RNA–Protein interactions for RNA: ENST00000489261.1

ITSN1-231, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 1,108 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-231ENST00000489261 RTN4Q9NQC3 1192 aaKnown RBP12.28□□□□□ -0.44
ITSN1-231ENST00000489261 RMND1Q9NWS8 449 aa12.28□□□□□ -0.44
ITSN1-231ENST00000489261 GPRC5DQ9NZD1 345 aa12.28□□□□□ -0.44
ITSN1-231ENST00000489261 POLR2AP24928 1970 aaKnown RBP12.28□□□□□ -0.44
ITSN1-231ENST00000489261 FRMPD2Q68DX3 1309 aaPredicted RBP12.28□□□□□ -0.44
ITSN1-231ENST00000489261 GREB1LQ9C091 1923 aaPredicted RBP12.27□□□□□ -0.44
ITSN1-231ENST00000489261 SLC26A4O43511 780 aa12.27□□□□□ -0.45
ITSN1-231ENST00000489261 OFD1O75665 1012 aa12.27□□□□□ -0.45
ITSN1-231ENST00000489261 OR52Z1P0C646 297 aa12.27□□□□□ -0.45
ITSN1-231ENST00000489261 GCFC2P16383 781 aaKnown RBP12.27□□□□□ -0.45
ITSN1-231ENST00000489261 RPS12P25398 132 aaKnown RBP12.27□□□□□ -0.45
ITSN1-231ENST00000489261 UBA7P41226 1012 aa12.27□□□□□ -0.45
ITSN1-231ENST00000489261 ATP2B2Q01814 1243 aa12.27□□□□□ -0.45
ITSN1-231ENST00000489261 E2F4Q16254 413 aa12.27□□□□□ -0.45
ITSN1-231ENST00000489261 EAPPQ56P03 285 aaPredicted RBP12.27□□□□□ -0.45
ITSN1-231ENST00000489261 PPP4R3AQ6IN85 833 aa12.27□□□□□ -0.45
ITSN1-231ENST00000489261 BTNL9Q6UXG8 535 aa12.27□□□□□ -0.45
ITSN1-231ENST00000489261 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.27□□□□□ -0.45
ITSN1-231ENST00000489261 PDILTQ8N807 584 aa12.27□□□□□ -0.45
ITSN1-231ENST00000489261 CUL5Q93034 780 aa12.27□□□□□ -0.45
ITSN1-231ENST00000489261 CSRNP1Q96S65 589 aa12.27□□□□□ -0.45
ITSN1-231ENST00000489261 RAB34Q9BZG1 259 aa12.27□□□□□ -0.45
ITSN1-231ENST00000489261 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.27□□□□□ -0.45
ITSN1-231ENST00000489261 ARHGEF10LQ9HCE6 1279 aa12.27□□□□□ -0.45
ITSN1-231ENST00000489261 GINM1Q9NU53 330 aa12.27□□□□□ -0.45
ITSN1-231ENST00000489261 F5H6K3 240 aa12.26□□□□□ -0.45
ITSN1-231ENST00000489261 WNT7AO00755 349 aa12.26□□□□□ -0.45
ITSN1-231ENST00000489261 RAD17O75943 681 aa12.26□□□□□ -0.45
ITSN1-231ENST00000489261 ITGBL1O95965 494 aaPredicted RBP12.26□□□□□ -0.45
ITSN1-231ENST00000489261 TNNI2P48788 182 aa12.26□□□□□ -0.45
ITSN1-231ENST00000489261 CLK2P49760 499 aaKnown RBP12.26□□□□□ -0.45
ITSN1-231ENST00000489261 CACNB3P54284 484 aa12.26□□□□□ -0.45
ITSN1-231ENST00000489261 KLRC3Q07444 240 aa12.26□□□□□ -0.45
ITSN1-231ENST00000489261 DPYDQ12882 1025 aa12.26□□□□□ -0.45
ITSN1-231ENST00000489261 PDIA5Q14554 519 aa12.26□□□□□ -0.45
ITSN1-231ENST00000489261 SEPT2Q15019 361 aa12.26□□□□□ -0.45
ITSN1-231ENST00000489261 IL17AQ16552 155 aa12.26□□□□□ -0.45
ITSN1-231ENST00000489261 RRAGBQ5VZM2 374 aa12.26□□□□□ -0.45
ITSN1-231ENST00000489261 USP49Q70CQ1 688 aa12.26□□□□□ -0.45
ITSN1-231ENST00000489261 USP50Q70EL3 339 aaPredicted RBP12.26□□□□□ -0.45
ITSN1-231ENST00000489261 CCDC186Q7Z3E2 898 aa12.26□□□□□ -0.45
ITSN1-231ENST00000489261 SPC24Q8NBT2 197 aa12.26□□□□□ -0.45
ITSN1-231ENST00000489261 RASGRP4Q8TDF6 673 aa12.26□□□□□ -0.45
ITSN1-231ENST00000489261 TBCKQ8TEA7 893 aa12.26□□□□□ -0.45
ITSN1-231ENST00000489261 ZBED3Q96IU2 234 aaPredicted RBP12.26□□□□□ -0.45
ITSN1-231ENST00000489261 SH2D4AQ9H788 454 aa12.26□□□□□ -0.45
ITSN1-231ENST00000489261 PCDHAC2Q9Y5I4 1007 aa12.26□□□□□ -0.45
ITSN1-231ENST00000489261 MYH8P13535 1937 aa12.25□□□□□ -0.45
ITSN1-231ENST00000489261 ADAMTS3O15072 1205 aa12.25□□□□□ -0.45
ITSN1-231ENST00000489261 CCNT1O60563 726 aaKnown RBP12.25□□□□□ -0.45
ITSN1-231ENST00000489261 PLA2G6O60733 806 aa12.25□□□□□ -0.45
ITSN1-231ENST00000489261 GMPSP49915 693 aaPredicted RBP12.25□□□□□ -0.45
ITSN1-231ENST00000489261 USP11P51784 963 aa12.25□□□□□ -0.45
ITSN1-231ENST00000489261 TERF1P54274 439 aa12.25□□□□□ -0.45
ITSN1-231ENST00000489261 FANCCQ00597 558 aa12.25□□□□□ -0.45
ITSN1-231ENST00000489261 AMPD3Q01432 767 aa12.25□□□□□ -0.45
ITSN1-231ENST00000489261 MAP3K10Q02779 954 aa12.25□□□□□ -0.45
ITSN1-231ENST00000489261 TMEM266Q2M3C6 531 aa12.25□□□□□ -0.45
ITSN1-231ENST00000489261 LETM2Q2VYF4 491 aa12.25□□□□□ -0.45
ITSN1-231ENST00000489261 PDXDC2PQ6P474 469 aa12.25□□□□□ -0.45
ITSN1-231ENST00000489261 SIAH1Q8IUQ4 282 aa12.25□□□□□ -0.45
ITSN1-231ENST00000489261 CCDC47Q96A33 483 aaKnown RBP12.25□□□□□ -0.45
ITSN1-231ENST00000489261 COA7Q96BR5 231 aa12.25□□□□□ -0.45
ITSN1-231ENST00000489261 KLRG1Q96E93 195 aa12.25□□□□□ -0.45
ITSN1-231ENST00000489261 AMNQ9BXJ7 453 aa12.25□□□□□ -0.45
ITSN1-231ENST00000489261 CPVLQ9H3G5 476 aa12.25□□□□□ -0.45
ITSN1-231ENST00000489261 PSTPIP2Q9H939 334 aa12.25□□□□□ -0.45
ITSN1-231ENST00000489261 DISC1Q9NRI5 854 aa12.25□□□□□ -0.45
ITSN1-231ENST00000489261 CREBZFQ9NS37 354 aa12.25□□□□□ -0.45
ITSN1-231ENST00000489261 ADARB2Q9NS39 739 aaKnown RBP12.25□□□□□ -0.45
ITSN1-231ENST00000489261 BIN2Q9UBW5 565 aaPredicted RBP12.25□□□□□ -0.45
ITSN1-231ENST00000489261 A0A087X0B3 334 aa12.24□□□□□ -0.45
ITSN1-231ENST00000489261 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.24□□□□□ -0.45
ITSN1-231ENST00000489261 USP17L10C9JJH3 530 aa12.24□□□□□ -0.45
ITSN1-231ENST00000489261 FOXN1O15353 648 aa12.24□□□□□ -0.45
ITSN1-231ENST00000489261 NRDCO43847 1150 aa12.24□□□□□ -0.45
ITSN1-231ENST00000489261 FOSP01100 380 aaPredicted RBP12.24□□□□□ -0.45
ITSN1-231ENST00000489261 GH2P01242 217 aa12.24□□□□□ -0.45
ITSN1-231ENST00000489261 PRR29P0C7W0 189 aa12.24□□□□□ -0.45
ITSN1-231ENST00000489261 BMP3P12645 472 aa12.24□□□□□ -0.45
ITSN1-231ENST00000489261 PPP1R2P41236 205 aa12.24□□□□□ -0.45
ITSN1-231ENST00000489261 STAT6P42226 847 aa12.24□□□□□ -0.45
ITSN1-231ENST00000489261 FXR2P51116 673 aaKnown RBP eCLIP12.24□□□□□ -0.45
ITSN1-231ENST00000489261 AP3B2Q13367 1082 aa12.24□□□□□ -0.45
ITSN1-231ENST00000489261 KCNB1Q14721 858 aa12.24□□□□□ -0.45
ITSN1-231ENST00000489261 NOLC1Q14978 699 aaKnown RBP eCLIP12.24□□□□□ -0.45
ITSN1-231ENST00000489261 JAKMIP3Q5VZ66 844 aa12.24□□□□□ -0.45
ITSN1-231ENST00000489261 ISM2Q6H9L7 571 aa12.24□□□□□ -0.45
ITSN1-231ENST00000489261 TTBK2Q6IQ55 1244 aa12.24□□□□□ -0.45
ITSN1-231ENST00000489261 MOXD1Q6UVY6 613 aa12.24□□□□□ -0.45
ITSN1-231ENST00000489261 DPF2Q92785 391 aa12.24□□□□□ -0.45
ITSN1-231ENST00000489261 MTMR9Q96QG7 549 aa12.24□□□□□ -0.45
ITSN1-231ENST00000489261 LRRC27Q9C0I9 530 aa12.24□□□□□ -0.45
ITSN1-231ENST00000489261 TMEM60Q9H2L4 133 aa12.24□□□□□ -0.45
ITSN1-231ENST00000489261 TTC12Q9H892 705 aaPredicted RBP12.24□□□□□ -0.45
ITSN1-231ENST00000489261 GOPCQ9HD26 462 aa12.24□□□□□ -0.45
ITSN1-231ENST00000489261 SPTLC3Q9NUV7 552 aa12.24□□□□□ -0.45
ITSN1-231ENST00000489261 STK24Q9Y6E0 443 aa12.24□□□□□ -0.45
ITSN1-231ENST00000489261 TCP10L2B9ZVM9 353 aa12.23□□□□□ -0.45
ITSN1-231ENST00000489261 BMP6P22004 513 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms