RNA–Protein interactions for RNA: ENST00000489099.5

ITGB3BP-212, Transcript of integrin subunit beta 3 binding protein, humanhuman

TSL 1 (best)

Gene ITGB3BP, Length 1,285 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB3BP-212ENST00000489099 FRMPD2Q68DX3 1309 aaPredicted RBP20.53■□□□□ 0.88
ITGB3BP-212ENST00000489099 SOWAHBA6NEL2 793 aa20.52■□□□□ 0.88
ITGB3BP-212ENST00000489099 TLR3O15455 904 aaKnown RBP20.52■□□□□ 0.88
ITGB3BP-212ENST00000489099 PCP11498 1178 aaKnown RBP20.52■□□□□ 0.88
ITGB3BP-212ENST00000489099 SLC16A2P36021 539 aa20.52■□□□□ 0.88
ITGB3BP-212ENST00000489099 NOVP48745 357 aa20.52■□□□□ 0.88
ITGB3BP-212ENST00000489099 SMAD3P84022 425 aaKnown RBP20.52■□□□□ 0.88
ITGB3BP-212ENST00000489099 MUM1L1Q5H9M0 696 aa20.52■□□□□ 0.88
ITGB3BP-212ENST00000489099 SYDE2Q5VT97 1194 aa20.52■□□□□ 0.88
ITGB3BP-212ENST00000489099 MFSD6Q6ZSS7 791 aa20.52■□□□□ 0.88
ITGB3BP-212ENST00000489099 ZNF589Q86UQ0 364 aaPredicted RBP20.52■□□□□ 0.88
ITGB3BP-212ENST00000489099 TMEM47Q9BQJ4 181 aa20.52■□□□□ 0.88
ITGB3BP-212ENST00000489099 AP5M1Q9H0R1 490 aa20.52■□□□□ 0.88
ITGB3BP-212ENST00000489099 RNF41Q9H4P4 317 aaPredicted RBP20.52■□□□□ 0.88
ITGB3BP-212ENST00000489099 TCP11L1Q9NUJ3 509 aa20.52■□□□□ 0.88
ITGB3BP-212ENST00000489099 ZEB2O60315 1214 aa20.51■□□□□ 0.87
ITGB3BP-212ENST00000489099 ITGB8P26012 769 aa20.51■□□□□ 0.87
ITGB3BP-212ENST00000489099 IRX5P78411 483 aaPredicted RBP20.51■□□□□ 0.87
ITGB3BP-212ENST00000489099 AKNAD1Q5T1N1 836 aa20.51■□□□□ 0.87
ITGB3BP-212ENST00000489099 TLK2Q86UE8 772 aa20.51■□□□□ 0.87
ITGB3BP-212ENST00000489099 KATNBL1Q9H079 304 aa20.51■□□□□ 0.87
ITGB3BP-212ENST00000489099 RANBP17Q9H2T7 1088 aaKnown RBP20.51■□□□□ 0.87
ITGB3BP-212ENST00000489099 GPCPD1Q9NPB8 672 aa20.51■□□□□ 0.87
ITGB3BP-212ENST00000489099 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.5■□□□□ 0.87
ITGB3BP-212ENST00000489099 ARVCFO00192 962 aa20.5■□□□□ 0.87
ITGB3BP-212ENST00000489099 TTBK2Q6IQ55 1244 aa20.5■□□□□ 0.87
ITGB3BP-212ENST00000489099 EEPD1Q7L9B9 569 aa20.5■□□□□ 0.87
ITGB3BP-212ENST00000489099 CHD1LQ86WJ1 897 aa20.5■□□□□ 0.87
ITGB3BP-212ENST00000489099 SMC5Q8IY18 1101 aa20.5■□□□□ 0.87
ITGB3BP-212ENST00000489099 ADD3Q9UEY8 706 aaKnown RBP20.5■□□□□ 0.87
ITGB3BP-212ENST00000489099 PNMA2Q9UL42 364 aa20.5■□□□□ 0.87
ITGB3BP-212ENST00000489099 COL6A3P12111 3177 aa20.49■□□□□ 0.87
ITGB3BP-212ENST00000489099 DLL1O00548 723 aa20.49■□□□□ 0.87
ITGB3BP-212ENST00000489099 TIMP1P01033 207 aa20.49■□□□□ 0.87
ITGB3BP-212ENST00000489099 SDSP20132 328 aa20.49■□□□□ 0.87
ITGB3BP-212ENST00000489099 BEX3Q00994 111 aa20.49■□□□□ 0.87
ITGB3BP-212ENST00000489099 BTNL9Q6UXG8 535 aa20.49■□□□□ 0.87
ITGB3BP-212ENST00000489099 FBXO16Q8IX29 292 aaPredicted RBP20.49■□□□□ 0.87
ITGB3BP-212ENST00000489099 ESR2Q92731 530 aa20.49■□□□□ 0.87
ITGB3BP-212ENST00000489099 TTC14Q96N46 770 aa20.49■□□□□ 0.87
ITGB3BP-212ENST00000489099 GUCD1Q96NT3 240 aa20.49■□□□□ 0.87
ITGB3BP-212ENST00000489099 DIAPH3Q9NSV4 1193 aa20.49■□□□□ 0.87
ITGB3BP-212ENST00000489099 LCTP09848 1927 aa20.49■□□□□ 0.87
ITGB3BP-212ENST00000489099 LAMA4Q16363 1823 aa20.48■□□□□ 0.87
ITGB3BP-212ENST00000489099 PTPDC1A2A3K4 754 aa20.48■□□□□ 0.87
ITGB3BP-212ENST00000489099 ZNF213O14771 459 aa20.48■□□□□ 0.87
ITGB3BP-212ENST00000489099 CABYRO75952 493 aa20.48■□□□□ 0.87
ITGB3BP-212ENST00000489099 PDHBP11177 359 aa20.48■□□□□ 0.87
ITGB3BP-212ENST00000489099 IQSEC1Q6DN90 963 aa20.48■□□□□ 0.87
ITGB3BP-212ENST00000489099 VTA1Q9NP79 307 aa20.48■□□□□ 0.87
ITGB3BP-212ENST00000489099 HIP1O00291 1037 aa20.47■□□□□ 0.87
ITGB3BP-212ENST00000489099 DYNC1LI2O43237 492 aaPredicted RBP20.47■□□□□ 0.87
ITGB3BP-212ENST00000489099 CDK7P50613 346 aa20.47■□□□□ 0.87
ITGB3BP-212ENST00000489099 EPHB4P54760 987 aa20.47■□□□□ 0.87
ITGB3BP-212ENST00000489099 NKX3-2P78367 333 aa20.47■□□□□ 0.87
ITGB3BP-212ENST00000489099 PPIGQ13427 754 aaKnown RBP eCLIP20.47■□□□□ 0.87
ITGB3BP-212ENST00000489099 BAATQ14032 418 aaPredicted RBP20.47■□□□□ 0.87
ITGB3BP-212ENST00000489099 FSCN1Q16658 493 aaKnown RBP20.47■□□□□ 0.87
ITGB3BP-212ENST00000489099 TMEM199Q8N511 208 aa20.47■□□□□ 0.87
ITGB3BP-212ENST00000489099 MPHOSPH6Q99547 160 aaKnown RBP20.47■□□□□ 0.87
ITGB3BP-212ENST00000489099 TBX21Q9UL17 535 aa20.47■□□□□ 0.87
ITGB3BP-212ENST00000489099 GNEQ9Y223 722 aaKnown RBP20.47■□□□□ 0.87
ITGB3BP-212ENST00000489099 ASTN1O14525 1302 aa20.47■□□□□ 0.87
ITGB3BP-212ENST00000489099 SMPD1P17405 629 aa20.46■□□□□ 0.87
ITGB3BP-212ENST00000489099 NT5C2P49902 561 aa20.46■□□□□ 0.87
ITGB3BP-212ENST00000489099 NUCB1Q02818 461 aa20.46■□□□□ 0.87
ITGB3BP-212ENST00000489099 ZNF543Q08ER8 600 aa20.46■□□□□ 0.87
ITGB3BP-212ENST00000489099 MFSD5Q6N075 450 aa20.46■□□□□ 0.87
ITGB3BP-212ENST00000489099 CWC27Q6UX04 472 aaKnown RBP20.46■□□□□ 0.87
ITGB3BP-212ENST00000489099 CXCL17Q6UXB2 119 aa20.46■□□□□ 0.87
ITGB3BP-212ENST00000489099 KIAA1211Q6ZU35 1233 aa20.46■□□□□ 0.87
ITGB3BP-212ENST00000489099 IQCA1Q86XH1 822 aa20.46■□□□□ 0.87
ITGB3BP-212ENST00000489099 TBC1D10CQ8IV04 446 aa20.46■□□□□ 0.87
ITGB3BP-212ENST00000489099 PLEKHM2Q8IWE5 1019 aa20.46■□□□□ 0.87
ITGB3BP-212ENST00000489099 FAM126BQ8IXS8 530 aa20.46■□□□□ 0.87
ITGB3BP-212ENST00000489099 SEMA6BQ9H3T3 888 aa20.46■□□□□ 0.87
ITGB3BP-212ENST00000489099 OSBPL3Q9H4L5 887 aa20.46■□□□□ 0.87
ITGB3BP-212ENST00000489099 PDGFCQ9NRA1 345 aa20.46■□□□□ 0.87
ITGB3BP-212ENST00000489099 Q9Y3F1 56 aa20.46■□□□□ 0.87
ITGB3BP-212ENST00000489099 LOC102724159A0A0B4J2E5 919 aa20.45■□□□□ 0.86
ITGB3BP-212ENST00000489099 NFIBO00712 420 aa20.45■□□□□ 0.86
ITGB3BP-212ENST00000489099 CTAGE5O15320 804 aa20.45■□□□□ 0.86
ITGB3BP-212ENST00000489099 CALML3P27482 149 aa20.45■□□□□ 0.86
ITGB3BP-212ENST00000489099 ALDH5A1P51649 535 aaPredicted RBP20.45■□□□□ 0.86
ITGB3BP-212ENST00000489099 PWP2Q15269 919 aaKnown RBP20.45■□□□□ 0.86
ITGB3BP-212ENST00000489099 CCDC178Q5BJE1 867 aa20.45■□□□□ 0.86
ITGB3BP-212ENST00000489099 GPATCH4Q5T3I0 446 aaKnown RBP20.45■□□□□ 0.86
ITGB3BP-212ENST00000489099 SEZ6LQ9BYH1 1024 aa20.45■□□□□ 0.86
ITGB3BP-212ENST00000489099 PPP1R12CQ9BZL4 782 aa20.45■□□□□ 0.86
ITGB3BP-212ENST00000489099 DDX49Q9Y6V7 483 aaKnown RBP20.45■□□□□ 0.86
ITGB3BP-212ENST00000489099 NEDD4P46934 1319 aa20.45■□□□□ 0.86
ITGB3BP-212ENST00000489099 TMEM265A0A087WTH1 108 aa20.44■□□□□ 0.86
ITGB3BP-212ENST00000489099 IGHDP01880 384 aa20.44■□□□□ 0.86
ITGB3BP-212ENST00000489099 ITGA7Q13683 1181 aa20.44■□□□□ 0.86
ITGB3BP-212ENST00000489099 TAPT1Q6NXT6 567 aa20.44■□□□□ 0.86
ITGB3BP-212ENST00000489099 RNF207Q6ZRF8 634 aa20.44■□□□□ 0.86
ITGB3BP-212ENST00000489099 MORC4Q8TE76 937 aa20.44■□□□□ 0.86
ITGB3BP-212ENST00000489099 PURBQ96QR8 312 aaKnown RBP20.44■□□□□ 0.86
ITGB3BP-212ENST00000489099 CDX2Q99626 313 aaPredicted RBP20.44■□□□□ 0.86
ITGB3BP-212ENST00000489099 ZKSCAN3Q9BRR0 538 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms