RNA–Protein interactions for RNA: ENST00000490814.6

BRD9-209, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,477 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-209ENST00000490814 FAM76AQ8TAV0 307 aa11.33□□□□□ -0.6
BRD9-209ENST00000490814 MICAL1Q8TDZ2 1067 aa11.33□□□□□ -0.6
BRD9-209ENST00000490814 ZKSCAN4Q969J2 545 aaPredicted RBP11.33□□□□□ -0.6
BRD9-209ENST00000490814 CCDC97Q96F63 343 aaPredicted RBP11.33□□□□□ -0.6
BRD9-209ENST00000490814 TTF2Q9UNY4 1162 aaKnown RBP11.33□□□□□ -0.6
BRD9-209ENST00000490814 FAM237AA0A1B0GTK4 181 aa11.32□□□□□ -0.6
BRD9-209ENST00000490814 NMT2O60551 498 aa11.32□□□□□ -0.6
BRD9-209ENST00000490814 GYPCP04921 128 aa11.32□□□□□ -0.6
BRD9-209ENST00000490814 SARSP49591 514 aaKnown RBP11.32□□□□□ -0.6
BRD9-209ENST00000490814 CUL4BQ13620 913 aa11.32□□□□□ -0.6
BRD9-209ENST00000490814 DNAJC14Q6Y2X3 702 aaPredicted RBP11.32□□□□□ -0.6
BRD9-209ENST00000490814 NELFBQ8WX92 580 aa11.32□□□□□ -0.6
BRD9-209ENST00000490814 KIF9Q9HAQ2 790 aa11.32□□□□□ -0.6
BRD9-209ENST00000490814 CD248Q9HCU0 757 aa11.32□□□□□ -0.6
BRD9-209ENST00000490814 ADD3Q9UEY8 706 aaKnown RBP11.32□□□□□ -0.6
BRD9-209ENST00000490814 ANAPC4Q9UJX5 808 aa11.32□□□□□ -0.6
BRD9-209ENST00000490814 SAMM50Q9Y512 469 aa11.32□□□□□ -0.6
BRD9-209ENST00000490814 GGCXP38435 758 aa11.32□□□□□ -0.6
BRD9-209ENST00000490814 DDR1Q08345 913 aa11.32□□□□□ -0.6
BRD9-209ENST00000490814 PDCD2Q16342 344 aaPredicted RBP11.32□□□□□ -0.6
BRD9-209ENST00000490814 BCAS4Q8TDM0 211 aa11.32□□□□□ -0.6
BRD9-209ENST00000490814 GDAQ9Y2T3 454 aa11.32□□□□□ -0.6
BRD9-209ENST00000490814 SHTN1A0MZ66 631 aa11.32□□□□□ -0.6
BRD9-209ENST00000490814 GOLGA6CA6NDK9 693 aa11.32□□□□□ -0.6
BRD9-209ENST00000490814 GOLGA6DP0CG33 693 aa11.32□□□□□ -0.6
BRD9-209ENST00000490814 INPP5BP32019 993 aa11.32□□□□□ -0.6
BRD9-209ENST00000490814 TUBB4BP68371 445 aa11.32□□□□□ -0.6
BRD9-209ENST00000490814 ATP2B2Q01814 1243 aa11.32□□□□□ -0.6
BRD9-209ENST00000490814 PAK1Q13153 545 aa11.32□□□□□ -0.6
BRD9-209ENST00000490814 TUBB2AQ13885 445 aa11.32□□□□□ -0.6
BRD9-209ENST00000490814 PREPLQ4J6C6 727 aaPredicted RBP11.32□□□□□ -0.6
BRD9-209ENST00000490814 RASGRP4Q8TDF6 673 aa11.32□□□□□ -0.6
BRD9-209ENST00000490814 PARD3BQ8TEW8 1205 aa11.32□□□□□ -0.6
BRD9-209ENST00000490814 TUBB2BQ9BVA1 445 aa11.32□□□□□ -0.6
BRD9-209ENST00000490814 EHD4Q9H223 541 aa11.32□□□□□ -0.6
BRD9-209ENST00000490814 KDM4CQ9H3R0 1056 aa11.32□□□□□ -0.6
BRD9-209ENST00000490814 GOLGA6AQ9NYA3 693 aa11.32□□□□□ -0.6
BRD9-209ENST00000490814 MROH5Q6ZUA9 1318 aa11.31□□□□□ -0.6
BRD9-209ENST00000490814 TRIM49BA6NDI0 452 aa11.31□□□□□ -0.6
BRD9-209ENST00000490814 KCNJ18B7U540 433 aa11.31□□□□□ -0.6
BRD9-209ENST00000490814 GNAT2P19087 354 aa11.31□□□□□ -0.6
BRD9-209ENST00000490814 NAP1L1P55209 391 aaKnown RBP11.31□□□□□ -0.6
BRD9-209ENST00000490814 DPYDQ12882 1025 aa11.31□□□□□ -0.6
BRD9-209ENST00000490814 KCNJ12Q14500 433 aa11.31□□□□□ -0.6
BRD9-209ENST00000490814 CC2D2BQ6DHV5 1058 aa11.31□□□□□ -0.6
BRD9-209ENST00000490814 VGLL2Q8N8G2 317 aa11.31□□□□□ -0.6
BRD9-209ENST00000490814 ENAHQ8N8S7 591 aaPredicted RBP11.31□□□□□ -0.6
BRD9-209ENST00000490814 CHP1Q99653 195 aa11.31□□□□□ -0.6
BRD9-209ENST00000490814 PLA2G12BQ9BX93 195 aa11.31□□□□□ -0.6
BRD9-209ENST00000490814 NAA15Q9BXJ9 866 aaKnown RBP11.31□□□□□ -0.6
BRD9-209ENST00000490814 PLCH1Q4KWH8 1693 aa11.31□□□□□ -0.6
BRD9-209ENST00000490814 DISP2A7MBM2 1401 aa11.31□□□□□ -0.6
BRD9-209ENST00000490814 ABCC12Q96J65 1359 aa11.31□□□□□ -0.6
BRD9-209ENST00000490814 WTIPA6NIX2 430 aaPredicted RBP11.31□□□□□ -0.6
BRD9-209ENST00000490814 PEX19P40855 299 aa11.31□□□□□ -0.6
BRD9-209ENST00000490814 STAT6P42226 847 aa11.31□□□□□ -0.6
BRD9-209ENST00000490814 MATR3P43243 847 aaKnown RBP eCLIP11.31□□□□□ -0.6
BRD9-209ENST00000490814 MRPL12P52815 198 aaKnown RBP11.31□□□□□ -0.6
BRD9-209ENST00000490814 COPB1P53618 953 aaKnown RBP11.31□□□□□ -0.6
BRD9-209ENST00000490814 ALX1Q15699 326 aa11.31□□□□□ -0.6
BRD9-209ENST00000490814 TMTC1Q8IUR5 882 aa11.31□□□□□ -0.6
BRD9-209ENST00000490814 ZNF579Q8NAF0 562 aaKnown RBP11.31□□□□□ -0.6
BRD9-209ENST00000490814 TRIM47Q96LD4 638 aa11.31□□□□□ -0.6
BRD9-209ENST00000490814 ZSCAN10Q96SZ4 725 aaPredicted RBP11.31□□□□□ -0.6
BRD9-209ENST00000490814 AATFQ9NY61 560 aaKnown RBP eCLIP11.31□□□□□ -0.62e-7■■■■■ 46.1
BRD9-209ENST00000490814 MAGEC2Q9UBF1 373 aaPredicted RBP11.31□□□□□ -0.6
BRD9-209ENST00000490814 FAM169AQ9Y6X4 670 aa11.31□□□□□ -0.6
BRD9-209ENST00000490814 BCL9O00512 1426 aa11.31□□□□□ -0.6
BRD9-209ENST00000490814 RTN2O75298 545 aa11.3□□□□□ -0.6
BRD9-209ENST00000490814 TUBBP07437 444 aa11.3□□□□□ -0.6
BRD9-209ENST00000490814 NEFHP12036 1026 aa11.3□□□□□ -0.6
BRD9-209ENST00000490814 MRPS25P82663 173 aaKnown RBP11.3□□□□□ -0.6
BRD9-209ENST00000490814 CCDC122Q5T0U0 273 aa11.3□□□□□ -0.6
BRD9-209ENST00000490814 CYP26C1Q6V0L0 522 aa11.3□□□□□ -0.6
BRD9-209ENST00000490814 RASGRP2Q7LDG7 609 aa11.3□□□□□ -0.6
BRD9-209ENST00000490814 GSDMAQ96QA5 445 aa11.3□□□□□ -0.6
BRD9-209ENST00000490814 SCN11AQ9UI33 1791 aa11.3□□□□□ -0.6
BRD9-209ENST00000490814 USP17L12C9JPN9 530 aa11.3□□□□□ -0.6
BRD9-209ENST00000490814 USP17L21D6R901 530 aa11.3□□□□□ -0.6
BRD9-209ENST00000490814 RNF225M0QZC1 329 aaPredicted RBP11.3□□□□□ -0.6
BRD9-209ENST00000490814 SKAP2O75563 359 aaPredicted RBP11.3□□□□□ -0.6
BRD9-209ENST00000490814 SYF2O95926 243 aaKnown RBP11.3□□□□□ -0.6
BRD9-209ENST00000490814 SETSIPP0DME0 302 aa11.3□□□□□ -0.6
BRD9-209ENST00000490814 ERVK-24P63145 666 aa11.3□□□□□ -0.6
BRD9-209ENST00000490814 PPARDQ03181 441 aa11.3□□□□□ -0.6
BRD9-209ENST00000490814 SUSD4Q5VX71 490 aa11.3□□□□□ -0.6
BRD9-209ENST00000490814 ADGRA1Q86SQ6 560 aa11.3□□□□□ -0.6
BRD9-209ENST00000490814 RNF26Q9BY78 433 aaPredicted RBP11.3□□□□□ -0.6
BRD9-209ENST00000490814 KAT14Q9H8E8 782 aa11.3□□□□□ -0.6
BRD9-209ENST00000490814 MACROD2A1Z1Q3 448 aa11.3□□□□□ -0.6
BRD9-209ENST00000490814 PPP1R3GB7ZBB8 358 aa11.3□□□□□ -0.6
BRD9-209ENST00000490814 TRIM21P19474 475 aaKnown RBP11.3□□□□□ -0.6
BRD9-209ENST00000490814 ABCD1P33897 745 aa11.3□□□□□ -0.6
BRD9-209ENST00000490814 SNX1Q13596 522 aa11.3□□□□□ -0.6
BRD9-209ENST00000490814 COL23A1Q86Y22 540 aaPredicted RBP11.3□□□□□ -0.6
BRD9-209ENST00000490814 GPKOWQ92917 476 aaPredicted RBP eCLIP11.3□□□□□ -0.6
BRD9-209ENST00000490814 FERMT2Q96AC1 680 aa11.3□□□□□ -0.6
BRD9-209ENST00000490814 ZBTB10Q96DT7 871 aa11.3□□□□□ -0.6
BRD9-209ENST00000490814 RUFY1Q96T51 708 aa11.3□□□□□ -0.6
BRD9-209ENST00000490814 CENPHQ9H3R5 247 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms