RNA–Protein interactions for RNA: ENST00000491867.5

ATG4B-222, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 435 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-222ENST00000491867 NDUFB10O96000 172 aa16.64■□□□□ 0.25
ATG4B-222ENST00000491867 SMPD1P17405 629 aa16.64■□□□□ 0.25
ATG4B-222ENST00000491867 SSTR3P32745 418 aaPredicted RBP16.64■□□□□ 0.25
ATG4B-222ENST00000491867 CSPP1Q1MSJ5 1256 aa16.64■□□□□ 0.25
ATG4B-222ENST00000491867 AACSQ86V21 672 aa16.64■□□□□ 0.25
ATG4B-222ENST00000491867 FAM178BQ8IXR5 827 aa16.64■□□□□ 0.25
ATG4B-222ENST00000491867 CHST13Q8NET6 341 aa16.64■□□□□ 0.25
ATG4B-222ENST00000491867 KIFC2Q96AC6 838 aa16.64■□□□□ 0.25
ATG4B-222ENST00000491867 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.64■□□□□ 0.25
ATG4B-222ENST00000491867 C1orf115Q9H7X2 142 aa16.64■□□□□ 0.25
ATG4B-222ENST00000491867 HOMER2Q9NSB8 354 aa16.64■□□□□ 0.25
ATG4B-222ENST00000491867 CACNA1HO95180 2353 aa16.64■□□□□ 0.25
ATG4B-222ENST00000491867 PTPRZ1P23471 2315 aaPredicted RBP16.63■□□□□ 0.25
ATG4B-222ENST00000491867 TET1Q8NFU7 2136 aa16.63■□□□□ 0.25
ATG4B-222ENST00000491867 F5H6K3 240 aa16.63■□□□□ 0.25
ATG4B-222ENST00000491867 MBD4O95243 580 aa16.63■□□□□ 0.25
ATG4B-222ENST00000491867 KLRC3Q07444 240 aa16.63■□□□□ 0.25
ATG4B-222ENST00000491867 AMOTL1Q8IY63 956 aa16.63■□□□□ 0.25
ATG4B-222ENST00000491867 FAM133AQ8N9E0 248 aa16.63■□□□□ 0.25
ATG4B-222ENST00000491867 GDPD5Q8WTR4 605 aa16.63■□□□□ 0.25
ATG4B-222ENST00000491867 FRAT1Q92837 279 aaPredicted RBP16.63■□□□□ 0.25
ATG4B-222ENST00000491867 FBXL18Q96ME1 805 aa16.63■□□□□ 0.25
ATG4B-222ENST00000491867 UBE2ZQ9H832 354 aaPredicted RBP16.63■□□□□ 0.25
ATG4B-222ENST00000491867 SLC38A10Q9HBR0 1119 aa16.63■□□□□ 0.25
ATG4B-222ENST00000491867 DDX49Q9Y6V7 483 aaKnown RBP16.63■□□□□ 0.25
ATG4B-222ENST00000491867 TNKSO95271 1327 aa16.63■□□□□ 0.25
ATG4B-222ENST00000491867 GOLIM4O00461 696 aa16.62■□□□□ 0.25
ATG4B-222ENST00000491867 SUPT20HL2P0C7V6 817 aa16.62■□□□□ 0.25
ATG4B-222ENST00000491867 ALADP13716 330 aa16.62■□□□□ 0.25
ATG4B-222ENST00000491867 SLFNL1Q499Z3 407 aa16.62■□□□□ 0.25
ATG4B-222ENST00000491867 FTOQ9C0B1 505 aaKnown RBP eCLIP16.62■□□□□ 0.25
ATG4B-222ENST00000491867 PDGFCQ9NRA1 345 aa16.62■□□□□ 0.25
ATG4B-222ENST00000491867 SOWAHBA6NEL2 793 aa16.61■□□□□ 0.25
ATG4B-222ENST00000491867 ASB14A6NK59 587 aa16.61■□□□□ 0.25
ATG4B-222ENST00000491867 KCNA5P22460 613 aa16.61■□□□□ 0.25
ATG4B-222ENST00000491867 LEXMQ3ZCV2 418 aa16.61■□□□□ 0.25
ATG4B-222ENST00000491867 TMEM63BQ5T3F8 832 aa16.61■□□□□ 0.25
ATG4B-222ENST00000491867 TMEM57Q8N5G2 664 aa16.61■□□□□ 0.25
ATG4B-222ENST00000491867 DNAJC2Q99543 621 aaKnown RBP16.61■□□□□ 0.25
ATG4B-222ENST00000491867 LMCD1Q9NZU5 365 aa16.61■□□□□ 0.25
ATG4B-222ENST00000491867 USP34Q70CQ2 3546 aa16.61■□□□□ 0.25
ATG4B-222ENST00000491867 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.6■□□□□ 0.25
ATG4B-222ENST00000491867 LCHNA4D1U4 455 aa16.6■□□□□ 0.25
ATG4B-222ENST00000491867 RFC2P35250 354 aa16.6■□□□□ 0.25
ATG4B-222ENST00000491867 IQSEC1Q6DN90 963 aa16.6■□□□□ 0.25
ATG4B-222ENST00000491867 EEPD1Q7L9B9 569 aa16.6■□□□□ 0.25
ATG4B-222ENST00000491867 A1CFQ9NQ94 594 aaKnown RBP16.6■□□□□ 0.25
ATG4B-222ENST00000491867 NYAP2Q9P242 653 aa16.6■□□□□ 0.25
ATG4B-222ENST00000491867 Q9Y3F1 56 aa16.6■□□□□ 0.25
ATG4B-222ENST00000491867 OAZ1P54368 228 aa16.59■□□□□ 0.25
ATG4B-222ENST00000491867 TAPT1Q6NXT6 567 aa16.59■□□□□ 0.25
ATG4B-222ENST00000491867 CTR9Q6PD62 1173 aa16.59■□□□□ 0.25
ATG4B-222ENST00000491867 FBXO16Q8IX29 292 aaPredicted RBP16.59■□□□□ 0.25
ATG4B-222ENST00000491867 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.59■□□□□ 0.25
ATG4B-222ENST00000491867 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.59■□□□□ 0.25
ATG4B-222ENST00000491867 DDRGK1Q96HY6 314 aa16.59■□□□□ 0.25
ATG4B-222ENST00000491867 KCNH6Q9H252 994 aa16.59■□□□□ 0.25
ATG4B-222ENST00000491867 ACAD9Q9H845 621 aa16.59■□□□□ 0.25
ATG4B-222ENST00000491867 FEM1BQ9UK73 627 aa16.59■□□□□ 0.25
ATG4B-222ENST00000491867 MTUS1Q9ULD2 1270 aa16.59■□□□□ 0.25
ATG4B-222ENST00000491867 COG6Q9Y2V7 657 aa16.59■□□□□ 0.25
ATG4B-222ENST00000491867 MYO7AQ13402 2215 aa16.58■□□□□ 0.25
ATG4B-222ENST00000491867 RIF1Q5UIP0 2472 aaKnown RBP16.58■□□□□ 0.25
ATG4B-222ENST00000491867 IQCF3P0C7M6 154 aa16.58■□□□□ 0.24
ATG4B-222ENST00000491867 IL9P15248 144 aa16.58■□□□□ 0.24
ATG4B-222ENST00000491867 FAM47CQ5HY64 1035 aa16.58■□□□□ 0.24
ATG4B-222ENST00000491867 PTCRAQ6ISU1 281 aaPredicted RBP16.58■□□□□ 0.24
ATG4B-222ENST00000491867 TMCO2Q7Z6W1 182 aaPredicted RBP16.58■□□□□ 0.24
ATG4B-222ENST00000491867 RETREG2Q8NC44 543 aa16.58■□□□□ 0.24
ATG4B-222ENST00000491867 IL1RAPL2Q9NP60 686 aa16.58■□□□□ 0.24
ATG4B-222ENST00000491867 CLIP2Q9UDT6 1046 aa16.58■□□□□ 0.24
ATG4B-222ENST00000491867 EXOC6BQ9Y2D4 811 aa16.58■□□□□ 0.24
ATG4B-222ENST00000491867 COL4A4P53420 1690 aaPredicted RBP16.58■□□□□ 0.24
ATG4B-222ENST00000491867 C5orf42Q9H799 3197 aa16.58■□□□□ 0.24
ATG4B-222ENST00000491867 ZNF536O15090 1300 aa16.57■□□□□ 0.24
ATG4B-222ENST00000491867 DCXO43602 365 aa16.57■□□□□ 0.24
ATG4B-222ENST00000491867 RASA1P20936 1047 aa16.57■□□□□ 0.24
ATG4B-222ENST00000491867 ADD2P35612 726 aa16.57■□□□□ 0.24
ATG4B-222ENST00000491867 KCNJ6P48051 423 aa16.57■□□□□ 0.24
ATG4B-222ENST00000491867 ERC1Q8IUD2 1116 aa16.57■□□□□ 0.24
ATG4B-222ENST00000491867 PPP1R13LQ8WUF5 828 aa16.57■□□□□ 0.24
ATG4B-222ENST00000491867 ZBED2Q9BTP6 218 aa16.57■□□□□ 0.24
ATG4B-222ENST00000491867 SUGCTQ9HAC7 445 aa16.57■□□□□ 0.24
ATG4B-222ENST00000491867 RNF146Q9NTX7 359 aa16.57■□□□□ 0.24
ATG4B-222ENST00000491867 POLR3EQ9NVU0 708 aa16.57■□□□□ 0.24
ATG4B-222ENST00000491867 SLC4A4Q9Y6R1 1079 aa16.57■□□□□ 0.24
ATG4B-222ENST00000491867 GRXCR2A6NFK2 248 aa16.56■□□□□ 0.24
ATG4B-222ENST00000491867 PITPNM1O00562 1244 aa16.56■□□□□ 0.24
ATG4B-222ENST00000491867 BAIAP3O94812 1187 aa16.56■□□□□ 0.24
ATG4B-222ENST00000491867 MYL3P08590 195 aa16.56■□□□□ 0.24
ATG4B-222ENST00000491867 PURAQ00577 322 aaKnown RBP16.56■□□□□ 0.24
ATG4B-222ENST00000491867 NBPF20Q3BBV1 942 aa16.56■□□□□ 0.24
ATG4B-222ENST00000491867 KIAA1211Q6ZU35 1233 aa16.56■□□□□ 0.24
ATG4B-222ENST00000491867 STK11IPQ8N1F8 1099 aa16.56■□□□□ 0.24
ATG4B-222ENST00000491867 ZBED9Q6R2W3 1325 aa16.55■□□□□ 0.24
ATG4B-222ENST00000491867 POTEB3A0JP26 581 aa16.55■□□□□ 0.24
ATG4B-222ENST00000491867 CHGBP05060 677 aa16.55■□□□□ 0.24
ATG4B-222ENST00000491867 WDR5P61964 334 aaKnown RBP16.55■□□□□ 0.24
ATG4B-222ENST00000491867 ZKSCAN2Q63HK3 967 aa16.55■□□□□ 0.24
ATG4B-222ENST00000491867 POTEBQ6S5H4 581 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms