RNA–Protein interactions for RNA: ENST00000490869.1

UBA1-209, Transcript of ubiquitin like modifier activating enzyme 1, human

TSL 2

Gene UBA1, Length 917 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA1-209	ENST00000490869	CLTB	P09497	229 aa		12.81	□□□□□ -0.36
UBA1-209	ENST00000490869	SNHG28	P0DPA3	235 aa		12.81	□□□□□ -0.36
UBA1-209	ENST00000490869	NT5C2	P49902	561 aa		12.81	□□□□□ -0.36
UBA1-209	ENST00000490869	GJA9	P57773	515 aa		12.81	□□□□□ -0.36
UBA1-209	ENST00000490869	IRX5	P78411	483 aa	Predicted RBP	12.81	□□□□□ -0.36
UBA1-209	ENST00000490869	ZNF543	Q08ER8	600 aa		12.81	□□□□□ -0.36
UBA1-209	ENST00000490869	IMMT	Q16891	758 aa	Known RBP	12.81	□□□□□ -0.36
UBA1-209	ENST00000490869	CCSAP	Q6IQ19	270 aa	Predicted RBP	12.81	□□□□□ -0.36
UBA1-209	ENST00000490869	GPR153	Q6NV75	609 aa		12.81	□□□□□ -0.36
UBA1-209	ENST00000490869	IQCA1	Q86XH1	822 aa		12.81	□□□□□ -0.36
UBA1-209	ENST00000490869	DGKH	Q86XP1	1220 aa		12.81	□□□□□ -0.36
UBA1-209	ENST00000490869	BAD	Q92934	168 aa		12.81	□□□□□ -0.36
UBA1-209	ENST00000490869	TRIM43	Q96BQ3	446 aa	Predicted RBP	12.81	□□□□□ -0.36
UBA1-209	ENST00000490869	UPF3A	Q9H1J1	476 aa	Known RBP	12.81	□□□□□ -0.36
UBA1-209	ENST00000490869	LRRC37A2	A6NM11	1700 aa		12.81	□□□□□ -0.36
UBA1-209	ENST00000490869	ASTN1	O14525	1302 aa		12.81	□□□□□ -0.36
UBA1-209	ENST00000490869	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	12.8	□□□□□ -0.36
UBA1-209	ENST00000490869		B4E1Z4	1266 aa		12.8	□□□□□ -0.36
UBA1-209	ENST00000490869	ASGR1	P07306	291 aa		12.8	□□□□□ -0.36
UBA1-209	ENST00000490869	GSPT1	P15170	499 aa	Known RBP	12.8	□□□□□ -0.36
UBA1-209	ENST00000490869	TNFAIP2	Q03169	654 aa		12.8	□□□□□ -0.36
UBA1-209	ENST00000490869	CCDC178	Q5BJE1	867 aa		12.8	□□□□□ -0.36
UBA1-209	ENST00000490869	TTC22	Q5TAA0	569 aa		12.8	□□□□□ -0.36
UBA1-209	ENST00000490869	NOL8	Q76FK4	1167 aa	Known RBP	12.8	□□□□□ -0.36
UBA1-209	ENST00000490869	PCSK9	Q8NBP7	692 aa	Known RBP	12.8	□□□□□ -0.36
UBA1-209	ENST00000490869	GLT1D1	Q96MS3	346 aa		12.8	□□□□□ -0.36
UBA1-209	ENST00000490869	PURB	Q96QR8	312 aa	Known RBP	12.8	□□□□□ -0.36
UBA1-209	ENST00000490869	IL25	Q9H293	177 aa		12.8	□□□□□ -0.36
UBA1-209	ENST00000490869	CTNNA3	Q9UI47	895 aa		12.8	□□□□□ -0.36
UBA1-209	ENST00000490869	DDX49	Q9Y6V7	483 aa	Known RBP	12.8	□□□□□ -0.36
UBA1-209	ENST00000490869	MCM3AP	O60318	1980 aa		12.8	□□□□□ -0.36
UBA1-209	ENST00000490869	PTPDC1	A2A3K4	754 aa		12.79	□□□□□ -0.36
UBA1-209	ENST00000490869	NFIB	O00712	420 aa		12.79	□□□□□ -0.36
UBA1-209	ENST00000490869	GOLGA8H	P0CJ92	632 aa		12.79	□□□□□ -0.36
UBA1-209	ENST00000490869	BAAT	Q14032	418 aa	Predicted RBP	12.79	□□□□□ -0.36
UBA1-209	ENST00000490869	GNAS	Q5JWF2	1037 aa		12.79	□□□□□ -0.36
UBA1-209	ENST00000490869	GPATCH4	Q5T3I0	446 aa	Known RBP	12.79	□□□□□ -0.36
UBA1-209	ENST00000490869		Q7L0L9	218 aa		12.79	□□□□□ -0.36
UBA1-209	ENST00000490869	EEPD1	Q7L9B9	569 aa		12.79	□□□□□ -0.36
UBA1-209	ENST00000490869	ANKRD33	Q7Z3H0	272 aa		12.79	□□□□□ -0.36
UBA1-209	ENST00000490869	FBXO16	Q8IX29	292 aa	Predicted RBP	12.79	□□□□□ -0.36
UBA1-209	ENST00000490869	PNMA1	Q8ND90	353 aa		12.79	□□□□□ -0.36
UBA1-209	ENST00000490869	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	12.79	□□□□□ -0.36
UBA1-209	ENST00000490869	KAT14	Q9H8E8	782 aa		12.79	□□□□□ -0.36
UBA1-209	ENST00000490869	PNMA2	Q9UL42	364 aa		12.79	□□□□□ -0.36
UBA1-209	ENST00000490869	ELP1	O95163	1332 aa		12.79	□□□□□ -0.36
UBA1-209	ENST00000490869	LCT	P09848	1927 aa		12.78	□□□□□ -0.36
UBA1-209	ENST00000490869	DCDC2C	A8MYV0	355 aa		12.78	□□□□□ -0.36
UBA1-209	ENST00000490869	KIAA0355	O15063	1070 aa		12.78	□□□□□ -0.36
UBA1-209	ENST00000490869	CTAGE5	O15320	804 aa		12.78	□□□□□ -0.36
UBA1-209	ENST00000490869	RAG1	P15918	1043 aa		12.78	□□□□□ -0.36
UBA1-209	ENST00000490869	ITGB8	P26012	769 aa		12.78	□□□□□ -0.36
UBA1-209	ENST00000490869	ALDH5A1	P51649	535 aa	Predicted RBP	12.78	□□□□□ -0.36
UBA1-209	ENST00000490869	NKX3-2	P78367	333 aa		12.78	□□□□□ -0.36
UBA1-209	ENST00000490869	BEX3	Q00994	111 aa		12.78	□□□□□ -0.36
UBA1-209	ENST00000490869	FAAP100	Q0VG06	881 aa		12.78	□□□□□ -0.36
UBA1-209	ENST00000490869	SHH	Q15465	462 aa		12.78	□□□□□ -0.36
UBA1-209	ENST00000490869	TAPT1	Q6NXT6	567 aa		12.78	□□□□□ -0.36
UBA1-209	ENST00000490869	SLC30A10	Q6XR72	485 aa		12.78	□□□□□ -0.36
UBA1-209	ENST00000490869	TLK2	Q86UE8	772 aa		12.78	□□□□□ -0.36
UBA1-209	ENST00000490869	DEFB123	Q8N688	67 aa		12.78	□□□□□ -0.36
UBA1-209	ENST00000490869	MORC4	Q8TE76	937 aa		12.78	□□□□□ -0.36
UBA1-209	ENST00000490869	CLEC4D	Q8WXI8	215 aa		12.78	□□□□□ -0.36
UBA1-209	ENST00000490869	ANKS1A	Q92625	1134 aa		12.78	□□□□□ -0.36
UBA1-209	ENST00000490869	VTI1A	Q96AJ9	217 aa		12.78	□□□□□ -0.36
UBA1-209	ENST00000490869	TOX2	Q96NM4	488 aa		12.78	□□□□□ -0.36
UBA1-209	ENST00000490869	KRT23	Q9C075	422 aa		12.78	□□□□□ -0.36
UBA1-209	ENST00000490869	PDGFC	Q9NRA1	345 aa		12.78	□□□□□ -0.36
UBA1-209	ENST00000490869	TMEM39A	Q9NV64	488 aa		12.78	□□□□□ -0.36
UBA1-209	ENST00000490869	ZSWIM5	Q9P217	1185 aa		12.78	□□□□□ -0.36
UBA1-209	ENST00000490869	ADD3	Q9UEY8	706 aa	Known RBP	12.78	□□□□□ -0.36
UBA1-209	ENST00000490869	GNE	Q9Y223	722 aa	Known RBP	12.78	□□□□□ -0.36
UBA1-209	ENST00000490869	WDR19	Q8NEZ3	1342 aa		12.78	□□□□□ -0.36
UBA1-209	ENST00000490869	RAD50	Q92878	1312 aa		12.78	□□□□□ -0.36
UBA1-209	ENST00000490869		A0A0U1RQG5	324 aa	Predicted RBP	12.77	□□□□□ -0.37
UBA1-209	ENST00000490869	SMPD1	P17405	629 aa		12.77	□□□□□ -0.37
UBA1-209	ENST00000490869	CALML3	P27482	149 aa		12.77	□□□□□ -0.37
UBA1-209	ENST00000490869	C9orf50	Q5SZB4	431 aa		12.77	□□□□□ -0.37
UBA1-209	ENST00000490869	IQSEC1	Q6DN90	963 aa		12.77	□□□□□ -0.37
UBA1-209	ENST00000490869	RNF207	Q6ZRF8	634 aa		12.77	□□□□□ -0.37
UBA1-209	ENST00000490869	ENAH	Q8N8S7	591 aa	Predicted RBP	12.77	□□□□□ -0.37
UBA1-209	ENST00000490869	UBA5	Q9GZZ9	404 aa		12.77	□□□□□ -0.37
UBA1-209	ENST00000490869	AP5M1	Q9H0R1	490 aa		12.77	□□□□□ -0.37
UBA1-209	ENST00000490869	CPVL	Q9H3G5	476 aa		12.77	□□□□□ -0.37
UBA1-209	ENST00000490869	CNNM2	Q9H8M5	875 aa		12.77	□□□□□ -0.37
UBA1-209	ENST00000490869	VTA1	Q9NP79	307 aa		12.77	□□□□□ -0.37
UBA1-209	ENST00000490869	TNKS	O95271	1327 aa		12.77	□□□□□ -0.37
UBA1-209	ENST00000490869	MROH7	Q68CQ1	1323 aa		12.77	□□□□□ -0.37
UBA1-209	ENST00000490869	RANBP2	P49792	3224 aa	Known RBP	12.76	□□□□□ -0.37
UBA1-209	ENST00000490869	LOC102724159	A0A0B4J2E5	919 aa		12.76	□□□□□ -0.37
UBA1-209	ENST00000490869	ARVCF	O00192	962 aa		12.76	□□□□□ -0.37
UBA1-209	ENST00000490869	DYNC1LI2	O43237	492 aa	Predicted RBP	12.76	□□□□□ -0.37
UBA1-209	ENST00000490869	PTGS1	P23219	599 aa		12.76	□□□□□ -0.37
UBA1-209	ENST00000490869	CDK7	P50613	346 aa		12.76	□□□□□ -0.37
UBA1-209	ENST00000490869	RPS6	P62753	249 aa	Known RBP	12.76	□□□□□ -0.37
UBA1-209	ENST00000490869	PWP2	Q15269	919 aa	Known RBP	12.76	□□□□□ -0.37
UBA1-209	ENST00000490869	CDC37	Q16543	378 aa	Predicted RBP	12.76	□□□□□ -0.37
UBA1-209	ENST00000490869	FSCN1	Q16658	493 aa	Known RBP	12.76	□□□□□ -0.37
UBA1-209	ENST00000490869	USH1G	Q495M9	461 aa		12.76	□□□□□ -0.37
UBA1-209	ENST00000490869	ASPRV1	Q53RT3	343 aa		12.76	□□□□□ -0.37

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