RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 RRP12Q5JTH9 1297 aaKnown RBP13.95□□□□□ -0.18
SRSF4-204ENST00000489898 TRIM43Q96BQ3 446 aaPredicted RBP13.95□□□□□ -0.18
SRSF4-204ENST00000489898 SLC5A4Q9NY91 659 aa13.95□□□□□ -0.18
SRSF4-204ENST00000489898 FBXO40Q9UH90 709 aa13.95□□□□□ -0.18
SRSF4-204ENST00000489898 GNEQ9Y223 722 aaKnown RBP13.95□□□□□ -0.18
SRSF4-204ENST00000489898 WDR19Q8NEZ3 1342 aa13.94□□□□□ -0.18
SRSF4-204ENST00000489898 B4E1Z4 1266 aa13.94□□□□□ -0.18
SRSF4-204ENST00000489898 OPLAHO14841 1288 aa13.94□□□□□ -0.18
SRSF4-204ENST00000489898 KDM4AO75164 1064 aa13.94□□□□□ -0.18
SRSF4-204ENST00000489898 CHMLP26374 656 aa13.94□□□□□ -0.18
SRSF4-204ENST00000489898 ACVR2BQ13705 512 aa13.94□□□□□ -0.18
SRSF4-204ENST00000489898 CCDC144BQ3MJ40 725 aa13.94□□□□□ -0.18
SRSF4-204ENST00000489898 LRIT3Q3SXY7 679 aa13.94□□□□□ -0.18
SRSF4-204ENST00000489898 SYDE2Q5VT97 1194 aa13.94□□□□□ -0.18
SRSF4-204ENST00000489898 TAPT1Q6NXT6 567 aa13.94□□□□□ -0.18
SRSF4-204ENST00000489898 CCDC174Q6PII3 467 aa13.94□□□□□ -0.18
SRSF4-204ENST00000489898 CYB5R4Q7L1T6 521 aa13.94□□□□□ -0.18
SRSF4-204ENST00000489898 CHURC1Q8WUH1 139 aa13.94□□□□□ -0.18
SRSF4-204ENST00000489898 TRERF1Q96PN7 1200 aa13.94□□□□□ -0.18
SRSF4-204ENST00000489898 SENP2Q9HC62 589 aa13.94□□□□□ -0.18
SRSF4-204ENST00000489898 TET1Q8NFU7 2136 aa13.94□□□□□ -0.18
SRSF4-204ENST00000489898 TNKSO95271 1327 aa13.93□□□□□ -0.18
SRSF4-204ENST00000489898 TRIP12Q14669 1992 aaPredicted RBP13.93□□□□□ -0.18
SRSF4-204ENST00000489898 DUSP11O75319 330 aaKnown RBP13.93□□□□□ -0.18
SRSF4-204ENST00000489898 CYP21A2P08686 494 aa13.93□□□□□ -0.18
SRSF4-204ENST00000489898 RARBP10826 455 aa13.93□□□□□ -0.18
SRSF4-204ENST00000489898 EDNRBP24530 442 aa13.93□□□□□ -0.18
SRSF4-204ENST00000489898 EPHB4P54760 987 aa13.93□□□□□ -0.18
SRSF4-204ENST00000489898 GJA9P57773 515 aa13.93□□□□□ -0.18
SRSF4-204ENST00000489898 MDM2Q00987 491 aaPredicted RBP13.93□□□□□ -0.18
SRSF4-204ENST00000489898 TKFCQ3LXA3 575 aa13.93□□□□□ -0.18
SRSF4-204ENST00000489898 PPP4R3BQ5MIZ7 849 aa13.93□□□□□ -0.18
SRSF4-204ENST00000489898 MFSD6Q6ZSS7 791 aa13.93□□□□□ -0.18
SRSF4-204ENST00000489898 TDHQ8IZJ6 230 aa13.93□□□□□ -0.18
SRSF4-204ENST00000489898 FERMT2Q96AC1 680 aa13.93□□□□□ -0.18
SRSF4-204ENST00000489898 TTC14Q96N46 770 aa13.93□□□□□ -0.18
SRSF4-204ENST00000489898 DIAPH3Q9NSV4 1193 aa13.93□□□□□ -0.18
SRSF4-204ENST00000489898 ZHX1Q9UKY1 873 aaPredicted RBP13.93□□□□□ -0.18
SRSF4-204ENST00000489898 GRIN2DO15399 1336 aa13.92□□□□□ -0.18
SRSF4-204ENST00000489898 WDR81Q562E7 1941 aa13.92□□□□□ -0.18
SRSF4-204ENST00000489898 KBTBD13C9JR72 458 aa13.92□□□□□ -0.18
SRSF4-204ENST00000489898 SGSM2O43147 1006 aa13.92□□□□□ -0.18
SRSF4-204ENST00000489898 PPP1R11O60927 126 aaPredicted RBP13.92□□□□□ -0.18
SRSF4-204ENST00000489898 GOLGA8HP0CJ92 632 aa13.92□□□□□ -0.18
SRSF4-204ENST00000489898 ALAS1P13196 640 aa13.92□□□□□ -0.18
SRSF4-204ENST00000489898 ACLYP53396 1101 aa13.92□□□□□ -0.18
SRSF4-204ENST00000489898 ANTXR2P58335 489 aa13.92□□□□□ -0.18
SRSF4-204ENST00000489898 CCDC96Q2M329 555 aa13.92□□□□□ -0.18
SRSF4-204ENST00000489898 DGKHQ86XP1 1220 aa13.92□□□□□ -0.18
SRSF4-204ENST00000489898 FBXO16Q8IX29 292 aaPredicted RBP13.92□□□□□ -0.18
SRSF4-204ENST00000489898 ANKRD35Q8N283 1001 aa13.92□□□□□ -0.18
SRSF4-204ENST00000489898 ARRDC4Q8NCT1 418 aa13.92□□□□□ -0.18
SRSF4-204ENST00000489898 ABHD16BQ9H3Z7 469 aa13.92□□□□□ -0.18
SRSF4-204ENST00000489898 GPCPD1Q9NPB8 672 aa13.92□□□□□ -0.18
SRSF4-204ENST00000489898 PDGFCQ9NRA1 345 aa13.92□□□□□ -0.18
SRSF4-204ENST00000489898 ZSWIM5Q9P217 1185 aa13.92□□□□□ -0.18
SRSF4-204ENST00000489898 COL20A1Q9P218 1284 aa13.92□□□□□ -0.18
SRSF4-204ENST00000489898 ZBTB47Q9UFB7 747 aaPredicted RBP13.92□□□□□ -0.18
SRSF4-204ENST00000489898 TBX21Q9UL17 535 aa13.92□□□□□ -0.18
SRSF4-204ENST00000489898 CCPG1Q9ULG6 757 aa13.92□□□□□ -0.18
SRSF4-204ENST00000489898 MTMR7Q9Y216 660 aa13.92□□□□□ -0.18
SRSF4-204ENST00000489898 COL4A4P53420 1690 aaPredicted RBP13.91□□□□□ -0.18
SRSF4-204ENST00000489898 CDK7P50613 346 aa13.91□□□□□ -0.18
SRSF4-204ENST00000489898 ALDH5A1P51649 535 aaPredicted RBP13.91□□□□□ -0.18
SRSF4-204ENST00000489898 TLE2Q04725 743 aa13.91□□□□□ -0.18
SRSF4-204ENST00000489898 C9orf50Q5SZB4 431 aa13.91□□□□□ -0.18
SRSF4-204ENST00000489898 ANKRD33Q7Z3H0 272 aa13.91□□□□□ -0.18
SRSF4-204ENST00000489898 PNMA1Q8ND90 353 aa13.91□□□□□ -0.18
SRSF4-204ENST00000489898 ESR2Q92731 530 aa13.91□□□□□ -0.18
SRSF4-204ENST00000489898 VWCEQ96DN2 955 aa13.91□□□□□ -0.18
SRSF4-204ENST00000489898 MTMR8Q96EF0 704 aa13.91□□□□□ -0.18
SRSF4-204ENST00000489898 DDX11Q96FC9 970 aa13.91□□□□□ -0.18
SRSF4-204ENST00000489898 TSEN34Q9BSV6 310 aaKnown RBP13.91□□□□□ -0.18
SRSF4-204ENST00000489898 CNPY2Q9Y2B0 182 aa13.91□□□□□ -0.18
SRSF4-204ENST00000489898 ATP11BQ9Y2G3 1177 aa13.91□□□□□ -0.18
SRSF4-204ENST00000489898 ATG2AQ2TAZ0 1938 aa13.9□□□□□ -0.18
SRSF4-204ENST00000489898 RBM47A0AV96 593 aaKnown RBP13.9□□□□□ -0.18
SRSF4-204ENST00000489898 POTEB2H3BUK9 544 aa13.9□□□□□ -0.18
SRSF4-204ENST00000489898 HIP1O00291 1037 aa13.9□□□□□ -0.18
SRSF4-204ENST00000489898 ZNF213O14771 459 aa13.9□□□□□ -0.18
SRSF4-204ENST00000489898 KIAA0355O15063 1070 aa13.9□□□□□ -0.18
SRSF4-204ENST00000489898 SMPD1P17405 629 aa13.9□□□□□ -0.18
SRSF4-204ENST00000489898 SLC4A3P48751 1232 aa13.9□□□□□ -0.18
SRSF4-204ENST00000489898 MFAP1P55081 439 aaKnown RBP13.9□□□□□ -0.18
SRSF4-204ENST00000489898 GHRHRQ02643 423 aa13.9□□□□□ -0.18
SRSF4-204ENST00000489898 FAAP100Q0VG06 881 aa13.9□□□□□ -0.18
SRSF4-204ENST00000489898 STAG2Q8N3U4 1231 aa13.9□□□□□ -0.18
SRSF4-204ENST00000489898 SLC43A3Q8NBI5 491 aa13.9□□□□□ -0.18
SRSF4-204ENST00000489898 ZSCAN10Q96SZ4 725 aaPredicted RBP13.9□□□□□ -0.18
SRSF4-204ENST00000489898 RNF41Q9H4P4 317 aaPredicted RBP13.9□□□□□ -0.18
SRSF4-204ENST00000489898 TOMM22Q9NS69 142 aa13.9□□□□□ -0.18
SRSF4-204ENST00000489898 CUL9Q8IWT3 2517 aa13.89□□□□□ -0.19
SRSF4-204ENST00000489898 NT5C2P49902 561 aa13.89□□□□□ -0.19
SRSF4-204ENST00000489898 BAATQ14032 418 aaPredicted RBP13.89□□□□□ -0.19
SRSF4-204ENST00000489898 KCNA10Q16322 511 aa13.89□□□□□ -0.19
SRSF4-204ENST00000489898 Q7L0L9 218 aa13.89□□□□□ -0.19
SRSF4-204ENST00000489898 TBC1D5Q92609 795 aa13.89□□□□□ -0.19
SRSF4-204ENST00000489898 FAM184BQ9ULE4 1060 aa13.89□□□□□ -0.19
SRSF4-204ENST00000489898 MOXD2PA6NHM9 499 aa13.88□□□□□ -0.19
SRSF4-204ENST00000489898 RBAK-RBAKDNI3L0D1 243 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms