RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 ADMP35318 185 aa6.11□□□□□ -1.43
CSTF1-205ENST00000490539 ETF1P62495 437 aaKnown RBP6.11□□□□□ -1.43
CSTF1-205ENST00000490539 TAGLNQ01995 201 aaKnown RBP6.11□□□□□ -1.43
CSTF1-205ENST00000490539 TSNAXIP1Q2TAA8 658 aa6.11□□□□□ -1.43
CSTF1-205ENST00000490539 IFNL2Q8IZJ0 200 aa6.11□□□□□ -1.43
CSTF1-205ENST00000490539 MARCH10Q8NA82 808 aaPredicted RBP6.11□□□□□ -1.43
CSTF1-205ENST00000490539 ISL2Q96A47 359 aa6.11□□□□□ -1.43
CSTF1-205ENST00000490539 PDGFDQ9GZP0 370 aaPredicted RBP6.11□□□□□ -1.43
CSTF1-205ENST00000490539 LRRC4CQ9HCJ2 640 aa6.11□□□□□ -1.43
CSTF1-205ENST00000490539 C1GALT1Q9NS00 363 aa6.11□□□□□ -1.43
CSTF1-205ENST00000490539 BCL9O00512 1426 aa6.1□□□□□ -1.43
CSTF1-205ENST00000490539 PLSCR1O15162 318 aa6.1□□□□□ -1.43
CSTF1-205ENST00000490539 ZBTB7AO95365 584 aa6.1□□□□□ -1.43
CSTF1-205ENST00000490539 CTSHP09668 335 aa6.1□□□□□ -1.43
CSTF1-205ENST00000490539 FAM87AP0C7U9 286 aa6.1□□□□□ -1.43
CSTF1-205ENST00000490539 JAG1P78504 1218 aa6.1□□□□□ -1.43
CSTF1-205ENST00000490539 CDK5R2Q13319 367 aa6.1□□□□□ -1.43
CSTF1-205ENST00000490539 ZBTB37Q5TC79 503 aa6.1□□□□□ -1.43
CSTF1-205ENST00000490539 RASIP1Q5U651 963 aa6.1□□□□□ -1.43
CSTF1-205ENST00000490539 ERICH6BQ5W0A0 696 aa6.1□□□□□ -1.43
CSTF1-205ENST00000490539 SULT6B1Q6IMI4 303 aa6.1□□□□□ -1.43
CSTF1-205ENST00000490539 SEZ6L2Q6UXD5 910 aa6.1□□□□□ -1.43
CSTF1-205ENST00000490539 ZNF765Q7L2R6 523 aa6.1□□□□□ -1.43
CSTF1-205ENST00000490539 CCDC84Q86UT8 332 aaPredicted RBP6.1□□□□□ -1.43
CSTF1-205ENST00000490539 JARID2Q92833 1246 aaPredicted RBP6.1□□□□□ -1.43
CSTF1-205ENST00000490539 ANGEL1Q9UNK9 670 aaKnown RBP6.1□□□□□ -1.43
CSTF1-205ENST00000490539 TACC3Q9Y6A5 838 aa6.1□□□□□ -1.43
CSTF1-205ENST00000490539 IGSF1Q8N6C5 1336 aa6.09□□□□□ -1.43
CSTF1-205ENST00000490539 DYNC1LI2O43237 492 aaPredicted RBP6.09□□□□□ -1.43
CSTF1-205ENST00000490539 TOMM70O94826 608 aa6.09□□□□□ -1.43
CSTF1-205ENST00000490539 U2AF1L5P0DN76 240 aaPredicted RBP6.09□□□□□ -1.43
CSTF1-205ENST00000490539 PPP2R1AP30153 589 aa6.09□□□□□ -1.43
CSTF1-205ENST00000490539 GBP2P32456 591 aaPredicted RBP6.09□□□□□ -1.43
CSTF1-205ENST00000490539 U2AF1Q01081 240 aaKnown RBP eCLIP6.09□□□□□ -1.43
CSTF1-205ENST00000490539 PDE4BQ07343 736 aa6.09□□□□□ -1.43
CSTF1-205ENST00000490539 SEPT6Q14141 434 aa6.09□□□□□ -1.43
CSTF1-205ENST00000490539 WIPI1Q5MNZ9 446 aaPredicted RBP6.09□□□□□ -1.43
CSTF1-205ENST00000490539 ZNF530Q6P9A1 599 aaPredicted RBP6.09□□□□□ -1.43
CSTF1-205ENST00000490539 LRFN4Q6PJG9 635 aa6.09□□□□□ -1.43
CSTF1-205ENST00000490539 CYFIP1Q7L576 1253 aa6.09□□□□□ -1.43
CSTF1-205ENST00000490539 DTX1Q86Y01 620 aa6.09□□□□□ -1.43
CSTF1-205ENST00000490539 SMARCC1Q92922 1105 aaPredicted RBP6.09□□□□□ -1.43
CSTF1-205ENST00000490539 PLPPR2Q96GM1 343 aa6.09□□□□□ -1.43
CSTF1-205ENST00000490539 RSRP1Q9BUV0 290 aa6.09□□□□□ -1.43
CSTF1-205ENST00000490539 TMOD3Q9NYL9 352 aa6.09□□□□□ -1.43
CSTF1-205ENST00000490539 LRRC37A3O60309 1634 aa6.08□□□□□ -1.44
CSTF1-205ENST00000490539 ZNF16P17020 682 aaPredicted RBP6.08□□□□□ -1.44
CSTF1-205ENST00000490539 IL13P35225 146 aa6.08□□□□□ -1.44
CSTF1-205ENST00000490539 RING1Q06587 406 aa6.08□□□□□ -1.44
CSTF1-205ENST00000490539 INPP5AQ14642 412 aa6.08□□□□□ -1.44
CSTF1-205ENST00000490539 WDR43Q15061 677 aaKnown RBP eCLIP6.08□□□□□ -1.44
CSTF1-205ENST00000490539 HS2ST1Q7LGA3 356 aa6.08□□□□□ -1.44
CSTF1-205ENST00000490539 HID1Q8IV36 788 aa6.08□□□□□ -1.44
CSTF1-205ENST00000490539 RTF1Q92541 710 aaKnown RBP6.08□□□□□ -1.44
CSTF1-205ENST00000490539 GATA6Q92908 595 aa6.08□□□□□ -1.44
CSTF1-205ENST00000490539 GAL3ST3Q96A11 431 aa6.08□□□□□ -1.44
CSTF1-205ENST00000490539 WNT10AQ9GZT5 417 aa6.08□□□□□ -1.44
CSTF1-205ENST00000490539 PRDM10Q9NQV6 1147 aa6.08□□□□□ -1.44
CSTF1-205ENST00000490539 BSDC1Q9NW68 430 aaPredicted RBP6.08□□□□□ -1.44
CSTF1-205ENST00000490539 GTF2IRD1Q9UHL9 959 aa6.08□□□□□ -1.44
CSTF1-205ENST00000490539 ADGRE2Q9UHX3 823 aa6.08□□□□□ -1.44
CSTF1-205ENST00000490539 PCDHB5Q9Y5E4 795 aa6.08□□□□□ -1.44
CSTF1-205ENST00000490539 CACNA1AO00555 2505 aa6.08□□□□□ -1.44
CSTF1-205ENST00000490539 MYBBP1AQ9BQG0 1328 aaKnown RBP6.07□□□□□ -1.44
CSTF1-205ENST00000490539 MAPK8IP3Q9UPT6 1336 aa6.07□□□□□ -1.44
CSTF1-205ENST00000490539 ERVV-2B6SEH9 535 aa6.07□□□□□ -1.44
CSTF1-205ENST00000490539 LRIG2O94898 1065 aa6.07□□□□□ -1.44
CSTF1-205ENST00000490539 HMOX1P09601 288 aa6.07□□□□□ -1.44
CSTF1-205ENST00000490539 TFE3P19532 575 aaPredicted RBP6.07□□□□□ -1.44
CSTF1-205ENST00000490539 RPL6Q02878 288 aaKnown RBP6.07□□□□□ -1.44
CSTF1-205ENST00000490539 LMNB2Q03252 620 aa6.07□□□□□ -1.44
CSTF1-205ENST00000490539 PTPN11Q06124 597 aaPredicted RBP6.07□□□□□ -1.44
CSTF1-205ENST00000490539 SNAP47Q5SQN1 464 aa6.07□□□□□ -1.44
CSTF1-205ENST00000490539 TOP6BLQ8N6T0 577 aa6.07□□□□□ -1.44
CSTF1-205ENST00000490539 PHC3Q8NDX5 983 aa6.07□□□□□ -1.44
CSTF1-205ENST00000490539 TMEM74Q96NL1 305 aa6.07□□□□□ -1.44
CSTF1-205ENST00000490539 DUSP23Q9BVJ7 150 aa6.07□□□□□ -1.44
CSTF1-205ENST00000490539 KRTAP4-2Q9BYR5 136 aa6.07□□□□□ -1.44
CSTF1-205ENST00000490539 STK32BQ9NY57 414 aa6.07□□□□□ -1.44
CSTF1-205ENST00000490539 TLR6Q9Y2C9 796 aa6.07□□□□□ -1.44
CSTF1-205ENST00000490539 MEGF6O75095 1541 aa6.07□□□□□ -1.44
CSTF1-205ENST00000490539 PEAK1Q9H792 1746 aa6.07□□□□□ -1.44
CSTF1-205ENST00000490539 WNK3Q9BYP7 1800 aa6.06□□□□□ -1.44
CSTF1-205ENST00000490539 MINDY4BA8MYZ0 360 aa6.06□□□□□ -1.44
CSTF1-205ENST00000490539 PHKG2P15735 406 aa6.06□□□□□ -1.44
CSTF1-205ENST00000490539 TEFQ10587 303 aa6.06□□□□□ -1.44
CSTF1-205ENST00000490539 CAMK2GQ13555 558 aaPredicted RBP6.06□□□□□ -1.44
CSTF1-205ENST00000490539 TXNRD1Q16881 649 aa6.06□□□□□ -1.44
CSTF1-205ENST00000490539 ZNF746Q6NUN9 644 aaPredicted RBP6.06□□□□□ -1.44
CSTF1-205ENST00000490539 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.06□□□□□ -1.44
CSTF1-205ENST00000490539 SHISA5Q8N114 240 aa6.06□□□□□ -1.44
CSTF1-205ENST00000490539 STK11IPQ8N1F8 1099 aa6.06□□□□□ -1.44
CSTF1-205ENST00000490539 MFSD2AQ8NA29 543 aa6.06□□□□□ -1.44
CSTF1-205ENST00000490539 TMEM87AQ8NBN3 555 aa6.06□□□□□ -1.44
CSTF1-205ENST00000490539 MKNK2Q9HBH9 465 aa6.06□□□□□ -1.44
CSTF1-205ENST00000490539 GGT7Q9UJ14 662 aa6.06□□□□□ -1.44
CSTF1-205ENST00000490539 CCNL1Q9UK58 526 aaPredicted RBP6.06□□□□□ -1.44
CSTF1-205ENST00000490539 KDRP35968 1356 aa6.06□□□□□ -1.44
CSTF1-205ENST00000490539 FANCIQ9NVI1 1328 aa6.05□□□□□ -1.44
CSTF1-205ENST00000490539 GNAT3A8MTJ3 354 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms