RNA–Protein interactions for RNA: ENST00000490354.5

RBM39-235, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 436 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-235ENST00000490354 SGPP1Q9BX95 441 aa6.13□□□□□ -1.43
RBM39-235ENST00000490354 ZNF552Q9H707 407 aaPredicted RBP6.13□□□□□ -1.43
RBM39-235ENST00000490354 PANK3Q9H999 370 aa6.13□□□□□ -1.43
RBM39-235ENST00000490354 GCM1Q9NP62 436 aa6.13□□□□□ -1.43
RBM39-235ENST00000490354 GPR160Q9UJ42 338 aa6.13□□□□□ -1.43
RBM39-235ENST00000490354 CNOT6Q9ULM6 557 aaKnown RBP6.13□□□□□ -1.43
RBM39-235ENST00000490354 CEP170BQ9Y4F5 1589 aaPredicted RBP6.13□□□□□ -1.43
RBM39-235ENST00000490354 C3P01024 1663 aa6.13□□□□□ -1.43
RBM39-235ENST00000490354 KDM5AP29375 1690 aaKnown RBP6.13□□□□□ -1.43
RBM39-235ENST00000490354 TEX51A0A1B0GUA7 166 aa6.12□□□□□ -1.43
RBM39-235ENST00000490354 KIF1BO60333 1816 aa6.12□□□□□ -1.43
RBM39-235ENST00000490354 PRPF40AO75400 957 aaKnown RBP6.12□□□□□ -1.43
RBM39-235ENST00000490354 KCNA6P17658 529 aa6.12□□□□□ -1.43
RBM39-235ENST00000490354 PDE6BP35913 854 aa6.12□□□□□ -1.43
RBM39-235ENST00000490354 SAFB2Q14151 953 aaKnown RBP eCLIP6.12□□□□□ -1.43
RBM39-235ENST00000490354 ASXL1Q8IXJ9 1541 aa6.12□□□□□ -1.43
RBM39-235ENST00000490354 RELTQ969Z4 430 aa6.12□□□□□ -1.43
RBM39-235ENST00000490354 SYTL4Q96C24 671 aaPredicted RBP6.12□□□□□ -1.43
RBM39-235ENST00000490354 CDK19Q9BWU1 502 aa6.12□□□□□ -1.43
RBM39-235ENST00000490354 ZCCHC4Q9H5U6 513 aa6.12□□□□□ -1.43
RBM39-235ENST00000490354 ROBO2Q9HCK4 1378 aa6.12□□□□□ -1.43
RBM39-235ENST00000490354 KIAA1210Q9ULL0 1709 aa6.12□□□□□ -1.43
RBM39-235ENST00000490354 FER1L4A9Z1Z3 1794 aa6.11□□□□□ -1.43
RBM39-235ENST00000490354 DLC1Q96QB1 1528 aa6.11□□□□□ -1.43
RBM39-235ENST00000490354 NPHP4O75161 1426 aaPredicted RBP6.11□□□□□ -1.43
RBM39-235ENST00000490354 PTPRUQ92729 1446 aa6.11□□□□□ -1.43
RBM39-235ENST00000490354 PLEKHH1Q9ULM0 1364 aa6.11□□□□□ -1.43
RBM39-235ENST00000490354 A0A0G2JLL6 359 aaPredicted RBP6.11□□□□□ -1.43
RBM39-235ENST00000490354 SHISA3A0PJX4 238 aa6.11□□□□□ -1.43
RBM39-235ENST00000490354 CCER2I3L3R5 266 aa6.11□□□□□ -1.43
RBM39-235ENST00000490354 PSPNO60542 156 aa6.11□□□□□ -1.43
RBM39-235ENST00000490354 TEKQ02763 1124 aa6.11□□□□□ -1.43
RBM39-235ENST00000490354 SPPL2CQ8IUH8 684 aa6.11□□□□□ -1.43
RBM39-235ENST00000490354 SHISA4Q96DD7 197 aa6.11□□□□□ -1.43
RBM39-235ENST00000490354 PRKRIP1Q9H875 184 aaPredicted RBP6.11□□□□□ -1.43
RBM39-235ENST00000490354 RIMS1Q86UR5 1692 aaKnown RBP6.1□□□□□ -1.43
RBM39-235ENST00000490354 PTCH1Q13635 1447 aa6.1□□□□□ -1.43
RBM39-235ENST00000490354 NINLQ9Y2I6 1382 aa6.1□□□□□ -1.43
RBM39-235ENST00000490354 YARSP54577 528 aaKnown RBP6.1□□□□□ -1.43
RBM39-235ENST00000490354 HSPA2P54652 639 aa6.1□□□□□ -1.43
RBM39-235ENST00000490354 CHRNEQ04844 493 aa6.1□□□□□ -1.43
RBM39-235ENST00000490354 DUSP4Q13115 394 aa6.1□□□□□ -1.43
RBM39-235ENST00000490354 SNX17Q15036 470 aa6.1□□□□□ -1.43
RBM39-235ENST00000490354 RALBP1Q15311 655 aa6.1□□□□□ -1.43
RBM39-235ENST00000490354 TMEM201Q5SNT2 666 aa6.1□□□□□ -1.43
RBM39-235ENST00000490354 ANKS4BQ8N8V4 417 aa6.1□□□□□ -1.43
RBM39-235ENST00000490354 KCNC2Q96PR1 638 aa6.1□□□□□ -1.43
RBM39-235ENST00000490354 DUSP9Q99956 384 aaKnown RBP6.1□□□□□ -1.43
RBM39-235ENST00000490354 SLC12A5Q9H2X9 1139 aa6.1□□□□□ -1.43
RBM39-235ENST00000490354 KNSTRNQ9Y448 316 aa6.1□□□□□ -1.43
RBM39-235ENST00000490354 KCTD3Q9Y597 815 aa6.1□□□□□ -1.43
RBM39-235ENST00000490354 PPLO60437 1756 aa6.1□□□□□ -1.43
RBM39-235ENST00000490354 UBR1Q8IWV7 1749 aa6.1□□□□□ -1.43
RBM39-235ENST00000490354 KTN1Q86UP2 1357 aaKnown RBP6.09□□□□□ -1.43
RBM39-235ENST00000490354 IFT172Q9UG01 1749 aa6.09□□□□□ -1.43
RBM39-235ENST00000490354 RBM47A0AV96 593 aaKnown RBP6.09□□□□□ -1.43
RBM39-235ENST00000490354 TNNI2P48788 182 aa6.09□□□□□ -1.43
RBM39-235ENST00000490354 SSPNQ14714 243 aa6.09□□□□□ -1.43
RBM39-235ENST00000490354 ZNF385BQ569K4 471 aa6.09□□□□□ -1.43
RBM39-235ENST00000490354 TCERG1LQ5VWI1 586 aa6.09□□□□□ -1.43
RBM39-235ENST00000490354 BNC2Q6ZN30 1099 aaPredicted RBP6.09□□□□□ -1.43
RBM39-235ENST00000490354 SIRT2Q8IXJ6 389 aa6.09□□□□□ -1.43
RBM39-235ENST00000490354 SLFN12Q8IYM2 578 aa6.09□□□□□ -1.43
RBM39-235ENST00000490354 PHC3Q8NDX5 983 aa6.09□□□□□ -1.43
RBM39-235ENST00000490354 LINC01599Q8WXQ3 324 aa6.09□□□□□ -1.43
RBM39-235ENST00000490354 KREMEN1Q96MU8 473 aa6.09□□□□□ -1.43
RBM39-235ENST00000490354 G6PC3Q9BUM1 346 aa6.09□□□□□ -1.43
RBM39-235ENST00000490354 MYO3AQ8NEV4 1616 aa6.09□□□□□ -1.43
RBM39-235ENST00000490354 NPC1L1Q9UHC9 1359 aa6.08□□□□□ -1.44
RBM39-235ENST00000490354 CHURC1-FNTBB4DL54 471 aa6.08□□□□□ -1.44
RBM39-235ENST00000490354 F6X3S4 739 aa6.08□□□□□ -1.44
RBM39-235ENST00000490354 FOXD2O60548 495 aaPredicted RBP6.08□□□□□ -1.44
RBM39-235ENST00000490354 TRIM13O60858 407 aa6.08□□□□□ -1.44
RBM39-235ENST00000490354 CILPO75339 1184 aa6.08□□□□□ -1.44
RBM39-235ENST00000490354 EFEMP2O95967 443 aa6.08□□□□□ -1.44
RBM39-235ENST00000490354 RLBP1P12271 317 aa6.08□□□□□ -1.44
RBM39-235ENST00000490354 MARCH10Q8NA82 808 aaPredicted RBP6.08□□□□□ -1.44
RBM39-235ENST00000490354 TERF2IPQ9NYB0 399 aa6.08□□□□□ -1.44
RBM39-235ENST00000490354 KLHL3Q9UH77 587 aa6.08□□□□□ -1.44
RBM39-235ENST00000490354 DIP2AQ14689 1571 aa6.08□□□□□ -1.44
RBM39-235ENST00000490354 NRXN3Q9Y4C0 1643 aa6.07□□□□□ -1.44
RBM39-235ENST00000490354 FAM221AA4D161 298 aa6.07□□□□□ -1.44
RBM39-235ENST00000490354 OR14I1A6ND48 311 aa6.07□□□□□ -1.44
RBM39-235ENST00000490354 NOTOA8MTQ0 251 aa6.07□□□□□ -1.44
RBM39-235ENST00000490354 RFXAPO00287 272 aa6.07□□□□□ -1.44
RBM39-235ENST00000490354 BPNT1O95861 308 aa6.07□□□□□ -1.44
RBM39-235ENST00000490354 CLEC16AQ2KHT3 1053 aa6.07□□□□□ -1.44
RBM39-235ENST00000490354 ADGRF1Q5T601 910 aa6.07□□□□□ -1.44
RBM39-235ENST00000490354 CCDC84Q86UT8 332 aaPredicted RBP6.07□□□□□ -1.44
RBM39-235ENST00000490354 CCDC74BQ96LY2 380 aa6.07□□□□□ -1.44
RBM39-235ENST00000490354 NOC4LQ9BVI4 516 aaKnown RBP6.07□□□□□ -1.44
RBM39-235ENST00000490354 ASPNQ9BXN1 380 aa6.07□□□□□ -1.44
RBM39-235ENST00000490354 REV1Q9UBZ9 1251 aa6.07□□□□□ -1.44
RBM39-235ENST00000490354 JAG2Q9Y219 1238 aa6.07□□□□□ -1.44
RBM39-235ENST00000490354 ZNF281Q9Y2X9 895 aa6.07□□□□□ -1.44
RBM39-235ENST00000490354 LMTK3Q96Q04 1460 aa6.07□□□□□ -1.44
RBM39-235ENST00000490354 IQGAP1P46940 1657 aa6.07□□□□□ -1.44
RBM39-235ENST00000490354 ANKRD36BQ8N2N9 1353 aa6.06□□□□□ -1.44
RBM39-235ENST00000490354 CFAP65Q6ZU64 1925 aaKnown RBP6.06□□□□□ -1.44
RBM39-235ENST00000490354 USP2O75604 605 aaPredicted RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms