RNA–Protein interactions for RNA: ENST00000490895.5

IMP4-216, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 3

Gene IMP4, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-216ENST00000490895 PDLIM7Q9NR12 457 aa18.03■□□□□ 0.48
IMP4-216ENST00000490895 CTNNA3Q9UI47 895 aa18.03■□□□□ 0.48
IMP4-216ENST00000490895 LAMA4Q16363 1823 aa18.02■□□□□ 0.48
IMP4-216ENST00000490895 MYADML2A6NDP7 307 aa18.02■□□□□ 0.48
IMP4-216ENST00000490895 MOXD2PA6NHM9 499 aa18.02■□□□□ 0.48
IMP4-216ENST00000490895 KDM4AO75164 1064 aa18.02■□□□□ 0.48
IMP4-216ENST00000490895 GJA9P57773 515 aa18.02■□□□□ 0.48
IMP4-216ENST00000490895 IRX5P78411 483 aaPredicted RBP18.02■□□□□ 0.48
IMP4-216ENST00000490895 IMMTQ16891 758 aaKnown RBP18.02■□□□□ 0.48
IMP4-216ENST00000490895 CCDC178Q5BJE1 867 aa18.02■□□□□ 0.48
IMP4-216ENST00000490895 GPR153Q6NV75 609 aa18.02■□□□□ 0.48
IMP4-216ENST00000490895 NSMFQ6X4W1 530 aa18.02■□□□□ 0.48
IMP4-216ENST00000490895 IQCA1Q86XH1 822 aa18.02■□□□□ 0.48
IMP4-216ENST00000490895 ANKS1AQ92625 1134 aa18.02■□□□□ 0.48
IMP4-216ENST00000490895 TRIM43BA6NCK2 446 aa18.01■□□□□ 0.47
IMP4-216ENST00000490895 B4E1Z4 1266 aa18.01■□□□□ 0.47
IMP4-216ENST00000490895 C6orf222P0C671 652 aaPredicted RBP18.01■□□□□ 0.47
IMP4-216ENST00000490895 NKX3-2P78367 333 aa18.01■□□□□ 0.47
IMP4-216ENST00000490895 GPATCH4Q5T3I0 446 aaKnown RBP18.01■□□□□ 0.47
IMP4-216ENST00000490895 SH3RF1Q7Z6J0 888 aa18.01■□□□□ 0.47
IMP4-216ENST00000490895 NUP133Q8WUM0 1156 aa18.01■□□□□ 0.47
IMP4-216ENST00000490895 TRIM43Q96BQ3 446 aaPredicted RBP18.01■□□□□ 0.47
IMP4-216ENST00000490895 SPC25Q9HBM1 224 aa18.01■□□□□ 0.47
IMP4-216ENST00000490895 PRDM5Q9NQX1 630 aaPredicted RBP18.01■□□□□ 0.47
IMP4-216ENST00000490895 ZSWIM5Q9P217 1185 aa18.01■□□□□ 0.47
IMP4-216ENST00000490895 PNMA2Q9UL42 364 aa18.01■□□□□ 0.47
IMP4-216ENST00000490895 LTBP2Q14767 1821 aa18■□□□□ 0.47
IMP4-216ENST00000490895 NFIBO00712 420 aa18■□□□□ 0.47
IMP4-216ENST00000490895 CTAGE5O15320 804 aa18■□□□□ 0.47
IMP4-216ENST00000490895 BAATQ14032 418 aaPredicted RBP18■□□□□ 0.47
IMP4-216ENST00000490895 ANKRD33Q7Z3H0 272 aa18■□□□□ 0.47
IMP4-216ENST00000490895 PCSK9Q8NBP7 692 aaKnown RBP18■□□□□ 0.47
IMP4-216ENST00000490895 PNMA1Q8ND90 353 aa18■□□□□ 0.47
IMP4-216ENST00000490895 MORC4Q8TE76 937 aa18■□□□□ 0.47
IMP4-216ENST00000490895 CLEC4DQ8WXI8 215 aa18■□□□□ 0.47
IMP4-216ENST00000490895 PURBQ96QR8 312 aaKnown RBP18■□□□□ 0.47
IMP4-216ENST00000490895 ZSCAN10Q96SZ4 725 aaPredicted RBP18■□□□□ 0.47
IMP4-216ENST00000490895 STARD7Q9NQZ5 370 aa18■□□□□ 0.47
IMP4-216ENST00000490895 DDX49Q9Y6V7 483 aaKnown RBP18■□□□□ 0.47
IMP4-216ENST00000490895 ELP1O95163 1332 aa17.99■□□□□ 0.47
IMP4-216ENST00000490895 WDR19Q8NEZ3 1342 aa17.99■□□□□ 0.47
IMP4-216ENST00000490895 RAD50Q92878 1312 aa17.99■□□□□ 0.47
IMP4-216ENST00000490895 LAMA2P24043 3122 aaKnown RBP17.99■□□□□ 0.47
IMP4-216ENST00000490895 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.99■□□□□ 0.47
IMP4-216ENST00000490895 PQBP1O60828 265 aaKnown RBP17.99■□□□□ 0.47
IMP4-216ENST00000490895 ASGR1P07306 291 aa17.99■□□□□ 0.47
IMP4-216ENST00000490895 CLTBP09497 229 aa17.99■□□□□ 0.47
IMP4-216ENST00000490895 TNFAIP2Q03169 654 aa17.99■□□□□ 0.47
IMP4-216ENST00000490895 GNASQ5JWF2 1037 aa17.99■□□□□ 0.47
IMP4-216ENST00000490895 ENAHQ8N8S7 591 aaPredicted RBP17.99■□□□□ 0.47
IMP4-216ENST00000490895 BADQ92934 168 aa17.99■□□□□ 0.47
IMP4-216ENST00000490895 TOX2Q96NM4 488 aa17.99■□□□□ 0.47
IMP4-216ENST00000490895 KRT23Q9C075 422 aa17.99■□□□□ 0.47
IMP4-216ENST00000490895 CNNM2Q9H8M5 875 aa17.99■□□□□ 0.47
IMP4-216ENST00000490895 GNEQ9Y223 722 aaKnown RBP17.99■□□□□ 0.47
IMP4-216ENST00000490895 KIAA0355O15063 1070 aa17.98■□□□□ 0.47
IMP4-216ENST00000490895 GOLGA8HP0CJ92 632 aa17.98■□□□□ 0.47
IMP4-216ENST00000490895 TAPT1Q6NXT6 567 aa17.98■□□□□ 0.47
IMP4-216ENST00000490895 GLT1D1Q96MS3 346 aa17.98■□□□□ 0.47
IMP4-216ENST00000490895 KAT14Q9H8E8 782 aa17.98■□□□□ 0.47
IMP4-216ENST00000490895 ADD3Q9UEY8 706 aaKnown RBP17.98■□□□□ 0.47
IMP4-216ENST00000490895 LCTP09848 1927 aa17.98■□□□□ 0.47
IMP4-216ENST00000490895 LOC102724159A0A0B4J2E5 919 aa17.97■□□□□ 0.47
IMP4-216ENST00000490895 ITGB8P26012 769 aa17.97■□□□□ 0.47
IMP4-216ENST00000490895 CHMLP26374 656 aa17.97■□□□□ 0.47
IMP4-216ENST00000490895 CDK7P50613 346 aa17.97■□□□□ 0.47
IMP4-216ENST00000490895 FAAP100Q0VG06 881 aa17.97■□□□□ 0.47
IMP4-216ENST00000490895 PWP2Q15269 919 aaKnown RBP17.97■□□□□ 0.47
IMP4-216ENST00000490895 IQSEC1Q6DN90 963 aa17.97■□□□□ 0.47
IMP4-216ENST00000490895 SLC30A10Q6XR72 485 aa17.97■□□□□ 0.47
IMP4-216ENST00000490895 NOL8Q76FK4 1167 aaKnown RBP17.97■□□□□ 0.47
IMP4-216ENST00000490895 FBXO16Q8IX29 292 aaPredicted RBP17.97■□□□□ 0.47
IMP4-216ENST00000490895 RUFY2Q8WXA3 655 aa17.97■□□□□ 0.47
IMP4-216ENST00000490895 UBA5Q9GZZ9 404 aa17.97■□□□□ 0.47
IMP4-216ENST00000490895 CPVLQ9H3G5 476 aa17.97■□□□□ 0.47
IMP4-216ENST00000490895 VTA1Q9NP79 307 aa17.97■□□□□ 0.47
IMP4-216ENST00000490895 PDGFCQ9NRA1 345 aa17.97■□□□□ 0.47
IMP4-216ENST00000490895 TNKSO95271 1327 aa17.97■□□□□ 0.47
IMP4-216ENST00000490895 LRRC37A2A6NM11 1700 aa17.96■□□□□ 0.47
IMP4-216ENST00000490895 PTPDC1A2A3K4 754 aa17.96■□□□□ 0.47
IMP4-216ENST00000490895 DCDC2CA8MYV0 355 aa17.96■□□□□ 0.47
IMP4-216ENST00000490895 SMPD1P17405 629 aa17.96■□□□□ 0.47
IMP4-216ENST00000490895 ALDH5A1P51649 535 aaPredicted RBP17.96■□□□□ 0.47
IMP4-216ENST00000490895 ASPRV1Q53RT3 343 aa17.96■□□□□ 0.47
IMP4-216ENST00000490895 EEPD1Q7L9B9 569 aa17.96■□□□□ 0.47
IMP4-216ENST00000490895 TLK2Q86UE8 772 aa17.96■□□□□ 0.47
IMP4-216ENST00000490895 TMEM39AQ9NV64 488 aa17.96■□□□□ 0.47
IMP4-216ENST00000490895 RPS6P62753 249 aaKnown RBP17.95■□□□□ 0.46
IMP4-216ENST00000490895 BEX3Q00994 111 aa17.95■□□□□ 0.46
IMP4-216ENST00000490895 PTH1RQ03431 593 aa17.95■□□□□ 0.46
IMP4-216ENST00000490895 SHHQ15465 462 aa17.95■□□□□ 0.46
IMP4-216ENST00000490895 RNF207Q6ZRF8 634 aa17.95■□□□□ 0.46
IMP4-216ENST00000490895 DEFB123Q8N688 67 aa17.95■□□□□ 0.46
IMP4-216ENST00000490895 RGS22Q8NE09 1264 aa17.95■□□□□ 0.46
IMP4-216ENST00000490895 UBAC1Q9BSL1 405 aa17.95■□□□□ 0.46
IMP4-216ENST00000490895 Q9Y3F1 56 aa17.95■□□□□ 0.46
IMP4-216ENST00000490895 MROH7Q68CQ1 1323 aa17.95■□□□□ 0.46
IMP4-216ENST00000490895 A0A0U1RQG5 324 aaPredicted RBP17.94■□□□□ 0.46
IMP4-216ENST00000490895 ARVCFO00192 962 aa17.94■□□□□ 0.46
IMP4-216ENST00000490895 DYNC1LI2O43237 492 aaPredicted RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms