RNA–Protein interactions for RNA: ENST00000489283.5

PLS3-207, Transcript of plastin 3, humanhuman

TSL 1 (best)

Gene PLS3, Length 926 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLS3-207ENST00000489283 NUP133Q8WUM0 1156 aa16.54■□□□□ 0.24
PLS3-207ENST00000489283 UPF3AQ9H1J1 476 aaKnown RBP16.54■□□□□ 0.24
PLS3-207ENST00000489283 RNF41Q9H4P4 317 aaPredicted RBP16.54■□□□□ 0.24
PLS3-207ENST00000489283 GPCPD1Q9NPB8 672 aa16.54■□□□□ 0.24
PLS3-207ENST00000489283 CYP39A1Q9NYL5 469 aa16.54■□□□□ 0.24
PLS3-207ENST00000489283 DDX49Q9Y6V7 483 aaKnown RBP16.54■□□□□ 0.24
PLS3-207ENST00000489283 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.53■□□□□ 0.24
PLS3-207ENST00000489283 ASB14A6NK59 587 aa16.53■□□□□ 0.24
PLS3-207ENST00000489283 GJA9P57773 515 aa16.53■□□□□ 0.24
PLS3-207ENST00000489283 NSMFQ6X4W1 530 aa16.53■□□□□ 0.24
PLS3-207ENST00000489283 ESR2Q92731 530 aa16.53■□□□□ 0.24
PLS3-207ENST00000489283 ZKSCAN3Q9BRR0 538 aa16.53■□□□□ 0.24
PLS3-207ENST00000489283 SUPT16HQ9Y5B9 1047 aaKnown RBP16.53■□□□□ 0.24
PLS3-207ENST00000489283 HIP1O00291 1037 aa16.52■□□□□ 0.24
PLS3-207ENST00000489283 ZNF213O14771 459 aa16.52■□□□□ 0.24
PLS3-207ENST00000489283 ASGR1P07306 291 aa16.52■□□□□ 0.24
PLS3-207ENST00000489283 ITGB8P26012 769 aa16.52■□□□□ 0.24
PLS3-207ENST00000489283 ZNF543Q08ER8 600 aa16.52■□□□□ 0.24
PLS3-207ENST00000489283 C9orf50Q5SZB4 431 aa16.52■□□□□ 0.24
PLS3-207ENST00000489283 PCSK9Q8NBP7 692 aaKnown RBP16.52■□□□□ 0.24
PLS3-207ENST00000489283 TTC14Q96N46 770 aa16.52■□□□□ 0.24
PLS3-207ENST00000489283 PURBQ96QR8 312 aaKnown RBP16.52■□□□□ 0.24
PLS3-207ENST00000489283 SPC25Q9HBM1 224 aa16.52■□□□□ 0.24
PLS3-207ENST00000489283 NFIBO00712 420 aa16.51■□□□□ 0.23
PLS3-207ENST00000489283 CTAGE5O15320 804 aa16.51■□□□□ 0.23
PLS3-207ENST00000489283 SNHG28P0DPA3 235 aa16.51■□□□□ 0.23
PLS3-207ENST00000489283 TNFAIP2Q03169 654 aa16.51■□□□□ 0.23
PLS3-207ENST00000489283 SHHQ15465 462 aa16.51■□□□□ 0.23
PLS3-207ENST00000489283 ANKRD33Q7Z3H0 272 aa16.51■□□□□ 0.23
PLS3-207ENST00000489283 FBXO16Q8IX29 292 aaPredicted RBP16.51■□□□□ 0.23
PLS3-207ENST00000489283 GLT1D1Q96MS3 346 aa16.51■□□□□ 0.23
PLS3-207ENST00000489283 KIAA0355O15063 1070 aa16.5■□□□□ 0.23
PLS3-207ENST00000489283 RAG1P15918 1043 aa16.5■□□□□ 0.23
PLS3-207ENST00000489283 PDE4AP27815 886 aa16.5■□□□□ 0.23
PLS3-207ENST00000489283 BEX3Q00994 111 aa16.5■□□□□ 0.23
PLS3-207ENST00000489283 FAAP100Q0VG06 881 aa16.5■□□□□ 0.23
PLS3-207ENST00000489283 BAATQ14032 418 aaPredicted RBP16.5■□□□□ 0.23
PLS3-207ENST00000489283 GNASQ5JWF2 1037 aa16.5■□□□□ 0.23
PLS3-207ENST00000489283 NOL8Q76FK4 1167 aaKnown RBP16.5■□□□□ 0.23
PLS3-207ENST00000489283 EEPD1Q7L9B9 569 aa16.5■□□□□ 0.23
PLS3-207ENST00000489283 TLK2Q86UE8 772 aa16.5■□□□□ 0.23
PLS3-207ENST00000489283 TOX2Q96NM4 488 aa16.5■□□□□ 0.23
PLS3-207ENST00000489283 DSCC1Q9BVC3 393 aa16.5■□□□□ 0.23
PLS3-207ENST00000489283 IL25Q9H293 177 aa16.5■□□□□ 0.23
PLS3-207ENST00000489283 TMEM39AQ9NV64 488 aa16.5■□□□□ 0.23
PLS3-207ENST00000489283 GNEQ9Y223 722 aaKnown RBP16.5■□□□□ 0.23
PLS3-207ENST00000489283 ELP1O95163 1332 aa16.49■□□□□ 0.23
PLS3-207ENST00000489283 MROH7Q68CQ1 1323 aa16.49■□□□□ 0.23
PLS3-207ENST00000489283 A0A0U1RQG5 324 aaPredicted RBP16.49■□□□□ 0.23
PLS3-207ENST00000489283 PTPDC1A2A3K4 754 aa16.49■□□□□ 0.23
PLS3-207ENST00000489283 DCDC2CA8MYV0 355 aa16.49■□□□□ 0.23
PLS3-207ENST00000489283 B4E1Z4 1266 aa16.49■□□□□ 0.23
PLS3-207ENST00000489283 KDM4AO75164 1064 aa16.49■□□□□ 0.23
PLS3-207ENST00000489283 PTGS1P23219 599 aa16.49■□□□□ 0.23
PLS3-207ENST00000489283 ALDH5A1P51649 535 aaPredicted RBP16.49■□□□□ 0.23
PLS3-207ENST00000489283 NKX3-2P78367 333 aa16.49■□□□□ 0.23
PLS3-207ENST00000489283 SLC30A10Q6XR72 485 aa16.49■□□□□ 0.23
PLS3-207ENST00000489283 IQCA1Q86XH1 822 aa16.49■□□□□ 0.23
PLS3-207ENST00000489283 PDGFCQ9NRA1 345 aa16.49■□□□□ 0.23
PLS3-207ENST00000489283 MTMR10Q9NXD2 777 aa16.49■□□□□ 0.23
PLS3-207ENST00000489283 WDR19Q8NEZ3 1342 aa16.48■□□□□ 0.23
PLS3-207ENST00000489283 GOLGA8HP0CJ92 632 aa16.48■□□□□ 0.23
PLS3-207ENST00000489283 GSPT1P15170 499 aaKnown RBP16.48■□□□□ 0.23
PLS3-207ENST00000489283 SMPD1P17405 629 aa16.48■□□□□ 0.23
PLS3-207ENST00000489283 NT5C2P49902 561 aa16.48■□□□□ 0.23
PLS3-207ENST00000489283 IMMTQ16891 758 aaKnown RBP16.48■□□□□ 0.23
PLS3-207ENST00000489283 TTC22Q5TAA0 569 aa16.48■□□□□ 0.23
PLS3-207ENST00000489283 TAPT1Q6NXT6 567 aa16.48■□□□□ 0.23
PLS3-207ENST00000489283 DGKHQ86XP1 1220 aa16.48■□□□□ 0.23
PLS3-207ENST00000489283 PNMA1Q8ND90 353 aa16.48■□□□□ 0.23
PLS3-207ENST00000489283 MORC4Q8TE76 937 aa16.48■□□□□ 0.23
PLS3-207ENST00000489283 CLEC4DQ8WXI8 215 aa16.48■□□□□ 0.23
PLS3-207ENST00000489283 VTI1AQ96AJ9 217 aa16.48■□□□□ 0.23
PLS3-207ENST00000489283 CPVLQ9H3G5 476 aa16.48■□□□□ 0.23
PLS3-207ENST00000489283 VTA1Q9NP79 307 aa16.48■□□□□ 0.23
PLS3-207ENST00000489283 ADD3Q9UEY8 706 aaKnown RBP16.48■□□□□ 0.23
PLS3-207ENST00000489283 COL6A3P12111 3177 aa16.47■□□□□ 0.23
PLS3-207ENST00000489283 CALML3P27482 149 aa16.47■□□□□ 0.23
PLS3-207ENST00000489283 CDK7P50613 346 aa16.47■□□□□ 0.23
PLS3-207ENST00000489283 EPHB4P54760 987 aa16.47■□□□□ 0.23
PLS3-207ENST00000489283 IRX6P78412 446 aaPredicted RBP16.47■□□□□ 0.23
PLS3-207ENST00000489283 FPGSQ05932 587 aa16.47■□□□□ 0.23
PLS3-207ENST00000489283 FSCN1Q16658 493 aaKnown RBP16.47■□□□□ 0.23
PLS3-207ENST00000489283 TMEM63BQ5T3F8 832 aa16.47■□□□□ 0.23
PLS3-207ENST00000489283 GPATCH4Q5T3I0 446 aaKnown RBP16.47■□□□□ 0.23
PLS3-207ENST00000489283 RNF207Q6ZRF8 634 aa16.47■□□□□ 0.23
PLS3-207ENST00000489283 ZSCAN10Q96SZ4 725 aaPredicted RBP16.47■□□□□ 0.23
PLS3-207ENST00000489283 KAT14Q9H8E8 782 aa16.47■□□□□ 0.23
PLS3-207ENST00000489283 CTNNA3Q9UI47 895 aa16.47■□□□□ 0.23
PLS3-207ENST00000489283 TBX21Q9UL17 535 aa16.47■□□□□ 0.23
PLS3-207ENST00000489283 PNMA2Q9UL42 364 aa16.47■□□□□ 0.23
PLS3-207ENST00000489283 TNKSO95271 1327 aa16.46■□□□□ 0.23
PLS3-207ENST00000489283 ARVCFO00192 962 aa16.46■□□□□ 0.23
PLS3-207ENST00000489283 USH1GQ495M9 461 aa16.46■□□□□ 0.23
PLS3-207ENST00000489283 CCDC178Q5BJE1 867 aa16.46■□□□□ 0.23
PLS3-207ENST00000489283 IQSEC1Q6DN90 963 aa16.46■□□□□ 0.23
PLS3-207ENST00000489283 FAM109BQ6ICB4 259 aaPredicted RBP16.46■□□□□ 0.23
PLS3-207ENST00000489283 CXCL17Q6UXB2 119 aa16.46■□□□□ 0.23
PLS3-207ENST00000489283 FAM126BQ8IXS8 530 aa16.46■□□□□ 0.23
PLS3-207ENST00000489283 ENAHQ8N8S7 591 aaPredicted RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms