RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 PRDM5Q9NQX1 630 aaPredicted RBP10.64□□□□□ -0.71
HDAC6-232ENST00000489053 CYP39A1Q9NYL5 469 aa10.64□□□□□ -0.71
HDAC6-232ENST00000489053 RBM8AQ9Y5S9 174 aaKnown RBP10.64□□□□□ -0.71
HDAC6-232ENST00000489053 ABCB11O95342 1321 aa10.63□□□□□ -0.71
HDAC6-232ENST00000489053 WDR19Q8NEZ3 1342 aa10.63□□□□□ -0.71
HDAC6-232ENST00000489053 E7EWF7 191 aa10.63□□□□□ -0.71
HDAC6-232ENST00000489053 ZEB2O60315 1214 aa10.63□□□□□ -0.71
HDAC6-232ENST00000489053 DUSP11O75319 330 aaKnown RBP10.63□□□□□ -0.71
HDAC6-232ENST00000489053 CDC45O75419 566 aa10.63□□□□□ -0.71
HDAC6-232ENST00000489053 SNAI1O95863 264 aaPredicted RBP10.63□□□□□ -0.71
HDAC6-232ENST00000489053 CENPBP07199 599 aaPredicted RBP10.63□□□□□ -0.71
HDAC6-232ENST00000489053 CYP21A2P08686 494 aa10.63□□□□□ -0.71
HDAC6-232ENST00000489053 C6orf222P0C671 652 aaPredicted RBP10.63□□□□□ -0.71
HDAC6-232ENST00000489053 ZNF865P0CJ78 1059 aaPredicted RBP10.63□□□□□ -0.71
HDAC6-232ENST00000489053 SNHG28P0DPA3 235 aa10.63□□□□□ -0.71
HDAC6-232ENST00000489053 COL6A1P12109 1028 aa10.63□□□□□ -0.71
HDAC6-232ENST00000489053 RTP1P59025 263 aa10.63□□□□□ -0.71
HDAC6-232ENST00000489053 BAATQ14032 418 aaPredicted RBP10.63□□□□□ -0.71
HDAC6-232ENST00000489053 CDC37Q16543 378 aaPredicted RBP10.63□□□□□ -0.71
HDAC6-232ENST00000489053 LRRC26Q2I0M4 334 aa10.63□□□□□ -0.71
HDAC6-232ENST00000489053 CCDC144BQ3MJ40 725 aa10.63□□□□□ -0.71
HDAC6-232ENST00000489053 BRDTQ58F21 947 aaPredicted RBP10.63□□□□□ -0.71
HDAC6-232ENST00000489053 FBXO11Q86XK2 927 aa10.63□□□□□ -0.71
HDAC6-232ENST00000489053 FAM133AQ8N9E0 248 aa10.63□□□□□ -0.71
HDAC6-232ENST00000489053 PCSK9Q8NBP7 692 aaKnown RBP10.63□□□□□ -0.71
HDAC6-232ENST00000489053 ANKS1AQ92625 1134 aa10.63□□□□□ -0.71
HDAC6-232ENST00000489053 ESYT1Q9BSJ8 1104 aa10.63□□□□□ -0.71
HDAC6-232ENST00000489053 UBE2OQ9C0C9 1292 aaKnown RBP10.63□□□□□ -0.71
HDAC6-232ENST00000489053 IL25Q9H293 177 aa10.63□□□□□ -0.71
HDAC6-232ENST00000489053 MRPL11Q9Y3B7 192 aaKnown RBP10.63□□□□□ -0.71
HDAC6-232ENST00000489053 DNAH12Q6ZR08 3092 aa10.63□□□□□ -0.71
HDAC6-232ENST00000489053 TRIOBPQ9H2D6 2365 aa10.62□□□□□ -0.71
HDAC6-232ENST00000489053 RLFQ13129 1914 aa10.62□□□□□ -0.71
HDAC6-232ENST00000489053 CCDC69A6NI79 296 aa10.62□□□□□ -0.71
HDAC6-232ENST00000489053 KLRF2D3W0D1 207 aa10.62□□□□□ -0.71
HDAC6-232ENST00000489053 NFIBO00712 420 aa10.62□□□□□ -0.71
HDAC6-232ENST00000489053 KIF5BP33176 963 aa10.62□□□□□ -0.71
HDAC6-232ENST00000489053 MCM5P33992 734 aa10.62□□□□□ -0.71
HDAC6-232ENST00000489053 MNX1P50219 401 aaPredicted RBP10.62□□□□□ -0.71
HDAC6-232ENST00000489053 FGD1P98174 961 aa10.62□□□□□ -0.71
HDAC6-232ENST00000489053 TNFAIP2Q03169 654 aa10.62□□□□□ -0.71
HDAC6-232ENST00000489053 GNASQ5JWF2 1037 aa10.62□□□□□ -0.71
HDAC6-232ENST00000489053 EEPD1Q7L9B9 569 aa10.62□□□□□ -0.71
HDAC6-232ENST00000489053 HOMER1Q86YM7 354 aa10.62□□□□□ -0.71
HDAC6-232ENST00000489053 ADGRF4Q8IZF3 695 aa10.62□□□□□ -0.71
HDAC6-232ENST00000489053 CTCFLQ8NI51 663 aaPredicted RBP10.62□□□□□ -0.71
HDAC6-232ENST00000489053 MAP4K1Q92918 833 aa10.62□□□□□ -0.71
HDAC6-232ENST00000489053 LENG1Q96BZ8 264 aaPredicted RBP10.62□□□□□ -0.71
HDAC6-232ENST00000489053 GLT1D1Q96MS3 346 aa10.62□□□□□ -0.71
HDAC6-232ENST00000489053 TSEN34Q9BSV6 310 aaKnown RBP10.62□□□□□ -0.71
HDAC6-232ENST00000489053 CPVLQ9H3G5 476 aa10.62□□□□□ -0.71
HDAC6-232ENST00000489053 VTA1Q9NP79 307 aa10.62□□□□□ -0.71
HDAC6-232ENST00000489053 STARD7Q9NQZ5 370 aa10.62□□□□□ -0.71
HDAC6-232ENST00000489053 RANBP2P49792 3224 aaKnown RBP10.62□□□□□ -0.71
HDAC6-232ENST00000489053 SYNRGQ9UMZ2 1314 aa10.61□□□□□ -0.71
HDAC6-232ENST00000489053 LOC102724159A0A0B4J2E5 919 aa10.61□□□□□ -0.71
HDAC6-232ENST00000489053 MOXD2PA6NHM9 499 aa10.61□□□□□ -0.71
HDAC6-232ENST00000489053 PRC1O43663 620 aa10.61□□□□□ -0.71
HDAC6-232ENST00000489053 PQBP1O60828 265 aaKnown RBP10.61□□□□□ -0.71
HDAC6-232ENST00000489053 IGHA2P01877 340 aa10.61□□□□□ -0.71
HDAC6-232ENST00000489053 PWP2Q15269 919 aaKnown RBP10.61□□□□□ -0.71
HDAC6-232ENST00000489053 SLC30A10Q6XR72 485 aa10.61□□□□□ -0.71
HDAC6-232ENST00000489053 SLC39A5Q6ZMH5 540 aa10.61□□□□□ -0.71
HDAC6-232ENST00000489053 SYNE3Q6ZMZ3 975 aa10.61□□□□□ -0.71
HDAC6-232ENST00000489053 CYB5R4Q7L1T6 521 aa10.61□□□□□ -0.71
HDAC6-232ENST00000489053 CHST3Q7LGC8 479 aa10.61□□□□□ -0.71
HDAC6-232ENST00000489053 FBXO16Q8IX29 292 aaPredicted RBP10.61□□□□□ -0.71
HDAC6-232ENST00000489053 AMNQ9BXJ7 453 aa10.61□□□□□ -0.71
HDAC6-232ENST00000489053 RBM27Q9P2N5 1060 aaKnown RBP10.61□□□□□ -0.71
HDAC6-232ENST00000489053 SEC63Q9UGP8 760 aaKnown RBP10.61□□□□□ -0.71
HDAC6-232ENST00000489053 PHF24Q9UPV7 400 aa10.61□□□□□ -0.71
HDAC6-232ENST00000489053 COL11A1P12107 1806 aaPredicted RBP10.61□□□□□ -0.71
HDAC6-232ENST00000489053 A0A1W2PPC1 479 aa10.6□□□□□ -0.71
HDAC6-232ENST00000489053 A0A1W2PQ45 241 aaPredicted RBP10.6□□□□□ -0.71
HDAC6-232ENST00000489053 A0A1W2PQY0 241 aa10.6□□□□□ -0.71
HDAC6-232ENST00000489053 SOWAHBA6NEL2 793 aa10.6□□□□□ -0.71
HDAC6-232ENST00000489053 DCDC2CA8MYV0 355 aa10.6□□□□□ -0.71
HDAC6-232ENST00000489053 MAGEA10P43363 369 aaPredicted RBP10.6□□□□□ -0.71
HDAC6-232ENST00000489053 ALDH5A1P51649 535 aaPredicted RBP10.6□□□□□ -0.71
HDAC6-232ENST00000489053 ACLYP53396 1101 aa10.6□□□□□ -0.71
HDAC6-232ENST00000489053 RPS6P62753 249 aaKnown RBP10.6□□□□□ -0.71
HDAC6-232ENST00000489053 MDM2Q00987 491 aaPredicted RBP10.6□□□□□ -0.71
HDAC6-232ENST00000489053 PPP2R5BQ15173 497 aa10.6□□□□□ -0.71
HDAC6-232ENST00000489053 KCNA10Q16322 511 aa10.6□□□□□ -0.71
HDAC6-232ENST00000489053 QRICH1Q2TAL8 776 aa10.6□□□□□ -0.71
HDAC6-232ENST00000489053 TRIM60Q495X7 471 aa10.6□□□□□ -0.71
HDAC6-232ENST00000489053 IQSEC1Q6DN90 963 aa10.6□□□□□ -0.71
HDAC6-232ENST00000489053 TLK2Q86UE8 772 aa10.6□□□□□ -0.71
HDAC6-232ENST00000489053 TMTC2Q8N394 836 aa10.6□□□□□ -0.71
HDAC6-232ENST00000489053 DNERQ8NFT8 737 aa10.6□□□□□ -0.71
HDAC6-232ENST00000489053 GPHNQ9NQX3 736 aaPredicted RBP10.6□□□□□ -0.71
HDAC6-232ENST00000489053 PCDHA1Q9Y5I3 950 aa10.6□□□□□ -0.71
HDAC6-232ENST00000489053 MROH7Q68CQ1 1323 aa10.59□□□□□ -0.71
HDAC6-232ENST00000489053 PARP14Q460N5 1801 aa10.59□□□□□ -0.71
HDAC6-232ENST00000489053 SLC27A2O14975 620 aa10.59□□□□□ -0.71
HDAC6-232ENST00000489053 ZBTB5O15062 677 aa10.59□□□□□ -0.71
HDAC6-232ENST00000489053 TLR3O15455 904 aaKnown RBP10.59□□□□□ -0.71
HDAC6-232ENST00000489053 DYNC1LI2O43237 492 aaPredicted RBP10.59□□□□□ -0.71
HDAC6-232ENST00000489053 CFBP00751 764 aa10.59□□□□□ -0.71
HDAC6-232ENST00000489053 CALM1P0DP23 149 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms