RNA–Protein interactions for RNA: ENST00000490716.5

SUPT20H-220, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 3,811 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-220ENST00000490716 SLC16A2P36021 539 aa10.78□□□□□ -0.68
SUPT20H-220ENST00000490716 TINF2Q9BSI4 451 aa10.78□□□□□ -0.68
SUPT20H-220ENST00000490716 CLK2P49760 499 aaKnown RBP10.77□□□□□ -0.68
SUPT20H-220ENST00000490716 SRBD1Q8N5C6 995 aaKnown RBP10.77□□□□□ -0.68
SUPT20H-220ENST00000490716 CNTNAP5Q8WYK1 1306 aa10.77□□□□□ -0.69
SUPT20H-220ENST00000490716 ARID2Q68CP9 1835 aa10.77□□□□□ -0.69
SUPT20H-220ENST00000490716 PIK3CDO00329 1044 aa10.77□□□□□ -0.69
SUPT20H-220ENST00000490716 RGS20O76081 388 aa10.77□□□□□ -0.69
SUPT20H-220ENST00000490716 SEC24BO95487 1268 aa10.77□□□□□ -0.69
SUPT20H-220ENST00000490716 FCER1AP12319 257 aa10.77□□□□□ -0.69
SUPT20H-220ENST00000490716 MMP19Q99542 508 aa10.77□□□□□ -0.69
SUPT20H-220ENST00000490716 MAP3K20Q9NYL2 800 aaKnown RBP10.77□□□□□ -0.69
SUPT20H-220ENST00000490716 STX8Q9UNK0 236 aa10.77□□□□□ -0.69
SUPT20H-220ENST00000490716 ATG2AQ2TAZ0 1938 aa10.77□□□□□ -0.69
SUPT20H-220ENST00000490716 PGK2P07205 417 aa10.77□□□□□ -0.69
SUPT20H-220ENST00000490716 KIFC2Q96AC6 838 aa10.77□□□□□ -0.69
SUPT20H-220ENST00000490716 CPVLQ9H3G5 476 aa10.77□□□□□ -0.69
SUPT20H-220ENST00000490716 DDX20Q9UHI6 824 aaKnown RBP10.77□□□□□ -0.69
SUPT20H-220ENST00000490716 SEPT4O43236 478 aa10.76□□□□□ -0.69
SUPT20H-220ENST00000490716 SNAP25P60880 206 aa10.76□□□□□ -0.69
SUPT20H-220ENST00000490716 SLC30A10Q6XR72 485 aa10.76□□□□□ -0.69
SUPT20H-220ENST00000490716 FBXO40Q9UH90 709 aa10.76□□□□□ -0.69
SUPT20H-220ENST00000490716 CCDC85CA6NKD9 419 aa10.76□□□□□ -0.69
SUPT20H-220ENST00000490716 CYP2B6P20813 491 aa10.76□□□□□ -0.69
SUPT20H-220ENST00000490716 CNTN2Q02246 1040 aa10.76□□□□□ -0.69
SUPT20H-220ENST00000490716 CCDC62Q6P9F0 684 aa10.76□□□□□ -0.69
SUPT20H-220ENST00000490716 DIS3LQ8TF46 1054 aaKnown RBP10.76□□□□□ -0.69
SUPT20H-220ENST00000490716 VWCEQ96DN2 955 aa10.76□□□□□ -0.69
SUPT20H-220ENST00000490716 TRERF1Q96PN7 1200 aa10.76□□□□□ -0.69
SUPT20H-220ENST00000490716 PURBQ96QR8 312 aaKnown RBP10.76□□□□□ -0.69
SUPT20H-220ENST00000490716 ACAD9Q9H845 621 aa10.76□□□□□ -0.69
SUPT20H-220ENST00000490716 CHD7Q9P2D1 2997 aa10.76□□□□□ -0.69
SUPT20H-220ENST00000490716 M0R2N6 131 aa10.76□□□□□ -0.69
SUPT20H-220ENST00000490716 TMEM63BQ5T3F8 832 aa10.76□□□□□ -0.69
SUPT20H-220ENST00000490716 IQCA1Q86XH1 822 aa10.76□□□□□ -0.69
SUPT20H-220ENST00000490716 TEX2Q8IWB9 1127 aa10.76□□□□□ -0.69
SUPT20H-220ENST00000490716 PHF24Q9UPV7 400 aa10.76□□□□□ -0.69
SUPT20H-220ENST00000490716 COL4A6Q14031 1691 aa10.76□□□□□ -0.69
SUPT20H-220ENST00000490716 GOLGA8HP0CJ92 632 aa10.75□□□□□ -0.69
SUPT20H-220ENST00000490716 QRICH1Q2TAL8 776 aa10.75□□□□□ -0.69
SUPT20H-220ENST00000490716 DHX32Q7L7V1 743 aaKnown RBP10.75□□□□□ -0.69
SUPT20H-220ENST00000490716 ADAMTS3O15072 1205 aa10.75□□□□□ -0.69
SUPT20H-220ENST00000490716 PRC1O43663 620 aa10.75□□□□□ -0.69
SUPT20H-220ENST00000490716 ZBED4O75132 1171 aa10.75□□□□□ -0.69
SUPT20H-220ENST00000490716 ZKSCAN1P17029 563 aaPredicted RBP10.75□□□□□ -0.69
SUPT20H-220ENST00000490716 CYP2C19P33261 490 aa10.75□□□□□ -0.69
SUPT20H-220ENST00000490716 PKN1Q16512 942 aa10.75□□□□□ -0.69
SUPT20H-220ENST00000490716 APOA5Q6Q788 366 aa10.75□□□□□ -0.69
SUPT20H-220ENST00000490716 ZNF654Q8IZM8 581 aa10.75□□□□□ -0.69
SUPT20H-220ENST00000490716 DNERQ8NFT8 737 aa10.75□□□□□ -0.69
SUPT20H-220ENST00000490716 Q9Y3F1 56 aa10.75□□□□□ -0.69
SUPT20H-220ENST00000490716 ABCB11O95342 1321 aa10.75□□□□□ -0.69
SUPT20H-220ENST00000490716 MEIS2O14770 477 aa10.75□□□□□ -0.69
SUPT20H-220ENST00000490716 ZBTB5O15062 677 aa10.75□□□□□ -0.69
SUPT20H-220ENST00000490716 MCM5P33992 734 aa10.75□□□□□ -0.69
SUPT20H-220ENST00000490716 CDK7P50613 346 aa10.75□□□□□ -0.69
SUPT20H-220ENST00000490716 CDC37Q16543 378 aaPredicted RBP10.75□□□□□ -0.69
SUPT20H-220ENST00000490716 IFIT1BQ5T764 474 aaKnown RBP10.75□□□□□ -0.69
SUPT20H-220ENST00000490716 TMTC3Q6ZXV5 915 aa10.75□□□□□ -0.69
SUPT20H-220ENST00000490716 CHST3Q7LGC8 479 aa10.75□□□□□ -0.69
SUPT20H-220ENST00000490716 TBC1D5Q92609 795 aa10.75□□□□□ -0.69
SUPT20H-220ENST00000490716 EMID1Q96A84 441 aaPredicted RBP10.75□□□□□ -0.69
SUPT20H-220ENST00000490716 PNMA2Q9UL42 364 aa10.75□□□□□ -0.69
SUPT20H-220ENST00000490716 COL6A3P12111 3177 aa10.74□□□□□ -0.69
SUPT20H-220ENST00000490716 DNM1LO00429 736 aa10.74□□□□□ -0.69
SUPT20H-220ENST00000490716 CDC27P30260 824 aa10.74□□□□□ -0.69
SUPT20H-220ENST00000490716 GJA9P57773 515 aa10.74□□□□□ -0.69
SUPT20H-220ENST00000490716 ST3GAL1Q11201 340 aa10.74□□□□□ -0.69
SUPT20H-220ENST00000490716 NPY5RQ15761 445 aa10.74□□□□□ -0.69
SUPT20H-220ENST00000490716 TYW1BQ6NUM6 668 aa10.74□□□□□ -0.69
SUPT20H-220ENST00000490716 RNF146Q9NTX7 359 aa10.74□□□□□ -0.69
SUPT20H-220ENST00000490716 RPS6KB1P23443 525 aa10.74□□□□□ -0.69
SUPT20H-220ENST00000490716 ALDH5A1P51649 535 aaPredicted RBP10.74□□□□□ -0.69
SUPT20H-220ENST00000490716 UBXN2AP68543 259 aa10.74□□□□□ -0.69
SUPT20H-220ENST00000490716 NEK1Q96PY6 1258 aa10.74□□□□□ -0.69
SUPT20H-220ENST00000490716 HMX1Q9NP08 348 aaPredicted RBP10.74□□□□□ -0.69
SUPT20H-220ENST00000490716 SYNRGQ9UMZ2 1314 aa10.74□□□□□ -0.69
SUPT20H-220ENST00000490716 HOXC8P31273 242 aa10.74□□□□□ -0.69
SUPT20H-220ENST00000490716 CCDC144CPQ8IYA2 1237 aa10.74□□□□□ -0.69
SUPT20H-220ENST00000490716 SYTL5Q8TDW5 730 aaPredicted RBP10.74□□□□□ -0.69
SUPT20H-220ENST00000490716 CTAGE1Q96RT6 745 aa10.74□□□□□ -0.69
SUPT20H-220ENST00000490716 SCN5AQ14524 2016 aa10.74□□□□□ -0.69
SUPT20H-220ENST00000490716 KLRF2D3W0D1 207 aa10.73□□□□□ -0.69
SUPT20H-220ENST00000490716 PLEKHA8P1O95397 391 aa10.73□□□□□ -0.69
SUPT20H-220ENST00000490716 RRP12Q5JTH9 1297 aaKnown RBP10.73□□□□□ -0.69
SUPT20H-220ENST00000490716 ARMCX2Q7L311 632 aa10.73□□□□□ -0.69
SUPT20H-220ENST00000490716 NCAPG2Q86XI2 1143 aa10.73□□□□□ -0.69
SUPT20H-220ENST00000490716 UBA5Q9GZZ9 404 aa10.73□□□□□ -0.69
SUPT20H-220ENST00000490716 GRIN2DO15399 1336 aa10.73□□□□□ -0.69
SUPT20H-220ENST00000490716 XIRP2A4UGR9 3374 aa10.73□□□□□ -0.69
SUPT20H-220ENST00000490716 KAT14Q9H8E8 782 aa10.73□□□□□ -0.69
SUPT20H-220ENST00000490716 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.73□□□□□ -0.69
SUPT20H-220ENST00000490716 MYADML2A6NDP7 307 aa10.73□□□□□ -0.69
SUPT20H-220ENST00000490716 PARP1P09874 1014 aaKnown RBP10.73□□□□□ -0.69
SUPT20H-220ENST00000490716 MLLT1Q03111 559 aaPredicted RBP10.73□□□□□ -0.69
SUPT20H-220ENST00000490716 PRAMEF19Q5SWL8 479 aa10.73□□□□□ -0.69
SUPT20H-220ENST00000490716 GPCPD1Q9NPB8 672 aa10.73□□□□□ -0.69
SUPT20H-220ENST00000490716 DDX49Q9Y6V7 483 aaKnown RBP10.73□□□□□ -0.69
SUPT20H-220ENST00000490716 LOXHD1Q8IVV2 1947 aa10.73□□□□□ -0.69
SUPT20H-220ENST00000490716 PNMA6FA0A0J9YX94 578 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms