RNA–Protein interactions for RNA: ENST00000491162.1

CLCN2-209, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 4

Gene CLCN2, Length 557 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-209ENST00000491162 RCSD1Q6JBY9 416 aa13.51□□□□□ -0.25
CLCN2-209ENST00000491162 CXCL17Q6UXB2 119 aa13.51□□□□□ -0.25
CLCN2-209ENST00000491162 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.51□□□□□ -0.25
CLCN2-209ENST00000491162 PPP1R13LQ8WUF5 828 aa13.51□□□□□ -0.25
CLCN2-209ENST00000491162 VTI1AQ96AJ9 217 aa13.51□□□□□ -0.25
CLCN2-209ENST00000491162 FBXO40Q9UH90 709 aa13.51□□□□□ -0.25
CLCN2-209ENST00000491162 SYNPO2Q9UMS6 1093 aa13.51□□□□□ -0.25
CLCN2-209ENST00000491162 GRIN2DO15399 1336 aa13.5□□□□□ -0.25
CLCN2-209ENST00000491162 DCDC2CA8MYV0 355 aa13.5□□□□□ -0.25
CLCN2-209ENST00000491162 TIMP1P01033 207 aa13.5□□□□□ -0.25
CLCN2-209ENST00000491162 SLC3A2P08195 630 aaKnown RBP13.5□□□□□ -0.25
CLCN2-209ENST00000491162 CSF2RAP15509 400 aa13.5□□□□□ -0.25
CLCN2-209ENST00000491162 SMPD1P17405 629 aa13.5□□□□□ -0.25
CLCN2-209ENST00000491162 PBX2P40425 430 aa13.5□□□□□ -0.25
CLCN2-209ENST00000491162 PSMC6P62333 389 aa13.5□□□□□ -0.25
CLCN2-209ENST00000491162 TNFAIP2Q03169 654 aa13.5□□□□□ -0.25
CLCN2-209ENST00000491162 NMIQ13287 307 aaPredicted RBP13.5□□□□□ -0.25
CLCN2-209ENST00000491162 LRRFIP1Q32MZ4 808 aaKnown RBP13.5□□□□□ -0.25
CLCN2-209ENST00000491162 NSMFQ6X4W1 530 aa13.5□□□□□ -0.25
CLCN2-209ENST00000491162 FAM160B2Q86V87 743 aa13.5□□□□□ -0.25
CLCN2-209ENST00000491162 FAM126BQ8IXS8 530 aa13.5□□□□□ -0.25
CLCN2-209ENST00000491162 CHURC1Q8WUH1 139 aa13.5□□□□□ -0.25
CLCN2-209ENST00000491162 NUP133Q8WUM0 1156 aa13.5□□□□□ -0.25
CLCN2-209ENST00000491162 GLT1D1Q96MS3 346 aa13.5□□□□□ -0.25
CLCN2-209ENST00000491162 TOX2Q96NM4 488 aa13.5□□□□□ -0.25
CLCN2-209ENST00000491162 LNPKQ9C0E8 428 aa13.5□□□□□ -0.25
CLCN2-209ENST00000491162 GPCPD1Q9NPB8 672 aa13.5□□□□□ -0.25
CLCN2-209ENST00000491162 TOMM22Q9NS69 142 aa13.5□□□□□ -0.25
CLCN2-209ENST00000491162 CYP39A1Q9NYL5 469 aa13.5□□□□□ -0.25
CLCN2-209ENST00000491162 ANAPC4Q9UJX5 808 aa13.5□□□□□ -0.25
CLCN2-209ENST00000491162 GNEQ9Y223 722 aaKnown RBP13.5□□□□□ -0.25
CLCN2-209ENST00000491162 ARVCFO00192 962 aa13.49□□□□□ -0.25
CLCN2-209ENST00000491162 NFIBO00712 420 aa13.49□□□□□ -0.25
CLCN2-209ENST00000491162 FGAP02671 866 aa13.49□□□□□ -0.25
CLCN2-209ENST00000491162 CYP2C18P33260 490 aa13.49□□□□□ -0.25
CLCN2-209ENST00000491162 NOVP48745 357 aa13.49□□□□□ -0.25
CLCN2-209ENST00000491162 GRIN2CQ14957 1233 aa13.49□□□□□ -0.25
CLCN2-209ENST00000491162 TAPT1Q6NXT6 567 aa13.49□□□□□ -0.25
CLCN2-209ENST00000491162 NOL8Q76FK4 1167 aaKnown RBP13.49□□□□□ -0.25
CLCN2-209ENST00000491162 TLK2Q86UE8 772 aa13.49□□□□□ -0.25
CLCN2-209ENST00000491162 TBC1D10CQ8IV04 446 aa13.49□□□□□ -0.25
CLCN2-209ENST00000491162 MAFAQ8NHW3 353 aaPredicted RBP13.49□□□□□ -0.25
CLCN2-209ENST00000491162 EVI5LQ96CN4 794 aa13.49□□□□□ -0.25
CLCN2-209ENST00000491162 TMEM47Q9BQJ4 181 aa13.49□□□□□ -0.25
CLCN2-209ENST00000491162 CPVLQ9H3G5 476 aa13.49□□□□□ -0.25
CLCN2-209ENST00000491162 CCPG1Q9ULG6 757 aa13.49□□□□□ -0.25
CLCN2-209ENST00000491162 ELP1O95163 1332 aa13.48□□□□□ -0.25
CLCN2-209ENST00000491162 A0A0U1RQG5 324 aaPredicted RBP13.48□□□□□ -0.25
CLCN2-209ENST00000491162 ORC4O43929 436 aa13.48□□□□□ -0.25
CLCN2-209ENST00000491162 FGRP09769 529 aa13.48□□□□□ -0.25
CLCN2-209ENST00000491162 HSPD1P10809 573 aaKnown RBP13.48□□□□□ -0.25
CLCN2-209ENST00000491162 DNAJB2P25686 324 aa13.48□□□□□ -0.25
CLCN2-209ENST00000491162 BAATQ14032 418 aaPredicted RBP13.48□□□□□ -0.25
CLCN2-209ENST00000491162 TMEM240Q5SV17 173 aa13.48□□□□□ -0.25
CLCN2-209ENST00000491162 MFSD5Q6N075 450 aa13.48□□□□□ -0.25
CLCN2-209ENST00000491162 SLC30A10Q6XR72 485 aa13.48□□□□□ -0.25
CLCN2-209ENST00000491162 USP38Q8NB14 1042 aa13.48□□□□□ -0.25
CLCN2-209ENST00000491162 ZKSCAN3Q9BRR0 538 aa13.48□□□□□ -0.25
CLCN2-209ENST00000491162 RANBP17Q9H2T7 1088 aaKnown RBP13.48□□□□□ -0.25
CLCN2-209ENST00000491162 PTPRSQ13332 1948 aa13.47□□□□□ -0.25
CLCN2-209ENST00000491162 NEDD4P46934 1319 aa13.47□□□□□ -0.25
CLCN2-209ENST00000491162 DYNC1LI2O43237 492 aaPredicted RBP13.47□□□□□ -0.25
CLCN2-209ENST00000491162 PLA2G6O60733 806 aa13.47□□□□□ -0.25
CLCN2-209ENST00000491162 CD4P01730 458 aa13.47□□□□□ -0.25
CLCN2-209ENST00000491162 ICAM1P05362 532 aa13.47□□□□□ -0.25
CLCN2-209ENST00000491162 FOSL2P15408 326 aa13.47□□□□□ -0.25
CLCN2-209ENST00000491162 ALX1Q15699 326 aa13.47□□□□□ -0.25
CLCN2-209ENST00000491162 FSCN1Q16658 493 aaKnown RBP13.47□□□□□ -0.25
CLCN2-209ENST00000491162 B4GALNT3Q6L9W6 998 aa13.47□□□□□ -0.25
CLCN2-209ENST00000491162 PCSK9Q8NBP7 692 aaKnown RBP13.47□□□□□ -0.25
CLCN2-209ENST00000491162 TRPV6Q9H1D0 765 aa13.47□□□□□ -0.25
CLCN2-209ENST00000491162 HELLSQ9NRZ9 838 aa13.47□□□□□ -0.25
CLCN2-209ENST00000491162 CXXC1Q9P0U4 656 aaPredicted RBP13.47□□□□□ -0.25
CLCN2-209ENST00000491162 VCANP13611 3396 aa13.47□□□□□ -0.25
CLCN2-209ENST00000491162 KIAA1217Q5T5P2 1943 aa13.47□□□□□ -0.25
CLCN2-209ENST00000491162 B4GALT4O60513 344 aa13.46□□□□□ -0.25
CLCN2-209ENST00000491162 FDX1P10109 184 aa13.46□□□□□ -0.25
CLCN2-209ENST00000491162 PDHBP11177 359 aa13.46□□□□□ -0.25
CLCN2-209ENST00000491162 NKX3-2P78367 333 aa13.46□□□□□ -0.25
CLCN2-209ENST00000491162 HDAC1Q13547 482 aaPredicted RBP13.46□□□□□ -0.25
CLCN2-209ENST00000491162 TKFCQ3LXA3 575 aa13.46□□□□□ -0.25
CLCN2-209ENST00000491162 MCMDC2Q4G0Z9 681 aa13.46□□□□□ -0.25
CLCN2-209ENST00000491162 SYDE2Q5VT97 1194 aa13.46□□□□□ -0.25
CLCN2-209ENST00000491162 ZNF365Q70YC5 407 aa13.46□□□□□ -0.25
CLCN2-209ENST00000491162 SLC43A3Q8NBI5 491 aa13.46□□□□□ -0.25
CLCN2-209ENST00000491162 DCAF4Q8WV16 495 aa13.46□□□□□ -0.25
CLCN2-209ENST00000491162 CLEC4DQ8WXI8 215 aa13.46□□□□□ -0.25
CLCN2-209ENST00000491162 RILPL2Q969X0 211 aa13.46□□□□□ -0.25
CLCN2-209ENST00000491162 VWCEQ96DN2 955 aa13.46□□□□□ -0.25
CLCN2-209ENST00000491162 SPC25Q9HBM1 224 aa13.46□□□□□ -0.25
CLCN2-209ENST00000491162 PRDM6Q9NQX0 595 aa13.46□□□□□ -0.25
CLCN2-209ENST00000491162 TANC1Q9C0D5 1861 aa13.46□□□□□ -0.26
CLCN2-209ENST00000491162 TRIP12Q14669 1992 aaPredicted RBP13.45□□□□□ -0.26
CLCN2-209ENST00000491162 SCN10AQ9Y5Y9 1956 aa13.45□□□□□ -0.26
CLCN2-209ENST00000491162 MYO9BQ13459 2157 aa13.45□□□□□ -0.26
CLCN2-209ENST00000491162 CCDC171Q6TFL3 1326 aa13.45□□□□□ -0.26
CLCN2-209ENST00000491162 ASB14A6NK59 587 aa13.45□□□□□ -0.26
CLCN2-209ENST00000491162 TRIM6-TRIM34B2RNG4 842 aa13.45□□□□□ -0.26
CLCN2-209ENST00000491162 IGHDP01880 384 aa13.45□□□□□ -0.26
CLCN2-209ENST00000491162 GOLGA8HP0CJ92 632 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms