RNA–Protein interactions for RNA: ENST00000490192.1

TM9SF3-206, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 4

Gene TM9SF3, Length 884 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-206ENST00000490192 TCEAL8Q8IYN2 117 aa8.47□□□□□ -1.05
TM9SF3-206ENST00000490192 PPP1R13LQ8WUF5 828 aa8.47□□□□□ -1.05
TM9SF3-206ENST00000490192 FAM46AQ96IP4 442 aaKnown RBP8.47□□□□□ -1.05
TM9SF3-206ENST00000490192 KCNF1Q9H3M0 494 aa8.47□□□□□ -1.05
TM9SF3-206ENST00000490192 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.47□□□□□ -1.05
TM9SF3-206ENST00000490192 TRAF6Q9Y4K3 522 aa8.47□□□□□ -1.05
TM9SF3-206ENST00000490192 ZEB2O60315 1214 aa8.46□□□□□ -1.06
TM9SF3-206ENST00000490192 PYGMP11217 842 aa8.46□□□□□ -1.06
TM9SF3-206ENST00000490192 SCNN1BP51168 640 aa8.46□□□□□ -1.06
TM9SF3-206ENST00000490192 SKOR2Q2VWA4 1001 aaPredicted RBP8.46□□□□□ -1.06
TM9SF3-206ENST00000490192 FAM102BQ5T8I3 360 aa8.46□□□□□ -1.06
TM9SF3-206ENST00000490192 NXNQ6DKJ4 435 aa8.46□□□□□ -1.06
TM9SF3-206ENST00000490192 SLC4A10Q6U841 1118 aa8.46□□□□□ -1.06
TM9SF3-206ENST00000490192 ARMC10Q8N2F6 343 aa8.46□□□□□ -1.06
TM9SF3-206ENST00000490192 C12orf50Q8NA57 414 aaPredicted RBP8.46□□□□□ -1.06
TM9SF3-206ENST00000490192 TMEM145Q8NBT3 493 aa8.46□□□□□ -1.06
TM9SF3-206ENST00000490192 ISL2Q96A47 359 aa8.46□□□□□ -1.06
TM9SF3-206ENST00000490192 SLC39A13Q96H72 371 aa8.46□□□□□ -1.06
TM9SF3-206ENST00000490192 MYRFLQ96LU7 910 aa8.46□□□□□ -1.06
TM9SF3-206ENST00000490192 FOXQ1Q9C009 403 aa8.46□□□□□ -1.06
TM9SF3-206ENST00000490192 CYP4F12Q9HCS2 524 aa8.46□□□□□ -1.06
TM9SF3-206ENST00000490192 CHST12Q9NRB3 414 aa8.46□□□□□ -1.06
TM9SF3-206ENST00000490192 APOBEC2Q9Y235 224 aaKnown RBP8.46□□□□□ -1.06
TM9SF3-206ENST00000490192 TNKSO95271 1327 aa8.46□□□□□ -1.06
TM9SF3-206ENST00000490192 MEGF11A6BM72 1044 aa8.45□□□□□ -1.06
TM9SF3-206ENST00000490192 B4E1Z4 1266 aa8.45□□□□□ -1.06
TM9SF3-206ENST00000490192 PRPF3O43395 683 aaKnown RBP8.45□□□□□ -1.06
TM9SF3-206ENST00000490192 RNGTTO60942 597 aaKnown RBP8.45□□□□□ -1.06
TM9SF3-206ENST00000490192 CRTAMO95727 393 aa8.45□□□□□ -1.06
TM9SF3-206ENST00000490192 IGLV1-40P01703 118 aa8.45□□□□□ -1.06
TM9SF3-206ENST00000490192 SNRPB2P08579 225 aaKnown RBP8.45□□□□□ -1.06
TM9SF3-206ENST00000490192 BMP3P12645 472 aa8.45□□□□□ -1.06
TM9SF3-206ENST00000490192 ZNF445P59923 1031 aa8.45□□□□□ -1.06
TM9SF3-206ENST00000490192 RNF4P78317 190 aa8.45□□□□□ -1.06
TM9SF3-206ENST00000490192 PPP2R5DQ14738 602 aa8.45□□□□□ -1.06
TM9SF3-206ENST00000490192 NOL9Q5SY16 702 aaKnown RBP8.45□□□□□ -1.06
TM9SF3-206ENST00000490192 ZCCHC8Q6NZY4 707 aaKnown RBP8.45□□□□□ -1.06
TM9SF3-206ENST00000490192 KSR2Q6VAB6 950 aa8.45□□□□□ -1.06
TM9SF3-206ENST00000490192 CLEC10AQ8IUN9 316 aa8.45□□□□□ -1.06
TM9SF3-206ENST00000490192 WNK4Q96J92 1243 aa8.45□□□□□ -1.06
TM9SF3-206ENST00000490192 CAMKK2Q96RR4 588 aa8.45□□□□□ -1.06
TM9SF3-206ENST00000490192 TMPRSS13Q9BYE2 586 aa8.45□□□□□ -1.06
TM9SF3-206ENST00000490192 NKX2-4Q9H2Z4 354 aa8.45□□□□□ -1.06
TM9SF3-206ENST00000490192 FBXL21Q9UKT6 434 aa8.45□□□□□ -1.06
TM9SF3-206ENST00000490192 SPEF1Q9Y4P9 236 aa8.45□□□□□ -1.06
TM9SF3-206ENST00000490192 ASXL2Q76L83 1435 aa8.45□□□□□ -1.06
TM9SF3-206ENST00000490192 A0A087WZG4 1122 aa8.44□□□□□ -1.06
TM9SF3-206ENST00000490192 HYAL3O43820 417 aaPredicted RBP8.44□□□□□ -1.06
TM9SF3-206ENST00000490192 HOXC12P31275 282 aa8.44□□□□□ -1.06
TM9SF3-206ENST00000490192 BRD3Q15059 726 aa8.44□□□□□ -1.06
TM9SF3-206ENST00000490192 PRSS53Q2L4Q9 553 aa8.44□□□□□ -1.06
TM9SF3-206ENST00000490192 USP53Q70EK8 1073 aa8.44□□□□□ -1.06
TM9SF3-206ENST00000490192 MAGEB6Q8N7X4 407 aa8.44□□□□□ -1.06
TM9SF3-206ENST00000490192 VWCEQ96DN2 955 aa8.44□□□□□ -1.06
TM9SF3-206ENST00000490192 CCDC140Q96MF4 163 aa8.44□□□□□ -1.06
TM9SF3-206ENST00000490192 KREMEN1Q96MU8 473 aa8.44□□□□□ -1.06
TM9SF3-206ENST00000490192 NOL6Q9H6R4 1146 aaKnown RBP8.44□□□□□ -1.06
TM9SF3-206ENST00000490192 SSU72Q9NP77 194 aaKnown RBP8.44□□□□□ -1.06
TM9SF3-206ENST00000490192 CRTAC1Q9NQ79 661 aa8.44□□□□□ -1.06
TM9SF3-206ENST00000490192 CEP131Q9UPN4 1083 aa8.44□□□□□ -1.06
TM9SF3-206ENST00000490192 PCDHB12Q9Y5F1 795 aa8.44□□□□□ -1.06
TM9SF3-206ENST00000490192 PCDHA9Q9Y5H5 950 aa8.44□□□□□ -1.06
TM9SF3-206ENST00000490192 GOLGA6CA6NDK9 693 aa8.43□□□□□ -1.06
TM9SF3-206ENST00000490192 GOLGA6BA6NDN3 693 aa8.43□□□□□ -1.06
TM9SF3-206ENST00000490192 M0R2C6 588 aa8.43□□□□□ -1.06
TM9SF3-206ENST00000490192 ABLIM3O94929 683 aa8.43□□□□□ -1.06
TM9SF3-206ENST00000490192 FBXO21O94952 628 aa8.43□□□□□ -1.06
TM9SF3-206ENST00000490192 LDHAP00338 332 aaKnown RBP8.43□□□□□ -1.06
TM9SF3-206ENST00000490192 GOLGA6DP0CG33 693 aa8.43□□□□□ -1.06
TM9SF3-206ENST00000490192 ADH5P11766 374 aa8.43□□□□□ -1.06
TM9SF3-206ENST00000490192 ZSCAN20P17040 1043 aaPredicted RBP8.43□□□□□ -1.06
TM9SF3-206ENST00000490192 ECI1P42126 302 aa8.43□□□□□ -1.06
TM9SF3-206ENST00000490192 SLC35F1Q5T1Q4 408 aa8.43□□□□□ -1.06
TM9SF3-206ENST00000490192 FAM20CQ8IXL6 584 aa8.43□□□□□ -1.06
TM9SF3-206ENST00000490192 SAMD3Q8N6K7 520 aa8.43□□□□□ -1.06
TM9SF3-206ENST00000490192 JPH3Q8WXH2 748 aaPredicted RBP8.43□□□□□ -1.06
TM9SF3-206ENST00000490192 C1orf159Q96HA4 380 aa8.43□□□□□ -1.06
TM9SF3-206ENST00000490192 RHOBTB2Q9BYZ6 727 aa8.43□□□□□ -1.06
TM9SF3-206ENST00000490192 PRDM16Q9HAZ2 1276 aa8.43□□□□□ -1.06
TM9SF3-206ENST00000490192 PIDD1Q9HB75 910 aa8.43□□□□□ -1.06
TM9SF3-206ENST00000490192 PCMTD2Q9NV79 361 aa8.43□□□□□ -1.06
TM9SF3-206ENST00000490192 GOLGA6AQ9NYA3 693 aa8.43□□□□□ -1.06
TM9SF3-206ENST00000490192 SAMD15Q9P1V8 674 aa8.43□□□□□ -1.06
TM9SF3-206ENST00000490192 FHOD1Q9Y613 1164 aa8.43□□□□□ -1.06
TM9SF3-206ENST00000490192 COL17A1Q9UMD9 1497 aaPredicted RBP8.43□□□□□ -1.06
TM9SF3-206ENST00000490192 ZNF891A8MT65 544 aaPredicted RBP8.42□□□□□ -1.06
TM9SF3-206ENST00000490192 RFPL1O75677 317 aa8.42□□□□□ -1.06
TM9SF3-206ENST00000490192 PRKD3O94806 890 aa8.42□□□□□ -1.06
TM9SF3-206ENST00000490192 APPP05067 770 aa8.42□□□□□ -1.06
TM9SF3-206ENST00000490192 RXRBP28702 533 aa8.42□□□□□ -1.06
TM9SF3-206ENST00000490192 PREPP48147 710 aa8.42□□□□□ -1.06
TM9SF3-206ENST00000490192 NFIAQ12857 509 aa8.42□□□□□ -1.06
TM9SF3-206ENST00000490192 GRB10Q13322 594 aa8.42□□□□□ -1.06
TM9SF3-206ENST00000490192 SART3Q15020 963 aaKnown RBP8.42□□□□□ -1.06
TM9SF3-206ENST00000490192 GFOD2Q3B7J2 385 aa8.42□□□□□ -1.06
TM9SF3-206ENST00000490192 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.42□□□□□ -1.06
TM9SF3-206ENST00000490192 BEND4Q6ZU67 534 aa8.42□□□□□ -1.06
TM9SF3-206ENST00000490192 ARMCX6Q7L4S7 300 aa8.42□□□□□ -1.06
TM9SF3-206ENST00000490192 DYMQ7RTS9 669 aa8.42□□□□□ -1.06
TM9SF3-206ENST00000490192 ANKLE2Q86XL3 938 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms