RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 A1CFQ9NQ94 594 aaKnown RBP10.8□□□□□ -0.68
HDAC3-212ENST00000492407 RNF146Q9NTX7 359 aa10.8□□□□□ -0.68
HDAC3-212ENST00000492407 STX8Q9UNK0 236 aa10.8□□□□□ -0.68
HDAC3-212ENST00000492407 GNEQ9Y223 722 aaKnown RBP10.8□□□□□ -0.68
HDAC3-212ENST00000492407 ZMYM6O95789 1325 aa10.8□□□□□ -0.68
HDAC3-212ENST00000492407 CTAGE5O15320 804 aa10.79□□□□□ -0.68
HDAC3-212ENST00000492407 FOXP2O15409 715 aa10.79□□□□□ -0.68
HDAC3-212ENST00000492407 ICAM1P05362 532 aa10.79□□□□□ -0.68
HDAC3-212ENST00000492407 SLC4A3P48751 1232 aa10.79□□□□□ -0.68
HDAC3-212ENST00000492407 EPHB4P54760 987 aa10.79□□□□□ -0.68
HDAC3-212ENST00000492407 IKQ13123 557 aaPredicted RBP10.79□□□□□ -0.68
HDAC3-212ENST00000492407 RASIP1Q5U651 963 aa10.79□□□□□ -0.68
HDAC3-212ENST00000492407 FAM126BQ8IXS8 530 aa10.79□□□□□ -0.68
HDAC3-212ENST00000492407 LENG1Q96BZ8 264 aaPredicted RBP10.79□□□□□ -0.68
HDAC3-212ENST00000492407 AGBL1Q96MI9 1066 aa10.79□□□□□ -0.68
HDAC3-212ENST00000492407 AP5M1Q9H0R1 490 aa10.79□□□□□ -0.68
HDAC3-212ENST00000492407 TTYH1Q9H313 450 aaPredicted RBP10.79□□□□□ -0.68
HDAC3-212ENST00000492407 VTA1Q9NP79 307 aa10.79□□□□□ -0.68
HDAC3-212ENST00000492407 IL17RBQ9NRM6 502 aa10.79□□□□□ -0.68
HDAC3-212ENST00000492407 CYP39A1Q9NYL5 469 aa10.79□□□□□ -0.68
HDAC3-212ENST00000492407 ADD3Q9UEY8 706 aaKnown RBP10.79□□□□□ -0.68
HDAC3-212ENST00000492407 PRR12Q9ULL5 1215 aa10.79□□□□□ -0.68
HDAC3-212ENST00000492407 ZNFX1Q9P2E3 1918 aaKnown RBP10.79□□□□□ -0.68
HDAC3-212ENST00000492407 COL11A1P12107 1806 aaPredicted RBP10.79□□□□□ -0.68
HDAC3-212ENST00000492407 MYADML2A6NDP7 307 aa10.78□□□□□ -0.68
HDAC3-212ENST00000492407 SOWAHBA6NEL2 793 aa10.78□□□□□ -0.68
HDAC3-212ENST00000492407 CD4P01730 458 aa10.78□□□□□ -0.68
HDAC3-212ENST00000492407 CNTN2Q02246 1040 aa10.78□□□□□ -0.68
HDAC3-212ENST00000492407 MCMDC2Q4G0Z9 681 aa10.78□□□□□ -0.68
HDAC3-212ENST00000492407 PSRC1Q6PGN9 363 aaPredicted RBP10.78□□□□□ -0.68
HDAC3-212ENST00000492407 OTUD7AQ8TE49 926 aaPredicted RBP10.78□□□□□ -0.68
HDAC3-212ENST00000492407 VTI1AQ96AJ9 217 aa10.78□□□□□ -0.68
HDAC3-212ENST00000492407 FAM161BQ96MY7 647 aa10.78□□□□□ -0.68
HDAC3-212ENST00000492407 RANBP17Q9H2T7 1088 aaKnown RBP10.78□□□□□ -0.68
HDAC3-212ENST00000492407 HOMER2Q9NSB8 354 aa10.78□□□□□ -0.68
HDAC3-212ENST00000492407 LAMA2P24043 3122 aaKnown RBP10.78□□□□□ -0.68
HDAC3-212ENST00000492407 PLXNA1Q9UIW2 1896 aa10.77□□□□□ -0.69
HDAC3-212ENST00000492407 ADCY6O43306 1168 aa10.77□□□□□ -0.69
HDAC3-212ENST00000492407 RANBP6O60518 1105 aaKnown RBP10.77□□□□□ -0.69
HDAC3-212ENST00000492407 TOP1P11387 765 aaKnown RBP10.77□□□□□ -0.69
HDAC3-212ENST00000492407 ALAS1P13196 640 aa10.77□□□□□ -0.69
HDAC3-212ENST00000492407 PDE1AP54750 535 aa10.77□□□□□ -0.69
HDAC3-212ENST00000492407 CTDSPL2Q05D32 466 aa10.77□□□□□ -0.69
HDAC3-212ENST00000492407 FSCN1Q16658 493 aaKnown RBP10.77□□□□□ -0.69
HDAC3-212ENST00000492407 ANKRD45Q5TZF3 282 aa10.77□□□□□ -0.69
HDAC3-212ENST00000492407 TAPT1Q6NXT6 567 aa10.77□□□□□ -0.69
HDAC3-212ENST00000492407 KCTD1Q719H9 257 aa10.77□□□□□ -0.69
HDAC3-212ENST00000492407 TLK2Q86UE8 772 aa10.77□□□□□ -0.69
HDAC3-212ENST00000492407 MAFAQ8NHW3 353 aaPredicted RBP10.77□□□□□ -0.69
HDAC3-212ENST00000492407 MPHOSPH6Q99547 160 aaKnown RBP10.77□□□□□ -0.69
HDAC3-212ENST00000492407 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.77□□□□□ -0.69
HDAC3-212ENST00000492407 MTIF3Q9H2K0 278 aaKnown RBP10.77□□□□□ -0.69
HDAC3-212ENST00000492407 CCPG1Q9ULG6 757 aa10.77□□□□□ -0.69
HDAC3-212ENST00000492407 ISY1Q9ULR0 285 aaKnown RBP10.77□□□□□ -0.69
HDAC3-212ENST00000492407 SMCHD1A6NHR9 2005 aa10.76□□□□□ -0.69
HDAC3-212ENST00000492407 RBM47A0AV96 593 aaKnown RBP10.76□□□□□ -0.69
HDAC3-212ENST00000492407 B4DLN1 442 aa10.76□□□□□ -0.69
HDAC3-212ENST00000492407 FGAP02671 866 aa10.76□□□□□ -0.69
HDAC3-212ENST00000492407 SUPT20HL2P0C7V6 817 aa10.76□□□□□ -0.69
HDAC3-212ENST00000492407 FOSL2P15408 326 aa10.76□□□□□ -0.69
HDAC3-212ENST00000492407 SMPD1P17405 629 aa10.76□□□□□ -0.69
HDAC3-212ENST00000492407 DNAJB2P25686 324 aa10.76□□□□□ -0.69
HDAC3-212ENST00000492407 MRPL12P52815 198 aaKnown RBP10.76□□□□□ -0.69
HDAC3-212ENST00000492407 MFAP1P55081 439 aaKnown RBP10.76□□□□□ -0.69
HDAC3-212ENST00000492407 RRP1P56182 461 aaKnown RBP10.76□□□□□ -0.69
HDAC3-212ENST00000492407 ITGA7Q13683 1181 aa10.76□□□□□ -0.69
HDAC3-212ENST00000492407 DUSP28Q4G0W2 176 aa10.76□□□□□ -0.69
HDAC3-212ENST00000492407 CCDC178Q5BJE1 867 aa10.76□□□□□ -0.69
HDAC3-212ENST00000492407 TMEM240Q5SV17 173 aa10.76□□□□□ -0.69
HDAC3-212ENST00000492407 NOL8Q76FK4 1167 aaKnown RBP10.76□□□□□ -0.69
HDAC3-212ENST00000492407 C16orf59Q7L2K0 433 aa10.76□□□□□ -0.69
HDAC3-212ENST00000492407 RGS22Q8NE09 1264 aa10.76□□□□□ -0.69
HDAC3-212ENST00000492407 HERVK_113Q902F9 699 aa10.76□□□□□ -0.69
HDAC3-212ENST00000492407 SYMPKQ92797 1274 aaKnown RBP10.76□□□□□ -0.69
HDAC3-212ENST00000492407 COL25A1Q9BXS0 654 aaPredicted RBP10.76□□□□□ -0.69
HDAC3-212ENST00000492407 RNF41Q9H4P4 317 aaPredicted RBP10.76□□□□□ -0.69
HDAC3-212ENST00000492407 IL23AQ9NPF7 189 aa10.76□□□□□ -0.69
HDAC3-212ENST00000492407 NKRFO15226 690 aaKnown RBP eCLIP10.75□□□□□ -0.69
HDAC3-212ENST00000492407 DYNC1LI2O43237 492 aaPredicted RBP10.75□□□□□ -0.69
HDAC3-212ENST00000492407 NMT2O60551 498 aa10.75□□□□□ -0.69
HDAC3-212ENST00000492407 KPNA6O60684 536 aa10.75□□□□□ -0.69
HDAC3-212ENST00000492407 HSPD1P10809 573 aaKnown RBP10.75□□□□□ -0.69
HDAC3-212ENST00000492407 RAB30Q15771 203 aa10.75□□□□□ -0.69
HDAC3-212ENST00000492407 GLIPR1L2Q4G1C9 344 aa10.75□□□□□ -0.69
HDAC3-212ENST00000492407 MUM1L1Q5H9M0 696 aa10.75□□□□□ -0.69
HDAC3-212ENST00000492407 VPS53Q5VIR6 699 aa10.75□□□□□ -0.69
HDAC3-212ENST00000492407 SYDE2Q5VT97 1194 aa10.75□□□□□ -0.69
HDAC3-212ENST00000492407 DGKHQ86XP1 1220 aa10.75□□□□□ -0.69
HDAC3-212ENST00000492407 RPUSD2Q8IZ73 545 aaKnown RBP10.75□□□□□ -0.69
HDAC3-212ENST00000492407 DNERQ8NFT8 737 aa10.75□□□□□ -0.69
HDAC3-212ENST00000492407 MYLIPQ8WY64 445 aa10.75□□□□□ -0.69
HDAC3-212ENST00000492407 TIFAQ96CG3 184 aa10.75□□□□□ -0.69
HDAC3-212ENST00000492407 TMEM47Q9BQJ4 181 aa10.75□□□□□ -0.69
HDAC3-212ENST00000492407 ZNF576Q9H609 170 aa10.75□□□□□ -0.69
HDAC3-212ENST00000492407 POLR3EQ9NVU0 708 aa10.75□□□□□ -0.69
HDAC3-212ENST00000492407 ASTN1O14525 1302 aa10.75□□□□□ -0.69
HDAC3-212ENST00000492407 WDR19Q8NEZ3 1342 aa10.75□□□□□ -0.69
HDAC3-212ENST00000492407 CUL9Q8IWT3 2517 aa10.74□□□□□ -0.69
HDAC3-212ENST00000492407 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.74□□□□□ -0.69
HDAC3-212ENST00000492407 FGBP02675 491 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms