RNA–Protein interactions for RNA: ENST00000489583.1

APTX-229, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 397 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-229ENST00000489583 MSRAQ9UJ68 235 aa22.96■■□□□ 1.27
APTX-229ENST00000489583 PNMA2Q9UL42 364 aa22.96■■□□□ 1.27
APTX-229ENST00000489583 PRR12Q9ULL5 1215 aa22.96■■□□□ 1.27
APTX-229ENST00000489583 UNC80Q8N2C7 3258 aa22.96■■□□□ 1.27
APTX-229ENST00000489583 DYNC1LI2O43237 492 aaPredicted RBP22.95■■□□□ 1.26
APTX-229ENST00000489583 CSF2RAP15509 400 aa22.95■■□□□ 1.26
APTX-229ENST00000489583 RRP12Q5JTH9 1297 aaKnown RBP22.95■■□□□ 1.26
APTX-229ENST00000489583 ADCY6O43306 1168 aa22.94■■□□□ 1.26
APTX-229ENST00000489583 BRDTQ58F21 947 aaPredicted RBP22.94■■□□□ 1.26
APTX-229ENST00000489583 CXCL17Q6UXB2 119 aa22.94■■□□□ 1.26
APTX-229ENST00000489583 EEPD1Q7L9B9 569 aa22.94■■□□□ 1.26
APTX-229ENST00000489583 FAM126BQ8IXS8 530 aa22.94■■□□□ 1.26
APTX-229ENST00000489583 FGD4Q96M96 766 aa22.94■■□□□ 1.26
APTX-229ENST00000489583 HIPK3Q9H422 1215 aa22.94■■□□□ 1.26
APTX-229ENST00000489583 VTA1Q9NP79 307 aa22.94■■□□□ 1.26
APTX-229ENST00000489583 HELLSQ9NRZ9 838 aa22.94■■□□□ 1.26
APTX-229ENST00000489583 CYP39A1Q9NYL5 469 aa22.94■■□□□ 1.26
APTX-229ENST00000489583 Q9Y3F1 56 aa22.94■■□□□ 1.26
APTX-229ENST00000489583 PCDHB15Q9Y5E8 787 aa22.94■■□□□ 1.26
APTX-229ENST00000489583 ZNF536O15090 1300 aa22.93■■□□□ 1.26
APTX-229ENST00000489583 SOWAHBA6NEL2 793 aa22.93■■□□□ 1.26
APTX-229ENST00000489583 ICAM1P05362 532 aa22.93■■□□□ 1.26
APTX-229ENST00000489583 SNAP25P60880 206 aa22.93■■□□□ 1.26
APTX-229ENST00000489583 IRX5P78411 483 aaPredicted RBP22.93■■□□□ 1.26
APTX-229ENST00000489583 ITGA7Q13683 1181 aa22.93■■□□□ 1.26
APTX-229ENST00000489583 TMEM240Q5SV17 173 aa22.93■■□□□ 1.26
APTX-229ENST00000489583 KIAA1211Q6ZU35 1233 aa22.93■■□□□ 1.26
APTX-229ENST00000489583 OTUD7AQ8TE49 926 aaPredicted RBP22.93■■□□□ 1.26
APTX-229ENST00000489583 GPHNQ9NQX3 736 aaPredicted RBP22.93■■□□□ 1.26
APTX-229ENST00000489583 ANAPC4Q9UJX5 808 aa22.93■■□□□ 1.26
APTX-229ENST00000489583 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.93■■□□□ 1.26
APTX-229ENST00000489583 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.92■■□□□ 1.26
APTX-229ENST00000489583 B4DLN1 442 aa22.92■■□□□ 1.26
APTX-229ENST00000489583 NMT2O60551 498 aa22.92■■□□□ 1.26
APTX-229ENST00000489583 FGBP02675 491 aa22.92■■□□□ 1.26
APTX-229ENST00000489583 MRPL12P52815 198 aaKnown RBP22.92■■□□□ 1.26
APTX-229ENST00000489583 NKX3-2P78367 333 aa22.92■■□□□ 1.26
APTX-229ENST00000489583 GRIN2CQ14957 1233 aa22.92■■□□□ 1.26
APTX-229ENST00000489583 RAB30Q15771 203 aa22.92■■□□□ 1.26
APTX-229ENST00000489583 ZNF365Q70YC5 407 aa22.92■■□□□ 1.26
APTX-229ENST00000489583 KATNBL1Q9H079 304 aa22.92■■□□□ 1.26
APTX-229ENST00000489583 IL23AQ9NPF7 189 aa22.92■■□□□ 1.26
APTX-229ENST00000489583 RAD50Q92878 1312 aa22.91■■□□□ 1.26
APTX-229ENST00000489583 PTPDC1A2A3K4 754 aa22.91■■□□□ 1.26
APTX-229ENST00000489583 ORC4O43929 436 aa22.91■■□□□ 1.26
APTX-229ENST00000489583 ACRP10323 421 aa22.91■■□□□ 1.26
APTX-229ENST00000489583 TOP1P11387 765 aaKnown RBP22.91■■□□□ 1.26
APTX-229ENST00000489583 CYP2C18P33260 490 aa22.91■■□□□ 1.26
APTX-229ENST00000489583 MFAP1P55081 439 aaKnown RBP22.91■■□□□ 1.26
APTX-229ENST00000489583 MUM1L1Q5H9M0 696 aa22.91■■□□□ 1.26
APTX-229ENST00000489583 FBXO16Q8IX29 292 aaPredicted RBP22.91■■□□□ 1.26
APTX-229ENST00000489583 RPUSD2Q8IZ73 545 aaKnown RBP22.91■■□□□ 1.26
APTX-229ENST00000489583 IL17RBQ9NRM6 502 aa22.91■■□□□ 1.26
APTX-229ENST00000489583 GNEQ9Y223 722 aaKnown RBP22.91■■□□□ 1.26
APTX-229ENST00000489583 SMPD1P17405 629 aa22.9■■□□□ 1.26
APTX-229ENST00000489583 ALX1Q15699 326 aa22.9■■□□□ 1.26
APTX-229ENST00000489583 MCMDC2Q4G0Z9 681 aa22.9■■□□□ 1.26
APTX-229ENST00000489583 SYDE2Q5VT97 1194 aa22.9■■□□□ 1.26
APTX-229ENST00000489583 TICAM2Q86XR7 235 aa22.9■■□□□ 1.26
APTX-229ENST00000489583 POLR3EQ9NVU0 708 aa22.9■■□□□ 1.26
APTX-229ENST00000489583 LOC102724159A0A0B4J2E5 919 aa22.89■■□□□ 1.25
APTX-229ENST00000489583 TRIM6-TRIM34B2RNG4 842 aa22.89■■□□□ 1.25
APTX-229ENST00000489583 CD4P01730 458 aa22.89■■□□□ 1.25
APTX-229ENST00000489583 SUPT20HL2P0C7V6 817 aa22.89■■□□□ 1.25
APTX-229ENST00000489583 CPT1AP50416 773 aa22.89■■□□□ 1.25
APTX-229ENST00000489583 PWP2Q15269 919 aaKnown RBP22.89■■□□□ 1.25
APTX-229ENST00000489583 GPCPD1Q9NPB8 672 aa22.89■■□□□ 1.25
APTX-229ENST00000489583 INCENPQ9NQS7 918 aa22.89■■□□□ 1.25
APTX-229ENST00000489583 SLC16A2P36021 539 aa22.88■■□□□ 1.25
APTX-229ENST00000489583 BAATQ14032 418 aaPredicted RBP22.88■■□□□ 1.25
APTX-229ENST00000489583 MFSD6Q6ZSS7 791 aa22.88■■□□□ 1.25
APTX-229ENST00000489583 PBX4Q9BYU1 374 aa22.88■■□□□ 1.25
APTX-229ENST00000489583 WDR11Q9BZH6 1224 aa22.88■■□□□ 1.25
APTX-229ENST00000489583 RANBP17Q9H2T7 1088 aaKnown RBP22.88■■□□□ 1.25
APTX-229ENST00000489583 SLC28A3Q9HAS3 691 aa22.88■■□□□ 1.25
APTX-229ENST00000489583 PDGFCQ9NRA1 345 aa22.88■■□□□ 1.25
APTX-229ENST00000489583 MCM3APO60318 1980 aa22.88■■□□□ 1.25
APTX-229ENST00000489583 CTAGE5O15320 804 aa22.87■■□□□ 1.25
APTX-229ENST00000489583 PCP11498 1178 aaKnown RBP22.87■■□□□ 1.25
APTX-229ENST00000489583 PDE4DQ08499 809 aa22.87■■□□□ 1.25
APTX-229ENST00000489583 DUSP28Q4G0W2 176 aa22.87■■□□□ 1.25
APTX-229ENST00000489583 VPS53Q5VIR6 699 aa22.87■■□□□ 1.25
APTX-229ENST00000489583 SLC43A3Q8NBI5 491 aa22.87■■□□□ 1.25
APTX-229ENST00000489583 IL27Q8NEV9 243 aa22.87■■□□□ 1.25
APTX-229ENST00000489583 PPM1EQ8WY54 764 aa22.87■■□□□ 1.25
APTX-229ENST00000489583 HERVK_113Q902F9 699 aa22.87■■□□□ 1.25
APTX-229ENST00000489583 RNF41Q9H4P4 317 aaPredicted RBP22.87■■□□□ 1.25
APTX-229ENST00000489583 ASTN1O14525 1302 aa22.86■■□□□ 1.25
APTX-229ENST00000489583 FRMPD2Q68DX3 1309 aaPredicted RBP22.86■■□□□ 1.25
APTX-229ENST00000489583 FGAP02671 866 aa22.86■■□□□ 1.25
APTX-229ENST00000489583 CALML3P27482 149 aa22.86■■□□□ 1.25
APTX-229ENST00000489583 ALDH5A1P51649 535 aaPredicted RBP22.86■■□□□ 1.25
APTX-229ENST00000489583 PDE1AP54750 535 aa22.86■■□□□ 1.25
APTX-229ENST00000489583 CCL23P55773 120 aa22.86■■□□□ 1.25
APTX-229ENST00000489583 TAPT1Q6NXT6 567 aa22.86■■□□□ 1.25
APTX-229ENST00000489583 BTNL9Q6UXG8 535 aa22.86■■□□□ 1.25
APTX-229ENST00000489583 RNF207Q6ZRF8 634 aa22.86■■□□□ 1.25
APTX-229ENST00000489583 C16orf59Q7L2K0 433 aa22.86■■□□□ 1.25
APTX-229ENST00000489583 TTC14Q96N46 770 aa22.86■■□□□ 1.25
APTX-229ENST00000489583 TMEM47Q9BQJ4 181 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms