554 aa10.71□□□□□ -0.7
VPS8-225ENST00000492449 SPDYE5A6NIY4 337 aa10.71□□□□□ -0.7
VPS8-225ENST00000492449 PRC1O43663 620 aa10.71□□□□□ -0.7
VPS8-225ENST00000492449 TACC1O75410 805 aa10.71□□□□□ -0.7
VPS8-225ENST00000492449 MYBP10242 640 aa10.71□□□□□ -0.7
VPS8-225ENST00000492449 ALDH5A1P51649 535 aaPredicted RBP10.71□□□□□ -0.7
VPS8-225ENST00000492449 IMMTQ16891 758 aaKnown RBP10.71□□□□□ -0.7
VPS8-225ENST00000492449 PIDD1Q9HB75 910 aa10.71□□□□□ -0.7
VPS8-225ENST00000492449 GOPCQ9HD26 462 aa10.71□□□□□ -0.7
VPS8-225ENST00000492449 MYH1P12882 1939 aa10.7□□□□□ -0.7
VPS8-225ENST00000492449 A0A1B0GVG6 124 aa10.7□□□□□ -0.7
VPS8-225ENST00000492449 CYP27B1O15528 508 aa10.7□□□□□ -0.7
VPS8-225ENST00000492449 EVI5O60447 810 aa10.7□□□□□ -0.7
VPS8-225ENST00000492449 ATP2C2O75185 946 aa10.7□□□□□ -0.7
VPS8-225ENST00000492449 ATP6V1C1P21283 382 aa10.7□□□□□ -0.7
VPS8-225ENST00000492449 PAFAH1B1P43034 410 aa10.7□□□□□ -0.7
VPS8-225ENST00000492449 PPARAQ07869 468 aa10.7□□□□□ -0.7
VPS8-225ENST00000492449 MAP3K12Q12852 859 aa10.7□□□□□ -0.7
VPS8-225ENST00000492449 GALNTL6Q49A17 601 aa10.7□□□□□ -0.7
VPS8-225ENST00000492449 TCP11X2Q5H9J9 407 aa10.7□□□□□ -0.7
VPS8-225ENST00000492449 HINFPQ9BQA5 517 aa10.7□□□□□ -0.7
VPS8-225ENST00000492449 GJB4Q9NTQ9 266 aa10.7□□□□□ -0.7
VPS8-225ENST00000492449 CNOT8Q9UFF9 292 aaKnown RBP10.7□□□□□ -0.7
VPS8-225ENST00000492449 LUC7L2Q9Y383 392 aaKnown RBP10.7□□□□□ -0.7
VPS8-225ENST00000492449 MYH10P35580 1976 aa10.7□□□□□ -0.7
VPS8-225ENST00000492449 BHMG1C9JSJ3 638 aaPredicted RBP10.7□□□□□ -0.7
VPS8-225ENST00000492449 CCT6AP40227 531 aaKnown RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms