RNA–Protein interactions for RNA: ENST00000490663.1

C4A-256, Transcript of complement C4A (Rodgers blood group), human

TSL 2

Gene C4A, Length 524 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C4A-256	ENST00000490663	DDAH1	O94760	285 aa		21.62	■■□□□ 1.05
C4A-256	ENST00000490663	LIFR	P42702	1097 aa		21.62	■■□□□ 1.05
C4A-256	ENST00000490663	MAP3K21	Q5TCX8	1036 aa		21.62	■■□□□ 1.05
C4A-256	ENST00000490663	MFSD14C	Q5VZR4	134 aa		21.62	■■□□□ 1.05
C4A-256	ENST00000490663	SLC30A10	Q6XR72	485 aa		21.62	■■□□□ 1.05
C4A-256	ENST00000490663		Q6ZUG5	572 aa		21.62	■■□□□ 1.05
C4A-256	ENST00000490663	PIGS	Q96S52	555 aa		21.62	■■□□□ 1.05
C4A-256	ENST00000490663	FBXO40	Q9UH90	709 aa		21.62	■■□□□ 1.05
C4A-256	ENST00000490663	NAP1L2	Q9ULW6	460 aa	Predicted RBP	21.62	■■□□□ 1.05
C4A-256	ENST00000490663	WDR19	Q8NEZ3	1342 aa		21.61	■■□□□ 1.05
C4A-256	ENST00000490663	APOBR	Q0VD83	1088 aa		21.61	■■□□□ 1.05
C4A-256	ENST00000490663	TKFC	Q3LXA3	575 aa		21.61	■■□□□ 1.05
C4A-256	ENST00000490663	ANO1	Q5XXA6	986 aa		21.61	■■□□□ 1.05
C4A-256	ENST00000490663	TRMT44	Q8IYL2	757 aa	Known RBP	21.61	■■□□□ 1.05
C4A-256	ENST00000490663	CTCFL	Q8NI51	663 aa	Predicted RBP	21.61	■■□□□ 1.05
C4A-256	ENST00000490663	CLEC4D	Q8WXI8	215 aa		21.61	■■□□□ 1.05
C4A-256	ENST00000490663	MTA3	Q9BTC8	594 aa		21.61	■■□□□ 1.05
C4A-256	ENST00000490663	HMX1	Q9NP08	348 aa	Predicted RBP	21.61	■■□□□ 1.05
C4A-256	ENST00000490663	SLC12A7	Q9Y666	1083 aa		21.61	■■□□□ 1.05
C4A-256	ENST00000490663	ASTN1	O14525	1302 aa		21.6	■■□□□ 1.05
C4A-256	ENST00000490663	RPTOR	Q8N122	1335 aa		21.6	■■□□□ 1.05
C4A-256	ENST00000490663	KLF18	A0A0U1RQI7	1052 aa		21.6	■■□□□ 1.05
C4A-256	ENST00000490663	RPS6KB1	P23443	525 aa		21.6	■■□□□ 1.05
C4A-256	ENST00000490663	CNGA1	P29973	690 aa		21.6	■■□□□ 1.05
C4A-256	ENST00000490663	C8orf34	Q49A92	452 aa		21.6	■■□□□ 1.05
C4A-256	ENST00000490663	OLFML2B	Q68BL8	750 aa		21.6	■■□□□ 1.05
C4A-256	ENST00000490663	APOA5	Q6Q788	366 aa		21.6	■■□□□ 1.05
C4A-256	ENST00000490663	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	21.6	■■□□□ 1.05
C4A-256	ENST00000490663	SGMS1	Q86VZ5	419 aa		21.6	■■□□□ 1.05
C4A-256	ENST00000490663	U2AF1L4	Q8WU68	220 aa	Known RBP	21.6	■■□□□ 1.05
C4A-256	ENST00000490663	UPF3B	Q9BZI7	483 aa	Known RBP	21.6	■■□□□ 1.05
C4A-256	ENST00000490663	PAK6	Q9NQU5	681 aa	Predicted RBP	21.6	■■□□□ 1.05
C4A-256	ENST00000490663	SLC5A4	Q9NY91	659 aa		21.6	■■□□□ 1.05
C4A-256	ENST00000490663	MKI67	P46013	3256 aa	Known RBP	21.6	■■□□□ 1.05
C4A-256	ENST00000490663	hCG_1642624	A0A1W2PR95	340 aa		21.59	■■□□□ 1.05
C4A-256	ENST00000490663	PTPDC1	A2A3K4	754 aa		21.59	■■□□□ 1.05
C4A-256	ENST00000490663	SOWAHB	A6NEL2	793 aa		21.59	■■□□□ 1.05
C4A-256	ENST00000490663	POTEB2	H3BUK9	544 aa		21.59	■■□□□ 1.05
C4A-256	ENST00000490663	IGHA2	P01877	340 aa		21.59	■■□□□ 1.05
C4A-256	ENST00000490663	GJB1	P08034	283 aa		21.59	■■□□□ 1.05
C4A-256	ENST00000490663	CYBA	P13498	195 aa		21.59	■■□□□ 1.05
C4A-256	ENST00000490663	FGD1	P98174	961 aa		21.59	■■□□□ 1.05
C4A-256	ENST00000490663	BAAT	Q14032	418 aa	Predicted RBP	21.59	■■□□□ 1.05
C4A-256	ENST00000490663	FBXO11	Q86XK2	927 aa		21.59	■■□□□ 1.05
C4A-256	ENST00000490663	CCDC82	Q8N4S0	544 aa		21.59	■■□□□ 1.05
C4A-256	ENST00000490663	TBC1D5	Q92609	795 aa		21.59	■■□□□ 1.05
C4A-256	ENST00000490663	BRF1	Q92994	677 aa		21.59	■■□□□ 1.05
C4A-256	ENST00000490663	LARP6	Q9BRS8	491 aa	Known RBP	21.59	■■□□□ 1.05
C4A-256	ENST00000490663	CYP39A1	Q9NYL5	469 aa		21.59	■■□□□ 1.05
C4A-256	ENST00000490663	CALML3	P27482	149 aa		21.58	■■□□□ 1.05
C4A-256	ENST00000490663	TMTC2	Q8N394	836 aa		21.58	■■□□□ 1.05
C4A-256	ENST00000490663	SRBD1	Q8N5C6	995 aa	Known RBP	21.58	■■□□□ 1.05
C4A-256	ENST00000490663	FAM133A	Q8N9E0	248 aa		21.58	■■□□□ 1.05
C4A-256	ENST00000490663	MTMR8	Q96EF0	704 aa		21.58	■■□□□ 1.05
C4A-256	ENST00000490663	TINF2	Q9BSI4	451 aa		21.58	■■□□□ 1.05
C4A-256	ENST00000490663	RIOX1	Q9H6W3	641 aa		21.58	■■□□□ 1.05
C4A-256	ENST00000490663	HMGB1	P09429	215 aa	Known RBP	21.57	■■□□□ 1.04
C4A-256	ENST00000490663	GJA8	P48165	433 aa		21.57	■■□□□ 1.04
C4A-256	ENST00000490663	LENG1	Q96BZ8	264 aa	Predicted RBP	21.57	■■□□□ 1.04
C4A-256	ENST00000490663	PFAS	O15067	1338 aa		21.56	■■□□□ 1.04
C4A-256	ENST00000490663	ABCB11	O95342	1321 aa		21.56	■■□□□ 1.04
C4A-256	ENST00000490663	GOLGA8A	A7E2F4	631 aa		21.56	■■□□□ 1.04
C4A-256	ENST00000490663	GOLGA8B	A8MQT2	603 aa		21.56	■■□□□ 1.04
C4A-256	ENST00000490663	ZBTB5	O15062	677 aa		21.56	■■□□□ 1.04
C4A-256	ENST00000490663	ZBTB43	O43298	467 aa		21.56	■■□□□ 1.04
C4A-256	ENST00000490663	EPB41L2	O43491	1005 aa	Known RBP	21.56	■■□□□ 1.04
C4A-256	ENST00000490663	SGPL1	O95470	568 aa		21.56	■■□□□ 1.04
C4A-256	ENST00000490663	PSMA5	P28066	241 aa		21.56	■■□□□ 1.04
C4A-256	ENST00000490663	KIF5B	P33176	963 aa		21.56	■■□□□ 1.04
C4A-256	ENST00000490663	DIS3	Q9Y2L1	958 aa	Known RBP	21.56	■■□□□ 1.04
C4A-256	ENST00000490663	SNAI1	O95863	264 aa	Predicted RBP	21.55	■■□□□ 1.04
C4A-256	ENST00000490663	TFRC	P02786	760 aa	Known RBP	21.55	■■□□□ 1.04
C4A-256	ENST00000490663	CALM1	P0DP23	149 aa		21.55	■■□□□ 1.04
C4A-256	ENST00000490663	CALM2	P0DP24	149 aa		21.55	■■□□□ 1.04
C4A-256	ENST00000490663	CALM3	P0DP25	149 aa		21.55	■■□□□ 1.04
C4A-256	ENST00000490663	SYNE3	Q6ZMZ3	975 aa		21.55	■■□□□ 1.04
C4A-256	ENST00000490663	RNF207	Q6ZRF8	634 aa		21.55	■■□□□ 1.04
C4A-256	ENST00000490663	TMTC3	Q6ZXV5	915 aa		21.55	■■□□□ 1.04
C4A-256	ENST00000490663	RUFY3	Q7L099	469 aa		21.55	■■□□□ 1.04
C4A-256	ENST00000490663	ARMCX2	Q7L311	632 aa		21.55	■■□□□ 1.04
C4A-256	ENST00000490663	FANCB	Q8NB91	859 aa		21.55	■■□□□ 1.04
C4A-256	ENST00000490663	MAP3K14	Q99558	947 aa		21.55	■■□□□ 1.04
C4A-256	ENST00000490663	AMN	Q9BXJ7	453 aa		21.55	■■□□□ 1.04
C4A-256	ENST00000490663	ZSWIM6	Q9HCJ5	1215 aa		21.55	■■□□□ 1.04
C4A-256	ENST00000490663	CNTNAP5	Q8WYK1	1306 aa		21.55	■■□□□ 1.04
C4A-256	ENST00000490663	OPLAH	O14841	1288 aa		21.54	■■□□□ 1.04
C4A-256	ENST00000490663	CDC27	P30260	824 aa		21.54	■■□□□ 1.04
C4A-256	ENST00000490663	RGS19	P49795	217 aa		21.54	■■□□□ 1.04
C4A-256	ENST00000490663	RPS6	P62753	249 aa	Known RBP	21.54	■■□□□ 1.04
C4A-256	ENST00000490663	TOB2	Q14106	344 aa	Predicted RBP	21.54	■■□□□ 1.04
C4A-256	ENST00000490663	RTN1	Q16799	776 aa		21.54	■■□□□ 1.04
C4A-256	ENST00000490663	DIS3L	Q8TF46	1054 aa	Known RBP	21.54	■■□□□ 1.04
C4A-256	ENST00000490663	SPZ1	Q9BXG8	430 aa		21.54	■■□□□ 1.04
C4A-256	ENST00000490663	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	21.54	■■□□□ 1.04
C4A-256	ENST00000490663	COL20A1	Q9P218	1284 aa		21.54	■■□□□ 1.04
C4A-256	ENST00000490663	ZHX1	Q9UKY1	873 aa	Predicted RBP	21.54	■■□□□ 1.04
C4A-256	ENST00000490663	PCDHA1	Q9Y5I3	950 aa		21.54	■■□□□ 1.04
C4A-256	ENST00000490663	CYP46A1	Q9Y6A2	500 aa		21.54	■■□□□ 1.04
C4A-256	ENST00000490663	DNAH12	Q6ZR08	3092 aa		21.52	■■□□□ 1.04
C4A-256	ENST00000490663	PNMA6F	A0A0J9YX94	578 aa		21.52	■■□□□ 1.04

Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms