RNA–Protein interactions for RNA: ENST00000490111.1

RTN1-207, Transcript of reticulon 1, humanhuman

TSL 3

Gene RTN1, Length 303 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-207ENST00000490111 PROSER3Q2NL68 480 aa5.34□□□□□ -1.55
RTN1-207ENST00000490111 TNNI3KQ59H18 835 aa5.34□□□□□ -1.55
RTN1-207ENST00000490111 MORN1Q5T089 497 aa5.34□□□□□ -1.55
RTN1-207ENST00000490111 FAM83BQ5T0W9 1011 aa5.34□□□□□ -1.55
RTN1-207ENST00000490111 CELF1Q92879 486 aaKnown RBP5.34□□□□□ -1.55
RTN1-207ENST00000490111 SHDQ96IW2 340 aa5.34□□□□□ -1.55
RTN1-207ENST00000490111 NECAB3Q96P71 396 aaPredicted RBP5.34□□□□□ -1.55
RTN1-207ENST00000490111 LBHD1Q9BQE6 289 aaPredicted RBP5.34□□□□□ -1.55
RTN1-207ENST00000490111 RSRP1Q9BUV0 290 aa5.34□□□□□ -1.55
RTN1-207ENST00000490111 CDH19Q9H159 772 aa5.34□□□□□ -1.55
RTN1-207ENST00000490111 CAAP1Q9H8G2 361 aa5.34□□□□□ -1.55
RTN1-207ENST00000490111 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.34□□□□□ -1.55
RTN1-207ENST00000490111 CPA4Q9UI42 421 aa5.34□□□□□ -1.55
RTN1-207ENST00000490111 GABRQQ9UN88 632 aa5.34□□□□□ -1.55
RTN1-207ENST00000490111 MAPK8IP1Q9UQF2 711 aa5.34□□□□□ -1.55
RTN1-207ENST00000490111 DLG5Q8TDM6 1919 aa5.33□□□□□ -1.56
RTN1-207ENST00000490111 A0A087X0B3 334 aa5.33□□□□□ -1.56
RTN1-207ENST00000490111 A0A1W2PRU2 124 aa5.33□□□□□ -1.56
RTN1-207ENST00000490111 TMEM229AB2RXF0 380 aa5.33□□□□□ -1.56
RTN1-207ENST00000490111 BTBD19C9JJ37 291 aa5.33□□□□□ -1.56
RTN1-207ENST00000490111 F2P00734 622 aa5.33□□□□□ -1.56
RTN1-207ENST00000490111 MYL3P08590 195 aa5.33□□□□□ -1.56
RTN1-207ENST00000490111 CETPP11597 493 aa5.33□□□□□ -1.56
RTN1-207ENST00000490111 ELNP15502 786 aa5.33□□□□□ -1.56
RTN1-207ENST00000490111 VARSP26640 1264 aaKnown RBP5.33□□□□□ -1.56
RTN1-207ENST00000490111 ATN1P54259 1190 aaPredicted RBP5.33□□□□□ -1.56
RTN1-207ENST00000490111 FCGRTP55899 365 aa5.33□□□□□ -1.56
RTN1-207ENST00000490111 NFKB2Q00653 900 aa5.33□□□□□ -1.56
RTN1-207ENST00000490111 NHLH1Q02575 133 aa5.33□□□□□ -1.56
RTN1-207ENST00000490111 GRIN2CQ14957 1233 aa5.33□□□□□ -1.56
RTN1-207ENST00000490111 SHHQ15465 462 aa5.33□□□□□ -1.56
RTN1-207ENST00000490111 KRT24Q2M2I5 525 aa5.33□□□□□ -1.56
RTN1-207ENST00000490111 NBPF20Q3BBV1 942 aa5.33□□□□□ -1.56
RTN1-207ENST00000490111 NBPF12Q5TAG4 269 aaPredicted RBP5.33□□□□□ -1.56
RTN1-207ENST00000490111 ZKSCAN2Q63HK3 967 aa5.33□□□□□ -1.56
RTN1-207ENST00000490111 PCNX4Q63HM2 1172 aa5.33□□□□□ -1.56
RTN1-207ENST00000490111 NXNQ6DKJ4 435 aa5.33□□□□□ -1.56
RTN1-207ENST00000490111 SLC4A10Q6U841 1118 aa5.33□□□□□ -1.56
RTN1-207ENST00000490111 PI16Q6UXB8 463 aa5.33□□□□□ -1.56
RTN1-207ENST00000490111 TCEAL8Q8IYN2 117 aa5.33□□□□□ -1.56
RTN1-207ENST00000490111 RTF1Q92541 710 aaKnown RBP5.33□□□□□ -1.56
RTN1-207ENST00000490111 EDEM1Q92611 657 aa5.33□□□□□ -1.56
RTN1-207ENST00000490111 SECISBP2LQ93073 1101 aaKnown RBP5.33□□□□□ -1.56
RTN1-207ENST00000490111 ZBED3Q96IU2 234 aaPredicted RBP5.33□□□□□ -1.56
RTN1-207ENST00000490111 CDC5LQ99459 802 aaKnown RBP5.33□□□□□ -1.56
RTN1-207ENST00000490111 NOC4LQ9BVI4 516 aaKnown RBP5.33□□□□□ -1.56
RTN1-207ENST00000490111 MXD3Q9BW11 206 aa5.33□□□□□ -1.56
RTN1-207ENST00000490111 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.33□□□□□ -1.56
RTN1-207ENST00000490111 TSPAN10Q9H1Z9 355 aaPredicted RBP5.33□□□□□ -1.56
RTN1-207ENST00000490111 LRFN2Q9ULH4 789 aa5.33□□□□□ -1.56
RTN1-207ENST00000490111 SLC27A5Q9Y2P5 690 aa5.33□□□□□ -1.56
RTN1-207ENST00000490111 DDX60LQ5H9U9 1706 aaKnown RBP5.33□□□□□ -1.56
RTN1-207ENST00000490111 MYO3BQ8WXR4 1341 aa5.32□□□□□ -1.56
RTN1-207ENST00000490111 CLSPNQ9HAW4 1339 aa5.32□□□□□ -1.56
RTN1-207ENST00000490111 SMIM22K7EJ46 135 aa5.32□□□□□ -1.56
RTN1-207ENST00000490111 SLC26A4O43511 780 aa5.32□□□□□ -1.56
RTN1-207ENST00000490111 TCEA3O75764 348 aa5.32□□□□□ -1.56
RTN1-207ENST00000490111 RNASEH2AO75792 299 aaKnown RBP5.32□□□□□ -1.56
RTN1-207ENST00000490111 UFL1O94874 794 aa5.32□□□□□ -1.56
RTN1-207ENST00000490111 ZRANB2O95218 330 aaKnown RBP eCLIP5.32□□□□□ -1.56
RTN1-207ENST00000490111 MYCLP1P12525 358 aaPredicted RBP5.32□□□□□ -1.56
RTN1-207ENST00000490111 BMP1P13497 986 aa5.32□□□□□ -1.56
RTN1-207ENST00000490111 SOX5P35711 763 aa5.32□□□□□ -1.56
RTN1-207ENST00000490111 CASP2P42575 452 aa5.32□□□□□ -1.56
RTN1-207ENST00000490111 FLT3LGP49771 235 aa5.32□□□□□ -1.56
RTN1-207ENST00000490111 GUCY2FP51841 1108 aa5.32□□□□□ -1.56
RTN1-207ENST00000490111 PURAQ00577 322 aaKnown RBP5.32□□□□□ -1.56
RTN1-207ENST00000490111 DNM1Q05193 864 aaKnown RBP5.32□□□□□ -1.56
RTN1-207ENST00000490111 PIN1Q13526 163 aaPredicted RBP5.32□□□□□ -1.56
RTN1-207ENST00000490111 ALFQ53S48 1182 aa5.32□□□□□ -1.56
RTN1-207ENST00000490111 DACT2Q5SW24 774 aa5.32□□□□□ -1.56
RTN1-207ENST00000490111 FAM102BQ5T8I3 360 aa5.32□□□□□ -1.56
RTN1-207ENST00000490111 C1orf53Q5VUE5 145 aa5.32□□□□□ -1.56
RTN1-207ENST00000490111 CCDC70Q6NSX1 233 aa5.32□□□□□ -1.56
RTN1-207ENST00000490111 RNF19BQ6ZMZ0 732 aa5.32□□□□□ -1.56
RTN1-207ENST00000490111 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.32□□□□□ -1.56
RTN1-207ENST00000490111 SH3BP5LQ7L8J4 393 aa5.32□□□□□ -1.56
RTN1-207ENST00000490111 RNF180Q86T96 592 aa5.32□□□□□ -1.56
RTN1-207ENST00000490111 DGKHQ86XP1 1220 aa5.32□□□□□ -1.56
RTN1-207ENST00000490111 FAM169BQ8N8A8 192 aa5.32□□□□□ -1.56
RTN1-207ENST00000490111 CPLX3Q8WVH0 158 aa5.32□□□□□ -1.56
RTN1-207ENST00000490111 NINJ1Q92982 152 aa5.32□□□□□ -1.56
RTN1-207ENST00000490111 MYO19Q96H55 970 aa5.32□□□□□ -1.56
RTN1-207ENST00000490111 NT5C1AQ9BXI3 368 aa5.32□□□□□ -1.56
RTN1-207ENST00000490111 SRRTQ9BXP5 876 aaKnown RBP5.32□□□□□ -1.56
RTN1-207ENST00000490111 MUC3BQ9H195 1237 aa5.32□□□□□ -1.56
RTN1-207ENST00000490111 NGRNQ9NPE2 291 aaKnown RBP5.32□□□□□ -1.56
RTN1-207ENST00000490111 C11orf16Q9NQ32 467 aa5.32□□□□□ -1.56
RTN1-207ENST00000490111 ANKIB1Q9P2G1 1089 aa5.32□□□□□ -1.56
RTN1-207ENST00000490111 GGA1Q9UJY5 639 aa5.32□□□□□ -1.56
RTN1-207ENST00000490111 ZNF804BA4D1E1 1349 aa5.31□□□□□ -1.56
RTN1-207ENST00000490111 PFASO15067 1338 aa5.31□□□□□ -1.56
RTN1-207ENST00000490111 SH3TC1Q8TE82 1336 aa5.31□□□□□ -1.56
RTN1-207ENST00000490111 MUC3AQ02505 3323 aa5.31□□□□□ -1.56
RTN1-207ENST00000490111 FAM86C2PA6NEL3 165 aa5.31□□□□□ -1.56
RTN1-207ENST00000490111 CPNE3O75131 537 aaKnown RBP5.31□□□□□ -1.56
RTN1-207ENST00000490111 KATNA1O75449 491 aa5.31□□□□□ -1.56
RTN1-207ENST00000490111 IFIT2P09913 472 aaKnown RBP5.31□□□□□ -1.56
RTN1-207ENST00000490111 JUNDP17535 347 aa5.31□□□□□ -1.56
RTN1-207ENST00000490111 EIF2S2P20042 333 aaKnown RBP5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms